Carassius gibelio (silver crucian carp): 128014854
Help
Entry
128014854 CDS
T08819
Name
(RefSeq) tenascin-like
KO
K06252
tenascin
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04510
Focal adhesion
cgib04512
ECM-receptor interaction
cgib04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128014854
04518 Integrin signaling
128014854
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128014854
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cgib00536
]
128014854
Glycosaminoglycan binding proteins [BR:
cgib00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
128014854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_TEN
fn3
EGF_Teneurin
Fibrinogen_C
EGF_2
EGF_Tenascin
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_3rd
Fn3_Dep-1_2nd
Pur_ac_phosph_N
DUF7949
EGF
NDNF
Fn3_VIN3
hEGF
Big_5
Motif
Other DBs
NCBI-GeneID:
128014854
NCBI-ProteinID:
XP_052454498
LinkDB
All DBs
Position
A5:37585454..37642783
Genome browser
AA seq
1537 aa
AA seq
DB search
MGSGGLTFSCLVLATLMTLNHAGLVKKMIRHRREALTIPGIHNVTLPSSSQPVVFNHVYN
IKVPGSSLCSVDLDSSLGSDLEQKDAPSGSEETDHTLDGGNQIVFTHRINVPKQACGCTE
GLPHLKELLNRLEMLEGEMLTLREHCAKETTCCSIQATGDVGTKPFCSGRGNYSTEACGC
ICEPGWKGPNCTIPDCPRDCNDQGRCINGKCECFAGFTGADCSEETCLVDCGENGRCING
ACVCNEEFSGDDCTETDCLNNCLGHGRCVESECVCDEHWTGFDCSELICPHDCYDRGRCD
NGTCYCDKGYTGEDCGALACSNDCSGRGFCIDGRCVCDAGYSGEDCSRLTCPNDCNQRGR
CFNGMCICETGYFGEDCGKLSCPDSCNGRGRCIDGRCECDVGFKGHDCSEFSCPNDCNKR
GRCVNGQCVCEEGFGGEDCSVKTCKSDCYGQGQCVDGKCICFANFAGEDCSELSCPSNCL
NRGRCVTGQCVCDEGFTGEDCGQRKCPNDCLSRGRCMEGQCICQEGFEGLDCSVPTCPGN
CNNHGRCFNGKCVCDEGFAGDVCGERSCPNDCNGAGQCLDGRCVCDEGYIGKDCSEVSPP
EDLTITDVTTEKVNLSWKNEMLVTEYLVTHVPTSPGGRQLDFHVPGDRTSATVSELEPGI
EYFISVYAILNNKKSIPVSTRVSTYLPQPEGLKFKSISDTSVEVLWDQLDFPFDAWELIF
RNKKEENGKIVNNLTPSQTNFEQPGLVPGQEYEVTLSVIKNNTRGPETSSTVVTRIDSPG
QIDVGDVTDRSAVVSWSRPVAQVDGFRVSYGPSTDPLVHRDVDLLATDTQYSLEDLEPDT
EYRVSLSSKRGDVSSEPIFESFITGLDAPTDLRAVNQTDNSITLEWKNSRSSIDGYRIKY
SPIKGGVHGEDMFPKRAGDTTWATITGLKPGTEYGIGVTAIQNERESEPATTNTLTDLDR
PRDLEVRDSTETTLELVWKRPRAKISIYKLAFVSADGRREEVELPASTTGYTLSSLSPGV
HYTITLVAERGRRRSAPVTVTASTGLGALRDLGFSDITDTTAVVSWTRPRSQPDSHRITY
ISIQGGAPVMLTADGSQSQVSLMNLIPGETYQVSVVAVKGLEESEPVSNTFTTALDAARG
LIAVNVTDTKALLLWQPAVATVDGYVITYSADTVPQISEQVSGNTVEFEMSSLAPATHYT
VNVYAIRNREKSAPATTDFSTDVDAPRDLVASNIQTDSAVLSWTPPRAAITAYILTFEPS
DGDVRELNLDLSVTSHALSDLRSSTEHTVRLQAVSEDKRSTQTSSVFSTAGMRFRNTKDC
SEALLNGETSSGPYTIYISGDEKQPVRVYCDMSTDGGGWMVFVRRQSGKLDFYRNWRNYS
AGFGDTSDEFWLGLSNLHRITSAGQYELRVDLRDGQESVFAVYDTFYIADPRSRYKILIG
AYSGTAGDSLSYHQNRPFSTYDNDNDIAVTNCALSYKGAFWYKNCHRVNLMGKYGDSSHS
KGINWFHWKGHEHSIPFAEMKIRPVNFRNLEGRRTRT
NT seq
4614 nt
NT seq
+upstream
nt +downstream
nt
atgggttcaggaggcctgacattcagctgtttggttttggcaaccctgatgactttaaat
catgccggcctggtaaagaagatgatcagacaccggcgggaagctctgacgattcccggc
atacacaacgtaacccttccaagctcttctcaaccggtcgtttttaaccatgtctacaac
atcaaagttcccggtagctctctgtgctcagtggatctggactcttctctcggttcggat
cttgagcagaaggatgctccatctggctcagaagaaacagatcacacgttagatggtggt
aatcagatcgtctttacccatcgcatcaacgtccccaagcaggcgtgtggctgtacggag
ggactgccgcacctgaaggagctcctgaatcggctggagatgttggagggcgagatgttg
acactcagagagcactgcgccaaagaaaccacctgctgcagcattcaggccacaggtgat
gtaggaacgaagcctttctgcagcggccgtggaaactacagcacggaggcctgcggctgt
atatgtgagcccggatggaagggccccaactgcaccattcccgactgtcccagagattgc
aatgaccagggccgctgcattaacggaaagtgtgagtgtttcgctggcttcacgggtgcg
gactgtagcgaggagacctgtctggttgactgcggtgagaacggacgttgcatcaatgga
gcatgtgtttgcaatgaagaattctctggggatgattgcacggagacggattgtctcaac
aactgtttgggacacggccgctgcgttgaaagtgagtgtgtttgcgacgagcactggact
ggattcgattgctctgagctaatctgtccgcatgactgctacgaccgtggacgatgtgac
aacgggacttgttattgtgataaaggctacaccggagaggactgcggggcactcgcttgt
tcaaacgactgctcgggacgaggtttttgtattgacggccgctgtgtgtgcgacgccggc
tactccggtgaggattgttcaaggttgacctgtccaaatgactgcaaccaaagagggcga
tgtttcaacggcatgtgcatttgtgaaacaggttatttcggagaggactgcgggaagctc
tcctgcccggatagctgcaatggtagagggcgctgcattgatggtcgttgcgaatgtgac
gtcggatttaaaggtcatgattgttcagagtttagctgccccaatgattgtaacaaacga
gggcgctgcgttaacggccagtgtgtttgtgaagagggatttggtggcgaggactgcagc
gtcaaaacttgcaagtcagactgctatggccaaggccagtgtgtggatgggaaatgcatt
tgctttgcaaactttgccggcgaagactgcagtgaattgagctgcccgagcaactgcctg
aaccgtggacgttgcgtcacagggcaatgcgtttgcgacgaaggcttcactggagaggac
tgcggtcagaggaagtgtccaaacgactgcctcagccgtggacgatgcatggagggacag
tgcatttgccaggagggttttgagggcctggattgctccgttcccacctgtcctggaaac
tgcaataatcatgggcgctgtttcaatgggaaatgtgtgtgtgatgagggattcgctggt
gatgtctgtggagaacgaagctgtccgaatgattgcaatggtgcggggcaatgtttggac
ggccgctgtgtatgcgatgaaggctacattggaaaggattgctcagaagtctcaccaccg
gaggacctgaccattacagatgtgaccacagagaaggtgaacctctcctggaagaacgag
atgctggtgacggagtatttggttacacacgtcccaacgtcaccaggcggccggcagttg
gacttccatgtgcctggagatcgtacgtctgctaccgtctctgagctggagccgggaatc
gagtatttcatcagcgtttatgccatcctcaacaacaagaagagcattcctgtcagcacc
agagtgtccacatatctaccgcagcccgagggcctgaagtttaaatccatcagtgatacg
tctgtggaggttttgtgggaccagctggactttccatttgacgcctgggagctcatcttt
cgtaacaagaaagaagaaaacgggaagattgtgaacaatctgacaccttcccaaaccaac
tttgagcagccgggactcgtccccggccaggaatatgaagtcactttgtccgtcattaag
aacaacaccagaggacccgaaaccagctccactgtagtaacaagaatcgattctccgggg
cagattgatgttggcgatgtgacagaccggtctgcagtggtctcctggtccaggcctgtg
gctcaggtggacgggttcagggtgtcgtacgggccgagcactgacccattagtccatcga
gatgtcgacctcctggccacagacacacagtacagcctggaagacctggaaccagacact
gaatacagagtgtctctcagttcaaagaggggagacgtgagcagcgagcccatctttgag
agcttcatcacgggtctggatgcccccactgacctcagagctgttaaccagactgacaac
agcatcacactggaatggaaaaacagccgttcatccatcgacggataccgtatcaagtac
agtccgatcaaaggaggtgttcatggtgaagacatgttccctaaaagagcaggagacaca
acatgggctacaattacaggcctgaagcctggaacggagtacggtattggagtcacagcc
attcagaacgaaagagagagtgagccagcgaccacaaacacactgaccgatctggatcgt
ccacgagacttggaagtgcgagactccaccgaaaccaccctggaactggtctggaagagg
cccagggccaagatctccatctacaagctagcgtttgtctctgccgacggccgacgggaa
gaagtcgagctgcctgctagcacaaccggctacaccctgagcagcttgagccctggcgtg
cactacaccatcaccctcgtggcagaacgcggacggaggagaagtgctcctgtcaccgtc
accgcatccacaggccttggagctctacgggaccttggtttctccgacatcacggacaca
acggctgtagtttcctggactcgacctcgatcccaaccagactcccacagaatcacttac
atctccatccaaggaggtgctcctgtgatgttgacggcggacgggtcacagtctcaggtt
tccctgatgaatctgattcctggagagacgtatcaggtgtcagttgttgcagtgaaaggt
ctggaggagagcgaaccagtgtccaacactttcactacagccctggatgcagcacgtggc
ctgattgctgtcaatgtcaccgacacaaaggcactgttgctgtggcaacctgccgtggcg
accgtggatggatatgtgatcacatacagcgcagacactgtgccacagatatcagagcag
gtttctgggaacacggttgagtttgagatgagttcactggctccagcaactcattacact
gttaatgtgtatgccatcagaaacagggagaaaagtgctccagcgaccacagacttcagc
acagatgtggacgctccgcgtgatctggttgccagtaatattcagacagacagcgccgtt
ctcagctggacgccgccgcgggccgccatcaccgcatacatcctgacctttgaaccatct
gacggggatgtcagggagctgaatctggatctgtctgtgacctcacacgctctgtctgat
ctgaggagcagcactgaacacacagttcgactgcaggccgtctctgaggacaagaggagc
acacagaccagctccgtcttcagcacagctggcatgcgcttcaggaacaccaaggactgc
tcagaagctctgctgaacggagagacttcctccggtccgtacaccatttacatcagcgga
gacgagaagcagcccgtccgagtttactgtgacatgagcaccgacggcggtggctggatg
gtgttcgttcggcgtcagagcggaaagctggatttctacaggaactggaggaactactct
gcaggattcggtgacacgagcgatgagttctggctcggactttcaaatcttcacagaatc
acctcagcaggtcagtacgagctgcgcgtggacctgcgtgacggacaggagagtgtgttt
gcagtctacgatacattttacatcgcagatcctcgttcccgctacaagatcctgattggt
gcatacagtggcaccgcaggtgattcattgtcatatcaccagaacagacccttctccacc
tatgacaatgacaatgacattgcggtcaccaactgtgccctgtcctacaagggagcgttc
tggtataaaaactgccaccgagtgaacctgatggggaaatatggagacagcagtcacagc
aaagggatcaactggttccactggaaaggccatgagcattcgattccattcgcggagatg
aagatccggccagtcaatttcagaaacttggaaggcagacggacaagaacatag
DBGET
integrated database retrieval system