Carassius gibelio (silver crucian carp): 128014925
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Entry
128014925 CDS
T08819
Name
(RefSeq) NLR family CARD domain-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cgib04054
]
128014925
Pattern recognition receptors [BR:
cgib04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
128014925
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
PRY
NOD2_WH
LRR_6
SPRY
DUF6712
Defensin_3
LRR_4
Motif
Other DBs
NCBI-GeneID:
128014925
NCBI-ProteinID:
XP_052454597
LinkDB
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Position
A5:39467789..39483554
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AA seq
1118 aa
AA seq
DB search
MSRCEEREEEDAVQTQTVPSPDSSCVSMKSDGSMAKPPAFSDGGGVSNSRHHTQTAASLV
SSCVSMKSDGSMAKPPAFSNGVGVSNSRHVSSCVSMKSDGSMAKPPTFSDEAGVSNSRHH
SQTAASPVFNCVSMKSDGFMAKPPFFRHGTGVSNSRCFFPAHSSTERKLRDVKSCLICAA
FYSENHIRQHYAEPALYTQVEETRDLEQDSRQLVDDVLQRVKEKHKTIMKGKYESLFEGI
KLQENETLLNSIYTQLYIIEGESEAVNEEHEVLQMEKTPRIQQLQDTPIKCNDIFDPLPE
PGYKNNKRMRKDRIKTVLTKGIAGIGKTVSVQKFILDWAEGKANQDVDFMFVLPFRELNL
FKDNQYSLHRLLLDFHPGLQDLDPKVYDLCKVVLVFDGLDESKIKLEWSDSEKVCDVAET
SSLGVLMSNLIKGDLLPSALIWITSRPAAANQIPSKYIHRLTEIQGFNDPQKEEYFRKRI
SDQHQARRIISHIKAARSLHIMCYIPVFCWISATVLQNIMKRDDCAEVPKTLTEMYIHFL
IIQTNIRNQKYDERDERDPQKLLQSNRGVIVKLAELAFKQLMRGNIMFYEEDLRECGIEV
TEASVYSGICTEIFKEEYVINQRKVYCFIHLSFQEFLAAFYVFYSYVNNTSDALKVFDLL
HNLHKGVLDKALKNENGRMDLFLRFLLGISLESNQKLLHGLLTHTENSSESINETIKYVK
DKIKEWKNTLSAERSINLFLCLLEMNDQTLQREILEFLKSDKHSEKELSAAHCSAIAYIL
QISEEALDELDLKKYNTSEEGRRRLIPAVRNCRKAFLADCNITDQSCETVASALQLSDSP
LRELDLSNNDLQDSGVKLLSTGLKSPNCRLQILRLSGCMVTQEGCSYLASALSSNPSHLR
ELDLSYNYPGDSGVKVLSDSLSHSNCKLNLDHGGHFRITPGLHKYTCNLTLDINTANNHL
SLSEENRKVTRVEEELPYPSHPERFDCFEQVLCTESLCKRHYWEAEWSVRGAGLSVTYKG
IQRTGSDCRFGLNEMSWSLICFDNKYSAWHSNNRTNLPAPSPPSKRVGVYLDWPAGELSF
YSVSDTHTLIHLHTYHSTFIEPLYAGFRLYPDSSVSLY
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctgtgaggagagagaggaggaggatgctgttcagacccagacagtaccatct
ccagactctagctgtgtgtctatgaagagtgacggctccatggccaaaccccctgctttt
agtgatggagggggagtctctaattcgagacaccacactcagacggcagcatctcttgtt
tctagctgtgtgtctatgaagagcgacggctccatggccaaacctcctgcctttagtaat
ggagtaggagtctctaattctagacacgtttctagctgtgtatctatgaagagtgacggc
tccatggccaaacctcccacctttagtgatgaagcaggagtctctaattctagacaccac
tctcagacggcagcatctccagtttttaactgtgtctctatgaagagcgacggcttcatg
gccaaacctcctttctttaggcatggaacgggagtctctaattcaagatgtttttttcct
gctcacagctccactgagaggaagctcagagatgtgaagtcctgtctgatttgtgctgcg
ttctactccgagaaccacatcagacagcactatgcagaaccagccctctacacacaggtg
gaggagactagagacctggagcaggattcacgacaactagtggatgatgtcttgcagaga
gttaaagagaaacacaaaaccatcatgaaagggaagtatgagagcttatttgaaggtatc
aagctacaagagaatgaaaccctcttgaacagcatctacacacagctctacatcatagag
ggagagagcgaagcagtgaatgaagagcatgaggttttacagatggagaaaacacccaga
atacaacaattacaagacactccgatcaaatgtaatgacatttttgaccccttacctgaa
ccaggctataagaataataaaagaatgaggaaagaccgaatcaagactgttcttactaaa
ggcatcgctggaatcggaaaaaccgtctctgtgcagaagtttattctcgactgggctgag
ggaaaagccaatcaggatgtagatttcatgtttgtgcttccatttcgagagctgaacttg
tttaaagataatcagtacagtcttcacagacttctgctggactttcatcctggacttcaa
gatctggacccaaaggtatatgatttatgtaaagttgtgttagtttttgatggtctggat
gaaagcaaaattaaacttgagtggtcagacagtgagaaagtttgtgatgtggctgagact
tcatcattgggtgtgttgatgtcaaacctcattaaaggggatctgcttccatctgctctc
atctggatcacctccagaccagcagcagccaatcagatcccctccaaatacatccaccgt
ctgacagaaattcagggattcaatgaccctcagaaagaggagtatttcaggaagagaatc
agtgaccagcatcaagccagaagaattatctcacacattaaagcagcaagaagcctccac
atcatgtgttacataccagtcttctgctggatctcagccactgtgcttcaaaacatcatg
aaacgagatgactgtgcagaagtccccaaaactctgactgaaatgtacatacacttcttg
attattcagacaaatataagaaatcagaagtatgatgagagagacgagagagatccacag
aaactcctgcagtcaaacaggggagtgattgtgaaacttgctgaactggctttcaaacag
ctgatgcgtggaaatatcatgttctatgaggaggacctgagagaatgtggcatagaggtc
actgaggcttctgtgtattctgggatttgcactgagatctttaaagaagaatatgtgatt
aatcagaggaaagtctactgctttatacacctgagttttcaggagtttcttgcagcattt
tatgtcttttactcctatgtaaataacacttctgatgccttgaaagtttttgatttactt
cataatttgcataaaggagtactggataaagctcttaagaatgagaatggacgcatggat
cttttcctccggttcctgctgggcatctcacttgagtccaatcagaaactgttacatgga
ctactgacacacacagagaacagttcagagagcatcaatgaaactataaagtacgtcaag
gacaaaatcaaagaatggaaaaatactctttctgctgaaagatcaatcaatctgttcctc
tgtctgcttgaaatgaacgatcagactctgcaaagagaaatcctggagtttctgaaatca
gacaaacactcagaaaaagaactgtctgctgcgcactgctcagccatagcctacatactt
cagatatcagaggaggcactggatgagctggaccttaaaaaatacaacacatcagaggaa
ggtagaaggagactgataccagctgtgagaaactgcagaaaagcttttcttgcagactgc
aatatcactgatcagtcctgtgaaactgtggcctcagctctgcaattatcagactctccc
ctgagagagctggacctgagtaacaatgacctgcaggattcaggagtgaagctgctctct
actggactaaagagtccaaactgtcgactgcagatactgagattgtctggctgtatggtg
acacaggaaggctgttcatatctggcttcggctctgagttctaacccctcacacctgaga
gagctggatttgagctacaattacccaggagattctggagtgaaggtgctctctgacagc
ctgagccattcaaactgcaaactcaatttggaccatggaggacatttcagaatcacacca
ggactacacaaatatacctgtaatctcacacttgacataaacactgcaaacaaccatctc
tctctgtctgaggagaacagaaaggtgacacgagtggaagaggagctgccttatccaagt
catccagagagatttgactgctttgaacaagttttgtgcacggagagtctgtgtaaacgc
cattactgggaggctgaatggagtgtgaggggagctggattgtcagtgacctataaggga
atccaaagaacaggaagtgactgtaggtttgggctcaatgaaatgtcctggagtctcatc
tgctttgataacaaatactctgcctggcacagcaataatagaaccaacttaccggcccct
tctcccccctctaaaagagtaggagtgtatttggactggcccgccggcgagctgtccttc
tacagtgtgtctgacacacacacacttattcacttgcacacataccacagcacatttatc
gagcccctctatgctggatttaggctttatccagattcttcagtttcactgtattag
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