Carassius gibelio (silver crucian carp): 128014933
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Entry
128014933 CDS
T08819
Name
(RefSeq) POU domain, class 2, transcription factor 1-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128014933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
128014933
03021 Transcription machinery [BR:
cgib03021
]
128014933
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
128014933
Transcription machinery [BR:
cgib03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
128014933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
POU2F1_C
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
128014933
NCBI-ProteinID:
XP_052454651
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All DBs
Position
A1:16810240..16876541
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AA seq
608 aa
AA seq
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MENGGADQANGLDAHKSNGQGTSAISNVQAQALLQQLSLTPAQLLLPQTQAQLLAAAVQQ
SGSQQSSTTGANISASAATPITLSQPIQIASQLQPQGLNLQQFVLVQPGHSISPQIQPQF
IISPSPQGQTGLQQAQNLLTQLPQSQANLLPTQTSITLTTQAATPTRKIAAMPAPAVATP
KHMDAPCVEEASDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEA
LNLSFKNMCKLKPLLEKWLSDAENMSADCVVSSQNEMSPGLCESLNRRRKKRTSIETSIR
LALEKSFLEQSQKPSSEEITLIADQLNMEKEVVRVWFCNRRQKEKRINPPSSIGGSPGSA
IKTIYSSSTTAVSSSTNTLTVNSVVPLNNSISNLTLSGGVLGQVMSNSPSVISMAPAVTT
SAPAVTSHSISPSATTVKKEIAAQPVSIATTATQGAGQLLVTGTGLGGANLTAVTGLNPT
IITPSQLTQGGAFLSLAPALGNAFGPALMNNNALATIQALTSGGILPLNSINGNTGLLFA
NTSAGSSAPSLVTTPLFLNPSSLSLLPSNLLSAGGAGGGAFNLQLASDLQQSSVATTTKS
IALASKAQ
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacggaggagcagatcaggccaatggtctggacgcccataaatcaaatggacaa
ggaacaagtgcaatcagcaatgttcaggcacaagcactgctccaacagttgagtttaact
ccagcgcagttattgttgccgcaaacgcaggcgcagctcctcgccgcagccgtgcagcag
tctggaagtcaacagagcagcaccactggagccaatatttctgcctctgcagccacgccc
atcacactgtcccaaccaattcagattgcgtctcagctgcagcctcagggtttgaacctg
cagcagttcgtgttggttcagccaggccactccatcagtcctcagattcagccgcagttc
atcatatcaccttcacctcagggtcagaccggtctccagcaagctcaaaatcttctgact
caactacctcaaagtcaagctaacctcctcccaactcagaccagcatcaccctcaccaca
caggcggccacaccaacaagaaaaattgcagccatgcccgctccagcggtggccactcca
aagcacatggatgcaccgtgtgtagaggaggccagtgacctcgaggagcttgaacagttt
gcaaagactttcaaacagaggcgcatcaagctgggcttcactcagggtgacgtggggttg
gcgatggggaaactctatggaaatgacttcagccagaccacaatatccagatttgaggcc
ttgaacctgagcttcaagaacatgtgcaaactcaaacctctgctagagaaatggctcagc
gatgcagagaacatgtctgctgactgtgtggtgtcgagtcagaatgaaatgtctccgggt
ctctgtgagagtctgaaccggcggcgtaagaagcggacaagcatcgaaaccagcatccgt
cttgccttagagaagagcttcttggagcagagtcaaaagccatcatcagaggaaatcacg
ctgattgcggatcagctcaacatggagaaggaggtggtacgcgtttggttctgtaaccgc
agacagaaggagaaacggatcaatcctcccagtagcatcggcggatcgcctggatcagcc
attaaaactatctacagcagctccaccacagcagtgtccagcagcacaaacacactgact
gtcaattctgtggttcctctaaacaacagcatctcaaacctcacactcagtggtggagtt
ctgggtcaggtgatgtctaactcaccgtctgtcatctccatggctcctgctgtgaccact
tctgcccctgccgtgacatcacactcgatcagcccgtctgccactaccgtaaaaaaggaa
attgccgctcagccagtttccattgcaacaacagccacgcagggggcagggcagctgctg
gtgacaggtacaggactgggcggtgctaatctgactgctgtcacaggcttgaacccaaca
atcataacgccatcacaactgacacaaggtggggcgtttttgagtttggctcctgctctg
ggaaacgcttttggtcctgcgctgatgaacaacaatgcactggccaccatccaggctctg
acttcgggtggcattctgcctctgaactccattaatggaaacaccggcctgctattcgcc
aacaccagtgcaggaagctctgcccccagtctggtgaccacgcccctcttcctcaaccca
tccagcctctctctactaccatccaatctgctgtcagcaggcggggctggaggcggagct
ttcaacctgcagctggccagtgacttgcagcagagttctgttgccacgacaaccaagagc
attgccttggcctcgaaggctcagtga
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