Carassius gibelio (silver crucian carp): 128015219
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Entry
128015219 CDS
T08819
Name
(RefSeq) protocadherin-9-like
KO
K16498
protocadherin delta 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
128015219
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgib01009
]
128015219
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
128015219
Protein phosphatases and associated proteins [BR:
cgib01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128015219
Cell adhesion molecules [BR:
cgib04515
]
Cadherins
Protocadherins
128015219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
MAP17
Big_9
UTP20_C
Cadherin_4
Baculo_11_kDa
DUF6377
Motif
Other DBs
NCBI-GeneID:
128015219
NCBI-ProteinID:
XP_052454843
LinkDB
All DBs
Position
A6:complement(1590985..1594847)
Genome browser
AA seq
1031 aa
AA seq
DB search
MDLRDFFLLATLVACFWLDPTIAQELIYPIREELQENVLIGNIPKDLNISHMSSATTVTG
NLVYRLVSKAGDTPLLRVMSNTGEIFTTSNRIDREKLCPGPSFEDSECSFEIEVVILPND
YFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRYAIPSATDPDTGPNSVHKYEL
LNGQSTFGLDIVETPEGEKWPQLIVQQNLDRELKDTYVMKVKVEDGGNPQKSSTAILQVT
VTDVNDNRPVFKESQIEVHIPENSPIGTSVVHLIATDADVGANAEVKYMFGAQVSPATRR
LFALNSTTGLITVQRPLDREETAIHKLTVQASDGSSSPAKATITINVTDVNDNAPNIDLR
YIISPTNGTVMLSEKDPINTKIALITVSDKDTDVNGKVICFIEKDVPFHLKAVYDNQYLL
ETSALLDYEGTKEYIFKIVASDSGKPSLNQTALVRVRLEDENDNPPVFTQPVIELAVMEN
NQRDMFLTTISATDEDSGRNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFLFT
VTARDNGTRALQSQAAVIVTILDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADA
GENAMARLSILNDNENFILDQDSGVIKSNVSFDREQQSSYTFDVRAVDSGSPPCSSASKV
TINVIDVNDNPPIVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDGDTGMNAELKYTIVSGN
GRSLFRIDPVTGNITLEEKPMVADIGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTVGNS
SYIHDLIRRTMETPLDRNIGETSETYQNVDNLKTIIAIVTGTMVVIVVIFITVLVRCRNA
SQFKAAQRKKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEENKPDDSAHEPIN
GTISLPAELEEPGIGRFDWNATPTTTFKPSSPDLARHYKSASPQSAFHLKADTPVSVKKH
HVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKSKGAPLHTRQVKEHFYWS
ISTAYNCPAQY
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggatttaagggattttttcttgttggcaacattagttgcttgtttctggttagatccc
accatagcccaagagctcatttaccctatccgagaagagctacaggagaatgttcttatt
ggaaacataccaaaggacttaaacatctcccatatgagctctgcaaccacagttaccggt
aatctggtttaccgacttgtgtcaaaagcaggtgacaccccgcttcttagagtgatgagc
aatacaggagaaatctttaccacctccaaccgtatcgacagagagaaactctgtcccggc
ccctcttttgaagacagcgagtgttcctttgaaattgaggtggtcattttgcccaatgac
tatttcagattaatcaaaattaaaatcattgtcaaagacaccaatgacaatgcccccatg
ttcccctcacctgtgatcaacatttcaattccggaaaacacactcatcaacagccgctat
gctattccctctgccactgatccagataccggacccaacagcgtacacaaatacgagctg
ttgaacgggcagagcactttcggtttggatattgtggagacaccagagggtgagaaatgg
cctcagcttattgttcagcagaatttagatagagaactgaaagatacttatgtgatgaaa
gtcaaagtggaggatggggggaacccacagaaatccagcactgccattctacaggtgact
gtcactgatgttaacgataaccggcctgtcttcaaagaaagccaaattgaggtccacatc
ccagaaaattctcccatcggcacatctgtagttcatctaatagccactgatgcagacgtt
ggagccaatgcagaagtcaagtacatgtttggggcccaggtgtctccagctacaaggaga
ctttttgctctgaactccaccactggactcataacagttcaaaggccgcttgatcgagag
gagactgccattcataaacttacagtacaagccagcgatggaagctcgagtccagcaaaa
gccaccatcactatcaatgtgactgatgtgaatgacaatgctccaaacattgacctgaga
tacatcatcagtccaactaatggtactgtaatgctttctgaaaaagatccaattaacacc
aagattgccctcattactgtatctgacaaagacacagacgtcaacggcaaggtgatttgc
ttcattgaaaaagatgttccatttcacctcaaagcagtttatgataaccagtatttgcta
gaaacatctgcactgcttgattatgaaggaaccaaggagtacatcttcaagattgttgct
tctgactctggaaaacctagtctgaaccagaccgcactggtcagagtacggctggaggat
gagaatgacaatccacccgttttcacccagcctgtcattgagctggctgtcatggagaac
aaccaacgtgacatgttcctgacaaccatcagcgccacagatgaggacagtggacggaat
gcagagattgtctaccagcttggacccaacgcatcattttttgatcttgatcgtaaaacg
ggagtgctaaccgcatccagggtgtttgatagggaggaacaagagcggttcctctttacg
gtcaccgctagggacaatggcaccagggctctgcagagtcaagctgcagtcatagtgacc
atactggacgagaatgacaacagccctaaattcacacacaaccactttcagttctttgtg
tcagagaatctgcctaaatatagtacagttggagtaatcacagtcacagatgcagatgct
ggtgagaatgccatggcgagactctcaatccttaatgataacgagaactttatccttgac
caagattctggtgtcataaaatccaatgtatcctttgacagagagcagcaaagttcctac
acctttgacgtcagagctgtggacagtggaagtcctccatgctcgtcagcttccaaggtg
accatcaatgtcattgatgtcaacgataacccccccatcgtcatttacccaccatcaaac
acctctttcaaactagtgccactgtctgcgattccgggatcggttgtggccgaggtgttt
gcagtagatggagatacgggtatgaatgcagaactcaagtacactattgtgagtggtaat
ggaagaagtcttttcagaattgaccccgtaacgggaaacatcacattagaggagaaaccc
atggtggcagacataggcctccacaggctggtggtcaacatcagtgacctcggctatcca
aagtccctgcacactcttgtcctagttttcctgtatgtaaatgacacggttggaaattcc
tcatacatacatgatctcatccgtcggacaatggaaacgccactggataggaacattggc
gagactagtgagacttatcagaatgttgacaacctaaaaaccatcattgccatcgtgact
ggtactatggtagtgattgttgtcatcttcataacagttctagtgcgctgccgaaatgcc
tcacagttcaaggcggcccagagaaagaagcagggtgctgagtggatgtcccccaaccag
gagaacaagcaaaacaagaagaagaagcgcaaaaagaggaagtcgccaaagagctccctc
ttgaacttcgtcaccatcgaggagaataaacctgacgactctgcccacgaacccataaat
ggaaccataagtctcccggctgagctcgaggagcccgggattggacgttttgattggaat
gccacccctaccaccaccttcaaacccagcagcccagacttggcccggcactacaagtcc
gcttcaccccagtcggccttccacctcaaagctgacactccggtgtctgtgaaaaagcat
catgtgatacaggagctgccactggacaatacctttgttgggggctgtgacacgctttcc
aaacggtcctccaccagctctgatcacttcagtgcctcagaatgcagttcacaaggaggc
ttcaagtcaaagggggcacctttgcacaccagacaggtaaaagaacacttttactggtct
ataagtactgcttataactgtcctgctcagtactga
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