Carassius gibelio (silver crucian carp): 128015289
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Entry
128015289 CDS
T08819
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I-like
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04010
MAPK signaling pathway
cgib04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128015289
04020 Calcium signaling pathway
128015289
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
128015289
Ion channels [BR:
cgib04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
128015289
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DACND
TMEM208_SND2
Motif
Other DBs
NCBI-GeneID:
128015289
NCBI-ProteinID:
XP_052454961
LinkDB
All DBs
Position
A6:complement(4094756..4170129)
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AA seq
2119 aa
AA seq
DB search
MTSEEEGPAVVGAEPHMDMCASPGWDGLVEEEAEPVEQEEAGPAEQVADDVSSEFSALVV
PYPELAPIVFFCLKQTTCPRSWCIRMVSSPWFERVSMMVILLNCVTLGMYQPCENIDCSS
ERCQILQAFDAFIYIFFALEMVVKMVALGIFGRRSYLGDTWNRLDFFIVMAGVVEYSLDL
QNINLTAIRTVRVLRPLKAINRVPSMRILVSLLLDTLPMLGNVLLLCFFVFFIFGIIGVQ
LWAGLLRNRCYPPDNFTLSTGVALPAPYYSPNEDDERPFICSLPQDNGIMSCGDVPARRV
AGHQCCLDVDDLLHHQALGLVTEPFLNASAIVPGLCVNWNQYYTRCHTGHRNPHKGAINF
DNIGYAWIVIFQVITLEGWVEIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQ
FSETKQREHQLMEEQRAAHLSSSTLASLVEPSDCYEEIFQLVCHILRKVRRHTVAFFRTL
CCKLQEQTHEKTNINGGEKSLQQHGEEKREWIGWKDECRDACSSKLISHCTSDGAAPDAS
AANQETEEEAPNETERCKREEGASRGRSQELWMEMRVKLLSIVESKYFNRGIMVAILINT
ISMGIEHHEQPEELTNVLEICNIVFTSMFALEMILKLTALGFFSYLRNPYNIFDGIIVII
SVCEIVGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIF
IFSILGMHIFGCKFSLKTDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMAST
SPLVALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSYSDDDVESSTNGSQQHKNSL
TSSDPKLSSLTPNGHLDLTPLEEEKTRTEFSEEHHQSKAICLGRRSSSLRHSRSSHYHHW
GRPPPQPSWSRRCSWISAGRSARGLRAGGVIGGSLRVRGVHSHPAEHESLLPHPPFLSRH
HRRALSLELPELLQRPPLVRKKSVSAEHQDCNGKGPGPQGPLLGEIYPQLNARKNKNDLE
EDTEYSLCFRIQKMMEVYRPDWCEKREDWSIYLFSPQNKFRQLCQTIIAHKLFDYVVLAF
IFLNCITVALERPRIHQGSLERVFLTISNYVFTAIFVAEMTVKVVSKGLYLGDRAYLRSS
WNVLDGFLVFVSLIDIVVSMAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLIT
SLKPIGNIVLICCAFFIIFGILGVQLFKGKFYYCVGLDVKNITNKSDCLSANYRWVHHKY
NFDNLGQALMSLFVLASKDGWVNIMYHGLDAAGIDQQPVINNNPWMLLYFISFLLIVSFF
VLNMFVGVVVENFHKCRQHQEVEEARRREEKRLKRMEKRRRKAQRLPYYSSYGRIRLLIH
SFCTSHYLDLFITLIICINVVTMSLEHYNQPQSLETALKYCNYFFSSTFVVEAMLKLIAF
GFRRFFKDRWNQLDLAIVLLSVMGITLEEIEINASLPINPTIIRIMRVLRIARVLKLLKM
ATGMRALLDTVVQALPQVGNLGLLFVLLFFIYAALGVELFGELVCNVEYPCEGMSRHATF
ENFGMAFLTLFQVSTGDNWNGIMKDTLRECPPGDSYSCNSSLQIISPMYFVSFVLTAQFV
LINVVVAVLMKHLDDSNKEAQEDAEMDAEIEMELAQGGLCCLGRPERPTGTDVGKRPAGG
CGNRQEAMAAVHTHASTSQSGLTPSRNTQDTQNQRKLCSPAQENQWLESVSLLMKDSLDG
EMQMIDNLSGSVFHHYCSPAIRRDGRSRSGEIRLAEVEQTSLMSELMSDKSSSPALTDDI
SLDEQSDYQLLDRDCKVEQGSTDLSTDVVVCRSFHPPSKACSPERDRRDVRCETGHQLQS
PAHGGDGSGGDGQTSSPLFHLPAEFFHPTTAVIPQGSPAIGAAQSGSRHASPASWASLRS
PGANSRVMGSQTSHRNSLLATGSSVSSLETMLEEGVSTLPLICRTHIPPPELTQRPCTPQ
TLFNLQATRGHQRNRSRYSDCTYPNRIRQDPSDEDTGSVVRAGGPSQAGNPEQLSDNLSS
YSLTCLHPPDSLALPLAKRCNSTGSLVLGSLAVRNKDGRCLYGFDPWTEATTEESERDAS
PLGTKTCSQTVGSGCRKNR
NT seq
6360 nt
NT seq
+upstream
nt +downstream
nt
atgacatcagaggaggaggggcctgccgtggtgggggcggagccacacatggacatgtgt
gcctctcctggctgggatgggcttgttgaagaagaggcggagcctgtcgagcaggaggag
gcggggccagcggagcaggtggctgatgatgtcagcagtgagtttagcgctctggtcgtc
ccgtacccagaactggcacccatcgtcttcttctgcctcaaacagaccacgtgtcctcgc
agctggtgcatccgcatggtgtccagcccgtggttcgagcgagtgagtatgatggtgatc
ctgctgaactgtgtgacgctggggatgtaccagccctgcgagaacatcgactgctcctcc
gaacgctgccagatcctgcaggccttcgacgccttcatctacatcttcttcgcgctggag
atggtggtgaagatggtggcactggggatcttcggccggcgcagttatctgggagacact
tggaacagactggacttcttcatcgtgatggccggggtggtggagtattcactggacctg
cagaacatcaacctgacggccatccggacggtcagagtcctgcggccgctcaaagccatc
aacagagtccccagcatgaggatcctggtcagtctgctgctggacacactgcccatgttg
gggaacgtgctgctgctctgcttcttcgtcttcttcatcttcggcatcatcggtgtgcag
ctgtgggctggacttctgagaaaccgctgctatcctccggacaacttcaccctctcaaca
ggtgtggcacttcctgctccgtattactctcctaatgaggatgacgagaggcccttcatc
tgctctctgccgcaggataacggcatcatgtcgtgcggtgacgtgccggcgcggcgtgtg
gcgggacatcagtgctgtctggacgtggatgatctcctgcaccatcaagcactgggcctc
gtgaccgaaccttttctcaacgccagcgccatcgtccccgggctctgtgtcaactggaac
caatactacactcgctgccacaccggacacagaaacccacacaaaggagccatcaacttt
gacaacatcggatacgcctggattgttatatttcaggttattactctggagggctgggtg
gaaatcatgtattacgtcatggatgctcactcattctacaacttcatctactttattctg
ctgattatagtcggctcgttcttcatgataaacctgtgtttggtcgtcatagcgactcag
ttttcagagaccaaacagcgtgagcatcagctgatggaggagcagcgagctgcccatctg
tcctccagcacgctggcctcattggtcgaacccagcgactgctatgaggagatcttccag
ctcgtttgccacatcctccgcaaggtgcgcagacacaccgttgccttcttcaggacgctc
tgctgcaaactacaggagcagacacatgagaaaacaaacatcaatggaggagagaagagc
ctccaacaacatggtgaggaaaagagggagtggataggatggaaggatgaatgtagggat
gcatgcagctctaagctaatctctcactgcacttcagatggagctgcacctgatgcctca
gcagccaatcaggagacagaggaggaggcacccaatgagacagagagatgcaaaagggaa
gagggggcaagtcgggggcggagccaagagctgtggatggagatgagggtcaaactgttg
agcattgtggagagtaaatattttaacagaggaatcatggtggccatcctcatcaacacc
atcagcatgggcatagaacaccatgagcagccggaggagctcactaatgttctggagatc
tgtaacatcgtcttcaccagtatgtttgctctggagatgatcctcaagctcacagcatta
ggcttctttagttacctgcgcaatccatacaacatctttgatgggatcatcgtgatcatc
agcgtgtgtgagatcgtgggtcagtctgacggcggtctctcggtgctccgaaccttccgc
ttgctgcgggtcctgaagctggttcggttcatgcctgctctgcgcagacagctggtggtt
ctgatgaagaccatggacaatgtggccacattctgcatgctgctgatgctcttcatcttc
atcttcagtattctgggaatgcatatatttggctgtaagttcagtctgaagacagacacc
ggagacacggttccagacaggaagaactttgactctctgctgtgggcaatcgtcactgta
tttcagatcctgactcaggaggactggaacgtggtgctgtataacggcatggcctccacg
tctcctctggtggcgctgtacttcgtggctctgatgacgtttgggaactatgtgctgttt
aacctgctggtggccattctggtggagggatttcaggctgagggtgacgctaatcgctcg
tactctgatgatgatgtagaatcctccaccaatggaagtcaacagcacaaaaactcgctc
acgtcctccgatccaaagctgtcatctttaactcctaatgggcatctggatctgacgccg
ctggaggaggagaagaccaggaccgagttctcagaggaacaccaccagagcaaagccatc
tgcctgggcaggagatcctcgtctctgcgacacagccgcagttcccattaccaccactgg
gggcgtcctccccctcagccgtcctggagccggcggtgtagctggatcagtgcgggtcgc
tccgcccgtggcctgagggctggaggggtcatcggggggagcttacgggtccgtggtgtt
cactcacaccccgccgaacacgagtctctcctgccacacccgcccttcctgtcacgccac
caccgccgcgctctctcactcgagctgccagagctcctgcagcgccccccgctggtccgg
aagaagagcgtgtctgcagaacaccaggactgtaatgggaagggcccgggtcctcagggg
cccctgctgggagagatttatccacagctcaacgcacgcaaaaacaagaatgacctagaa
gaagacaccgaatatagcctgtgtttccgtatccagaagatgatggaggtttatcgtccg
gactggtgtgagaagagagaggattggtccatttacttattctctcctcagaacaagttt
cgtcagctgtgtcagacgatcatcgctcataaactctttgactatgtggttctggctttc
atcttcctcaactgcatcacagtggctctggagagacccagaatccatcagggcagtctg
gagcgagtcttcctcaccatctctaactacgttttcactgccatctttgtggccgagatg
accgtcaaggtggtctcgaagggtctgtatttgggcgatcgggcgtatctgcgcagcagc
tggaacgttctggatggatttctggtctttgtgtctctgattgacatcgtggtgtcgatg
gcgggcggagcgaagatcctgggcgtcctgagggtgctcagactgctgagaacattacgc
ccgctcagggtgatcagtcgagctccgggtctgaagctggtggtggagactctgatcacg
tcgctgaagcccatcggaaacatcgtcctcatctgctgcgctttcttcatcatcttcggc
atcctgggagttcagctcttcaaagggaagttctattactgtgtgggtttggatgtgaag
aacatcaccaataaatccgactgtctgtctgccaattaccgctgggttcatcacaagtac
aactttgacaacctggggcaggctctgatgtcactgtttgtgttggcgtctaaagatgga
tgggtaaatatcatgtaccacggactagacgctgccgggattgaccagcagcccgtcatc
aataacaacccctggatgctgctgtacttcatctccttcctgctgatcgtcagtttcttc
gtcttgaacatgtttgttggtgtggtggtggagaacttccacaagtgccgtcagcatcag
gaggtggaggaggcgcggcggagggaggagaagcggctgaagcgcatggagaagaggagg
cgcaaggcccagcggctgccgtattactcctcgtacggtcggattcggctgttgattcac
tcgttctgcaccagtcattacctggacctcttcatcaccctcatcatctgcatcaatgtg
gtcaccatgagcctggagcactacaaccaaccacagtcgttggagacggcgctgaaatac
tgcaactacttcttcagctccacgtttgtggtggaggccatgctgaagctcatcgcgttc
ggcttcagacgcttctttaaagacagatggaatcagctggatctggccatcgttctgctg
tctgtgatgggaatcactctggaggagattgaaataaacgcttcgctccccatcaatccc
acaatcatccgcatcatgagggtcctgcgcatcgcccgcgtcctgaagctgttgaagatg
gcgacaggaatgagagcgctgctcgatactgtggtgcaggcgttaccacaggtggggaat
ctgggtttgctcttcgttctgttgttcttcatctacgccgcgctcggagtcgagttgttt
ggagaactggtgtgtaatgttgaatacccgtgtgaaggcatgagccgtcacgccacgttt
gaaaacttcggcatggcgttcctcactcttttccaggtttctacaggagataactggaat
ggcatcatgaaggacacgctgcgcgagtgtccgccgggcgacagctactcgtgtaactcc
agtctgcagatcatctcgcccatgtacttcgtcagcttcgttctgacggctcagttcgtc
ctgattaacgtggtggtggccgtgctgatgaagcacctggacgactccaataaagaggcg
caggaggatgcagagatggacgcagagattgagatggagctggcgcagggcggcctgtgc
tgtttggggcgtccggagcgcccaaccgggaccgatgtgggcaagagaccggcaggaggc
tgcgggaacaggcaggaggcgatggctgcagttcacacacacgccagcaccagccagagc
ggactgacaccgtccagaaacacacaggacacgcagaaccagaggaaactctgctcaccg
gcacaggagaaccagtggctggagagcgtctctctgctgatgaaggactcgctggatgga
gaaatgcagatgattgataatctctccggatctgtgttccaccattactgctctccagct
atcagacgagacggcaggagccgatcaggagagatccggctggcagaggtcgagcaaacg
tctctgatgtcggagctgatgtcagataaatcctcctcaccagcgctgactgatgacatc
agcctggacgagcagagcgactaccagctgctggacagagactgtaaggtggagcagggc
agcactgacctcagcacagacgtggttgtgtgcagaagctttcatcctccgagcaaggcc
tgcagtcctgagcgagacagacgggatgtgcggtgtgagacgggtcatcagctccagtct
ccagctcacggcggagatggcagtggaggagacggtcagacgtcttcacctctctttcat
ctcccggctgagtttttccaccctaccaccgctgtgattccacagggcagcccagccatc
ggagcggcccagtcgggctccagacacgcctctccggcttcatgggcttctctcaggtcc
ccaggggccaatagcagggtcatgggctctcagacgtcccacaggaactccttgctggcc
actggcagttcggtgagcagcctggagaccatgctggaggagggcgtctctacactaccc
ctgatctgcagaacacacattcctcctccagaactcacccagagaccttgcacaccacag
actctgttcaacctccaggccaccagggggcaccagaggaatcggagcagatacagtgac
tgcacatatcctaacaggatccgacaagacccctccgatgaggacactggatccgtggtt
agggctggaggacccagtcaggctggtaatcctgagcagttatcggataatctgagtagc
tactctctgacctgtctgcacccgcctgattcgctggcactgcctctggccaagaggtgc
aacagcactgggagtttagtactggggagcctagcggtccggaataaagatgggaggtgc
ctttatggattcgatccctggactgaagcaacaactgaggaatctgagagggatgcatcc
cccttaggcaccaagacgtgcagccagactgtgggttctggctgccgtaagaacagatga
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integrated database retrieval system
