Carassius gibelio (silver crucian carp): 128015324
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Entry
128015324 CDS
T08819
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128015324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgib03021
]
128015324
03036 Chromosome and associated proteins [BR:
cgib03036
]
128015324
Transcription machinery [BR:
cgib03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128015324
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
128015324
Chromatin remodeling factors
BAF complex
128015324
PBAF complex
128015324
GBAF(ncBAF) complex
128015324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
128015324
NCBI-ProteinID:
XP_052455013
LinkDB
All DBs
Position
A6:complement(4623637..4648109)
Genome browser
AA seq
1614 aa
AA seq
DB search
MSTPEPSLGGTPCPGPSPGPGPSPGAVLGSGLSPGSSHSMMGPSPGPATSTGLSFPPQAS
VGYSQESLHQMHKPVEENLPEDARFSQMKVVPMRAGHSGMTRPGSPMDQHSQGYPSPLGS
SEHVSSPVSASGPPSGPLLSTSGSSSASLDGVDGQTLSQQNRPGSQSVAPGSSGSSAPTP
FNQSQLHQLRAQIMAYKMLARGQPLPEHLQMAVQGKRPMPGMPQGPSPAGGASAGFSRGH
GLVGPNMPPPGPSGVPAGVQGQNHNGPPKPWPEGPLVNAATPSNAPQKLMPPQPTGRPSP
APPSVPPAASPVMPPQTQSPGHLAHPSQPTTMVPLHQKQNRITPVQKPCGLDPVEILQER
EYRLEARITHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTAL
ETSLDSKGYKRNKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYH
RSITAKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRL
AYLLQQTDEYVANLTELVRAHKAVQALKEKKKKKRKKKKLENAEGQSGALGPDGEPLDET
SQMSDLPVKVIHVDSGKILTGVDAPKAGQLDTWLEMNPGYEVAPRSDSEDSGSEEDEEED
EEAPQLMQSQTPAEEKKKIPDPDSEDVSEVDARHIIEHAKQDVDDEYGSAVFARGLQSYY
AVAHAVTERVDKQSSLLINGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIAL
ITYLMENKRLNGPYLIIVPLSTLSNWVYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGK
FNVLITTYEYIIKDKHVLAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGT
PLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVL
RPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGT
KTLMNTIMQLRKICNHPYMFQQIEESFSEHLGFSGGIVQGPDLYRASGKFEVLDRILPKL
RASNHKVLLFCQMTSLMTIMEDYFAYRSFKYLRLDGTTKAEDRGMLLKTFNDPASQYFIF
LLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEE
KILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEGDEMLKKQDRNTGQ
EEDEVPDDETVNQMIARSEDEFDQFMRMDLDRRREEARNPKRKPRLMEEDELPTWIMKDD
AEVERLTCEEEEEKMFGRGSRQRKEVDYSDSLTEKQWLKAIEDGTLEEIEEEVRHKKTTR
KRRRDRDPDAIPSTSGARGGRERDDDSKRQKKRGRPPSEKLSPNPPSLTKKMKKIVDAVI
KYKENNGRQLSEVFIQLPSRKELPEYYELIRKPVDFRKIKERIRSHRYRSLSDLERDVML
LCQNAQTFNLEGSLIYEDSIVLQSVFTSLRQKIEREEESDGEESEEDEEDEGSDSETRSM
KVKIKLSRKDRSAERGRGRRRTARTRAKPVVSDDDTDEDQEEDRSNSVSEEEQG
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccggagccctcgttaggaggcacaccctgtccggggccctcgcctggtcca
ggtccgtctccaggggccgtgctggggtccggactgtcccctggatcctcacacagcatg
atgggccccagtcctggaccagccacttccacaggactctcctttcctccgcaagcgtct
gtgggatacagccaggagagtctgcaccagatgcacaagccagtggaggagaaccttcca
gaagacgctcgcttcagtcagatgaaggtggttccgatgagggccggtcacagtgggatg
acccgtccagggagcccgatggaccagcactcgcaaggatacccgtctccgctgggctct
tcagagcacgtgtccagtcctgtgtccgccagcgggcctccgtcaggtcctctcctgtcc
acctctggctccagctctgcctcgctggacggtgtggacggccagaccctctcgcagcag
aaccgtccgggaagccaaagtgtggccccgggctccagcggctcctccgctccgacaccc
ttcaaccagagccagctgcaccagctgcgagcgcagatcatggcctataagatgctggcg
cgcgggcagccgctcccagaacacctgcagatggcggtgcagggcaagcgtcccatgcca
gggatgccccagggtccgtctccagccggaggagcgagcgccggcttcagccgaggacat
gggttagtgggacccaacatgcctcctcctggaccttctggagtcccagctggtgttcag
ggccagaaccacaacgggcccccgaaaccatggcctgaaggtcctctggtcaatgcagcg
actccctcgaacgctcctcagaagctgatgccgccgcagcccactggacgtccctctccc
gcgccaccgtctgtgccgcccgctgcgtctccggtcatgccaccacagacccagtctcca
ggacacctggcccatccgtctcaacccaccaccatggtgccgctgcaccagaagcagaac
cgcatcacaccggttcagaagccctgcggtctggatccggtggagatcctgcaggagaga
gagtaccgactggaagctcgtatcactcaccgtattcaggagctggagaatcttccaggg
tctctggctggagatctgcgcaccaaagccacgattgagctcaaagcactccgactgctc
aacttccagagacagctgcgtcaggaggtggtggtttgcatgagacgcgacacggcctta
gaaacctccctggactcaaagggctacaagcgcaacaagagacagtccttacgtgaggcg
cgaatcacagagaaactagagaaacagcagaagatcgaacaggaacgcaaacgcaggcag
aaacaccaggaatatctcaacagcatcctgcagcacgccaaagacttcaaggagtaccat
cggtccatcaccgcaaagatacagaaactgaccaaagctgtggccacataccacgccaac
actgagcgcgagcagaagaaagagaacgagcgcatcgagaaagagcgaatgagacgcctg
atggctgaggatgaggagggttacaggaagctgattgaccagaagaaggacaagcgtctg
gcgtatctgctgcagcagacggatgagtacgtggctaatctgacggagctggtccgcgct
cataaagctgtgcaggccctgaaagagaagaagaagaagaagaggaagaagaagaagctg
gagaacgcagagggccagtcgggggccctgggacccgatggagagcctctggatgagacg
agtcagatgagtgatcttccagtgaaggtgatccacgtggacagtgggaagattctgact
ggagtggacgctcctaaagctggacagctggacacgtggctggagatgaaccctggttac
gaggtcgctccgcggtcagacagcgaggattctgggtcggaggaggatgaggaagaggat
gaggaagctcctcagctgatgcagtcacaaactcctgcagaagagaagaagaagattcct
gacccggacagtgaggacgtctctgaagtggacgcccgtcacattatagagcatgctaaa
caggatgtggatgatgagtacggcagcgcagtgtttgctcgtgggttacagtcttattac
gccgtggctcatgcggtcactgagcgggtggacaaacagtcgtctttgctaatcaacggt
caactcaagcaataccagatcaagggtctggagtggctggtgtctctctataacaacaat
ctgaacgggatcctggcggatgagatgggtttgggcaaaaccatccaaaccatcgcgctc
atcacgtacctgatggagaacaagcgtctgaacggaccctacctcatcatcgtgccgctc
tcgactctgtccaactgggtctatgagtttgataagtgggcgccgtctgtcgtcaaagtc
tcctacaagggatctcctgctgctagaagagccttcgtcccacagctgcgcagcggcaag
ttcaacgtgctgatcaccacgtacgaatacatcatcaaagacaagcatgtgctggccaag
attcgctggaagtacatgatcgtggacgaaggccatcgcatgaagaaccatcactgtaag
ctgacgcaggtgctgaacacacattacctggcgccgcggcgcgtgctgctgaccgggaca
ccgctgcagaacaagctgcccgagctctgggcgctgctcaacttcctgctgcccaccatc
ttcaagagctgcagcacgtttgagcagtggttcaacgcacccttcgccatgaccggagag
aaggtggatctgaatgaggaggagaccatcctgatcatccgtcgtctgcacaaggtgctc
cgccccttcctgttacgccggctgaagaaggaagtggaagcgcagctgcctgagaaggtg
gagtacgtgatcaagtgtgacatgtctgcgctgcagagggtcctgtacagacacatgcag
gccaaaggagtgctgctgaccgacggctccgagaaggacaagaagggtaaaggcggcact
aagactctgatgaacaccatcatgcagctgaggaagatctgtaatcatccgtacatgttc
cagcagatcgaggagtcgttttctgagcatctgggtttctcaggaggaatcgttcagggg
cctgatttataccgcgcctcggggaagtttgaggtgctggatcgtattttgcctaaatta
cgagcgtccaatcacaaagtactgctcttctgccaaatgacgtctctgatgaccataatg
gaggattatttcgcttaccgcagctttaaatacctgcgtctggacggcaccactaaagca
gaggatcgtgggatgttgctgaagaccttcaatgatccggcctctcagtactttatattc
ctgctgagcaccagagccggaggactgggcctgaacctgcagagcgcagacaccgtcatc
atatttgacagcgactggaaccctcatcaggacctccaggcgcaggatcgagcgcaccgc
atcggtcagcagaacgaggtgagggttctgcggctctgtaccgtcaacagcgtcgaggag
aagatcctggcggccgctaaatacaagctgaacgtggaccagaaggtgatccaggccggc
atgttcgaccagaagtcgtccagtcacgagcgccgagcgtttctgcaggccattctggag
cacgaggagcaggacgagggggacgaaatgctcaaaaagcaggacaggaacactggtcaa
gaagaggacgaggtgccggacgatgagaccgtgaatcagatgatcgccaggagtgaagac
gagtttgaccagttcatgcgaatggatctggatcgccgccgcgaggaagcacgcaatccg
aagcgaaagcctcgtctgatggaggaggacgagctgcccacgtggatcatgaaagacgac
gccgaggtggaaagactcacctgtgaggaagaggaggagaagatgttcggccgcggctcg
cgtcagaggaaggaggtggattacagcgattcactcacagagaaacagtggctgaaggcg
atcgaggacgggaccctggaggagatcgaggaggaggtgcggcataagaaaaccactcgg
aagaggaggcgtgatcgggatccggacgccatcccgtccacttcaggtgctcgtggggga
cgagagagagacgacgacagtaaaagacagaagaaacgaggtcgtcccccgtctgagaag
ctttcgcccaaccctccgtcgctcaccaagaagatgaagaagatcgtggacgctgtgatt
aaatataaggagaataacggccgtcagctaagtgaggtgttcatccagctgccgtcacgc
aaggaactgcccgagtactacgagctgatccgcaaacctgtggacttcaggaagatcaag
gagcgcatcaggagccatcgataccgcagcctcagcgacctggagagagacgtgatgctg
ctgtgccagaacgctcagaccttcaacctggagggatcactgatctatgaggactctatc
gtgctgcagtcagtgttcaccagcctgcgtcagaagatcgagagagaggaggagagtgac
ggagaggagagtgaggaagatgaagaggatgaaggctctgattcagagactcgatctatg
aaggtgaagattaaacttagccgtaaggacagaagtgcagagcgcggcagaggacgcagg
agaaccgcaagaacgcgagccaaacctgtagttagtgatgacgacacagacgaggatcag
gaggaggatcggtccaacagcgtcagtgaggaagagcagggatga
DBGET
integrated database retrieval system
