Carassius gibelio (silver crucian carp): 128015332
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Entry
128015332 CDS
T08819
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03010
Ribosome
cgib04120
Ubiquitin mediated proteolysis
cgib04137
Mitophagy - animal
cgib04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
128015332
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128015332
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128015332
04137 Mitophagy - animal
128015332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cgib03011
]
128015332
04121 Ubiquitin system [BR:
cgib04121
]
128015332
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgib04147
]
128015332
Ribosome [BR:
cgib03011
]
Ribosomal proteins
Eukaryotes
Small subunit
128015332
Archaea
128015332
Ubiquitin system [BR:
cgib04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
128015332
Exosome [BR:
cgib04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128015332
Exosomal proteins of colorectal cancer cells
128015332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Dsc3_N
TBK1_ULD
Ubiquitin_5
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
128015332
NCBI-ProteinID:
XP_052455033
LinkDB
All DBs
Position
A6:5124726..5126463
Genome browser
AA seq
156 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRE
CPADECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaaaaccctcacagggaaaaccatcaccctcgaggttgagccctct
gatacaattgaaaatgtcaaggctaagattcaagacaaagaaggaatccctcctgatcag
cagaggctgatctttgctggtaaacagctggaggacggacgcaccctctctgactacaac
attcagaaggagtccacacttcatctagtgctgagactgcgtggtggtgctaagaagagg
aagaagaagtcctacaccacccccaagaagaacaagcacaagagaaagaaggtcaagctc
gctgtgctcaaatattacaaggttgatgagaacggcaagatccaccggctgcgccgtgag
tgtcctgcagatgagtgtggagccggggtgttcatggccagccactttgaccgtcattac
tgtgggaagtgctgcctgacttactgcttcaacaaaccagaggacaagtga
DBGET
integrated database retrieval system
