Carassius gibelio (silver crucian carp): 128015351
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Entry
128015351 CDS
T08819
Name
(RefSeq) non-homologous end-joining factor 1-like
KO
K10980
non-homologous end-joining factor 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
128015351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgib03400
]
128015351
DNA repair and recombination proteins [BR:
cgib03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
128015351
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GFIT
Motif
Pfam:
XLF
XLF_CC
XRCC4
Gliadin
Motif
Other DBs
NCBI-GeneID:
128015351
NCBI-ProteinID:
XP_052455067
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All DBs
Position
A6:complement(5481801..5494829)
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AA seq
314 aa
AA seq
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MEADLFTLPWVPVNIGGSDLLAKAWFGDTKYRLLLSDLNTVWEEDMSADDIQSRAQDLNK
RLRAPTQAFFSHLCSVAKPCFSSRNDGQISAAHVVLEQCGDNLTVKLKSELAGLPFYWEF
RCTAAPVGVVCRQLVRPLLAVTRVLQLQGEDLAALLARKDAEIQDYQENGAVLTRARLQT
EPFEVHKYKENFFTKIVPQMGVTLDSLGFDSELQALYVAVSSGKTGPKRKRSPDSSPVAE
HDLVSEQYKHGSDVLTDVGSSLASQEKNDVKGSSGRPQVAHSKQTVLLPSTTAAGSEERS
TSRPKKKKVVGLFR
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagacctgtttactctcccatgggtgccagtgaatatcggtggttctgatctt
ctggctaaagcctggttcggtgacacaaagtaccggcttctgctgagtgacctgaacact
gtgtgggaagaagacatgagtgcagatgacatccagagtcgagcacaggatctgaataag
cgtctgagggctcctacacaggcttttttctctcatctttgttctgtggcaaagccttgt
ttctccagtcgaaatgatggtcagatctctgcagcacacgttgttcttgaacagtgtggt
gacaatctgacggtcaaactcaagagtgagctggctgggttgccgttctactgggagttt
cgctgcaccgcagcacctgttggcgtggtgtgcaggcagctggtgcgccccctgctggcg
gtgactagagtcctgcagctgcaaggggaggatctagcagcacttttggctcggaaggat
gcagagatacaggactatcaggagaacggagctgtgctaactagagccagactacagacg
gagccgtttgaggtgcacaaatacaaggagaacttcttcacaaagattgttccacagatg
ggtgtgacgctggacagtttgggctttgactcagagttgcaggcgctgtacgtggccgtg
agctcagggaaaacgggtccgaaacgtaaacgctctcctgacagcagccctgtggcagaa
cacgacctcgtctctgaacaatacaaacacggctctgatgtcctcacagatgtgggttct
tcactggcttctcaagaaaagaatgatgtcaaaggatcatcaggaagacctcaggtggca
cacagcaaacagactgtcctgttaccatcaactactgctgcaggttctgaggagcgttcc
acctcacggccaaagaagaagaaagtagtggggctttttcggtga
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