KEGG   Carassius gibelio (silver crucian carp): 128015693
Entry
128015693         CDS       T08819                                 
Name
(RefSeq) integrin alpha-6-like isoform X1
  KO
K06485  integrin alpha 6
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib04382  Cornified envelope formation
cgib04510  Focal adhesion
cgib04512  ECM-receptor interaction
cgib04514  Cell adhesion molecule (CAM) interaction
cgib04518  Integrin signaling
cgib04810  Regulation of actin cytoskeleton
cgib04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    128015693
   04514 Cell adhesion molecule (CAM) interaction
    128015693
   04518 Integrin signaling
    128015693
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    128015693
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    128015693
   04810 Regulation of actin cytoskeleton
    128015693
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    128015693
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cgib04147]
    128015693
   04515 Cell adhesion molecules [BR:cgib04515]
    128015693
   04090 CD molecules [BR:cgib04090]
    128015693
Exosome [BR:cgib04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   128015693
  Exosomal proteins of breast milk
   128015693
Cell adhesion molecules [BR:cgib04515]
 Integrins
  Integrin alpha subunits
   128015693
CD molecules [BR:cgib04090]
 Proteins
  128015693
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 FG-GAP_2 Integrin_alpha LYRIC NdhN
Other DBs
NCBI-GeneID: 128015693
NCBI-ProteinID: XP_052455701
LinkDB
Position
A1:21920834..21957940
AA seq 1080 aa
MGSYRTLTLSLLSLLGLTLISAFNLDTDYVIRKTGDANSLFGFSLAMHRQLRPADKRMLL
VGSPRARALPGQKSKITGGMYNCDINSPSQSCQRVMFDNEENLAAENKQNQWMGVTVQSQ
GPGGKILVCAHRYQRRMFVGTVQEVRDLTGRCYILSEDLTINSAADEDGGDWMFCNGRNR
GHERFGSCQQGLSATFTKDYHYLVFGAPGAYNWKGVVRMEQKNHSLWEENIFDDGPYEVG
DEDQLDPDLVPVPANSYLGFSLDSGKMLTKRGQLTIVAGAPRANHSGAVVLLKKNSSMLT
AEYILEGAGLASSFGYDLAVLDINGDGWQDIVVGAPQYFIKDGDIGGAIYVYLNEEGAWD
KITPKRIEGAAYSMFGLAVENMGDVNMDGYHDVAVGAPYDSNGAGNVYIFNGSPQGLKKA
QVLGGKDHDVKLFGYSLAGNMDLDRNDYPDLAIGSLSDSVFMYRARSVISIEKTVTTTPK
ELDLTQKNCGKDICLEVKACFRFSVKPKTYNPTLKLQYSIKVESERKKLNLPSRVIFTPR
SANEFESTGQVELKGQGTESCVSRVLRLQEPLRDKLRGIPIEVSVEILNSSTHRKRQAAL
PKLLPILDSNQEATTVTKVQFIKEGCGADNVCQSDLQLQYRFHTREPNRDVFNPLPEEKG
VPILSLSDQKDIVLEIKVLNKGEDAYEAQLTSSFPKSLSYSAVRTESGEKPVTCLANQNG
SQADCELGNPFKKDAKTTLYIILSTGGISLDTTEIEIDLKLKTTSDQVQLQAIKAKAIVK
IQLLLSLSGIAKPSQVYFTGEVKGESAMKLATDVGSPIDYEFRVTNLGKPLKSFGTPSMS
IQWPKHNSQGKWLLYLMKMTSTGLGSFICSNQDEVNKLNLKDNLVSRTKREIGETPAKVG
TVSLFTDKRKYSVLSCEDGAECVTFRCPLMGMDSNAVISLRAYLWNATFLEDYAKLNYID
IIVKASLDFKTSATNIQLKNEPAQVRVTVFPERRVAQYGGLPWWIILLAILLGLLLLGLL
VFLLWKCGFFKRSKYDESIPSYNAVRIKMEERGKKPGKEEMDPREKKQWMTSWNENESYS
NT seq 3243 nt   +upstreamnt  +downstreamnt
atgggatcttacaggacactgactttatcgctcctcagtttgctgggactgacgctgatc
tctgccttcaacttggacacagattatgtaatcaggaaaacgggagatgccaacagcttg
ttcggtttctcccttgccatgcaccgacaactcagaccagctgataaaagaatgttgctt
gttggttccccaagggctagagcattgccggggcagaagtcaaaaattacaggaggcatg
tacaactgtgacataaattctcccagtcagtcatgtcaacgagtgatgtttgacaatgaa
gaaaacctggcagctgaaaataagcaaaaccagtggatgggagttactgtacagagccag
ggaccaggaggaaagatactggtctgtgcgcatcgctaccagcgccgcatgtttgtgggc
acggttcaggaggtgcgtgacttgacaggtcgttgttacatactaagcgaggacctaacg
attaatagtgccgcagatgaagatggaggagactggatgttctgtaatgggagaaacaga
gggcacgagcgcttcggatcatgccagcagggtctatctgccacattcacaaaggactat
cactatctggtgtttggagcgccaggtgcttacaactggaaaggagtggtgaggatggag
cagaagaaccattctctgtgggaagagaatatctttgatgacggcccatatgaagttggg
gacgaggaccaacttgatccagacttggtgcctgtccctgctaacagttatttaggtttc
tctctagactctggaaaaatgctgactaagagaggtcagttgactattgttgctggggct
ccaagagccaatcacagcggagcagttgtgctattaaagaagaactcatccatgttgaca
gccgagtacatcctcgagggtgccgggcttgcctcttcctttggctatgatcttgcagtt
cttgacatcaatggagatgggtggcaggacatcgtagtcggagcacctcagtactttatt
aaggacggtgatatcggtggggccatctatgtttatctaaacgaggaaggggcttgggac
aagatcacccctaagagaattgagggagctgcttattccatgtttggtttggctgtggaa
aacatgggcgacgtgaacatggatggttatcatgatgttgcagttggtgccccatatgac
agtaacggagctggaaatgtatatatcttcaacggttcacctcaaggcctgaaaaaagcc
caggttcttgggggaaaggatcacgatgtgaaactctttggatactctcttgctgggaac
atggatttggacagaaatgattaccctgatctggcgatcggatctctctctgattcagtg
ttcatgtacagggcacggtcagttatcagcattgaaaagactgttaccaccactccaaag
gagctggacctcactcagaaaaactgtggaaaggatatatgccttgaggtgaaagcctgc
ttcagattttcagtcaaacccaaaacctacaatcctactctgaagttgcaatactctatc
aaggttgaatctgaaaggaagaaacttaatcttccttctagagtcatcttcaccccgcgc
tcagcaaatgagtttgaaagcacaggacaagtagagctcaagggtcagggcacagaaagc
tgtgtttccagagtcctcagactgcaggaacccctaagagacaaactgagaggtatcccg
attgaggtctctgtggagatcctgaactcatccacacacaggaagagacaggctgctctc
ccgaaactgcttcccatcctggactctaatcaagaggccaccactgttaccaaggttcag
ttcatcaaggaaggatgtggtgcggataatgtctgtcagagtgacctgcaactccagtat
agattccacaccagggaaccaaacagagacgtctttaatccattacctgaggaaaaagga
gttcccatcctgtctctgagtgatcagaaggacatcgtcttggagatcaaggtgctcaac
aagggtgaagatgcttatgaagcacagctgacttcctcgttccccaaatccctctcttat
tctgccgttcgcactgaatctggtgagaaaccagtcacctgtctagccaatcagaacggc
tcacaagccgattgtgaacttggaaatcctttcaaaaaagatgcaaagacaaccctttac
atcattctgagcacgggtggaatttctttggataccactgaaattgaaattgaccttaaa
cttaaaacgacaagtgatcaggtgcagttacaagcaatcaaagccaaagccattgttaag
atccagctgctgctctccctctcaggcattgctaagccatctcaggtctactttactgga
gaagttaaaggagagagcgcaatgaagttggcgactgatgtcggcagtccaattgactat
gaattcagggttacaaacttgggcaaacctcttaaatcattcggtacaccttcgatgagt
atccagtggcctaagcataactctcaaggcaagtggctgctgtacctcatgaagatgacc
tcaaccggtttaggcagctttatttgctccaatcaagatgaagtcaacaaactcaatttg
aaggataatttggtgtcacgaactaaacgtgaaattggggaaactcctgcaaaagtggga
acagtctctctttttaccgacaagaggaaatactcagttttgtcgtgtgaggatggggcg
gagtgtgtcacattcagatgtcctctaatgggaatggacagcaatgctgtcatcagtctg
agagcttacctttggaacgctaccttcctggaggactatgcaaaattgaactatattgac
attattgtcaaggcatcacttgatttcaagacctcagctacaaatatccagctgaaaaat
gaaccagcacaggtacgcgttacagtgtttccagaacgcagagttgcgcagtatggcggt
ttgccctggtggatcatactcttggccattttactaggactccttttgctgggccttttg
gtgttcttgctttggaagtgtggatttttcaaacgctccaagtatgatgaaagcatcccc
agttataatgctgtgcggataaagatggaagagagggggaaaaagccggggaaagaggaa
atggatcctcgggagaagaaacaatggatgacttcttggaatgagaatgagagctactca
tag

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