Carassius gibelio (silver crucian carp): 128015751
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Entry
128015751 CDS
T08819
Name
(RefSeq) SWI/SNF complex subunit SMARCC2-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128015751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgib03021
]
128015751
03036 Chromosome and associated proteins [BR:
cgib03036
]
128015751
Transcription machinery [BR:
cgib03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128015751
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
128015751
PBAF complex
128015751
GBAF(ncBAF) complex
128015751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
PaaA2
Motif
Other DBs
NCBI-GeneID:
128015751
NCBI-ProteinID:
XP_052455805
LinkDB
All DBs
Position
A6:23055331..23069577
Genome browser
AA seq
1034 aa
AA seq
DB search
MAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTRLPIKCFFDFKSGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPVIYLSSEIEPKLLGKLKDIIKRHQGSVTEDKLSSSHVVVP
IPASLEDEEWVRPVMKRDKQMLLHWGYWPDSYDTWISASEVEAAVEDPPTAEKPRKVHAK
WILDLDQFNEWMNEEDYEVGEGGPRRKRISAKTLTDEVSAPDEKRDKKPSSAKKRKRSPS
PSPTPPPQESKKKNTKKGPTTPYTKSKRGQREEEQEDLTKDLDEPSPVPAVEEATLPKTV
TKKDSDSTPVKGGTMTDLDEQEDESMETVGKEEEEGSPSVKGEPVKGSDLHEDNVTEQTH
HIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLT
STACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPSSLV
PLQPKASQTSSSQQMLSFPDKIKDKPADLQNFGLRTDVYSKKSGPTKTKNAASATREWTD
QETLLLLEGLEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSSSSLGPLAYQP
VPFSQAGNPVMSTVAFLASVVDPRVASAAAKSALEEFSRMKEEVPAALVEAHVRRVEDAA
RSSGRPDPLYGLEGSGIAGTGLEDSDKPSEDGSEENKNSDGQSSQDKRENKESKDGASEE
EEKQGENGKKEEERVREGETDRETEKTDSEMADGEKEKEQKEGLEEGQRDGESEGEKKAK
VERDVGEGNLATAAASALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEE
LETIMDREREALEYQRQQLLADRQSFHMEQLKYAEMRARQQHFQQIQHQHHSSQPANQSG
STPSVTHQPVTNASGPPPTQSPASVSATNALNEAPPPTSRSSPPTIAQTGAAHDSSTPLA
GDSLYPNAPVPPTQ
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggcggtacggaagaaagacggcggcccgaatgtaaaatatttcgaagcgtctgatacc
gtctcgcagttcgacaatgtccgggtttggctgggcaagaattataaaaagtatattcaa
gcagagccccccaccaataaatctttgtcaagtctggtggttcagctccttcagtttcag
gaggaagtgtttggccggcatgtcagcaaccctcccctcactagactaccgataaagtgt
ttttttgattttaaatctggaggagctctgtgtcatattctggctgctgcctacaagttc
aagagtgatcaaggatggaggagatttgacttccagaatccttcgagaatggaccgcaat
gttgaaatgttcatgactatagaaaagtccttggtacagaataactgcttgtcccgacct
gtgatttacctgagttcagagatagagcccaagctgctgggaaaactgaaggacatcatc
aaacgacaccagggatctgtgactgaagataaactgtccagctctcatgtagtggtgcct
attcctgctagtctggaggacgaggagtgggttcgtcctgtaatgaagagagacaaacag
atgctgctacactggggctactggcctgatagttatgacacatggatctcagccagtgag
gtggaggctgctgtggaggatccgcccactgctgagaaacccaggaaggtccatgccaag
tggattcttgacctggatcagtttaatgagtggatgaatgaggaagactatgaggtggga
gaaggaggaccacggaggaagagaatttcagcaaagactctcacagatgaagtgagcgct
ccagatgaaaagagggataaaaaacccagcagtgccaaaaaaaggaagcgctccccgtct
ccatctcctacccctccaccacaggagagcaagaagaaaaacaccaagaaagggcccact
actccctacactaagtccaaacgaggacagagagaggaagaacaggaagatctgactaaa
gatttagatgaaccctcacctgtgcctgcagtggaggaagcaacactacctaaaacagtg
actaagaaggactcagattctactccagtgaaaggaggcactatgactgacctggatgag
caagaggatgaatcaatggagactgtagggaaggaggaagaagaaggttctccgagtgtg
aaaggagaaccggtgaagggttcggaccttcatgaggataatgtcactgaacagacccat
cacatcattatacctagctatgctgcttggtttgactataacagtgtccatgctatagag
cgcagagcactgcctgagtttttcaatgggaaaaacaagtcaaagacacctgaaatttac
ctggcataccgtaacttcatgattgacacgtacagactgaacccacaggagtatttgacc
tctacagcatgccgaaggaacctggctggagatgtttgtgccattatgagggtccatgcc
tttctggaacagtggggcttgattaactatcaggtggattcagagagtcggcccactccc
atggggcctccacccacctcacactttcatgtgctggcagatactccatcaagtctggta
ccactacagcctaaagcatcccagacttcatcctctcagcagatgctctcattcccagac
aaaatcaaggacaaaccagctgacttgcagaactttgggttaaggacagatgtgtacagt
aagaaaagcggcccaactaaaactaaaaatgctgccagtgccactcgagaatggacagac
caggagacactgctactgctggagggtctagagatgtataaagatgactggaataaagta
tcggaacacgtgggcagccgcacacaggatgagtgcatcctccacttcctgcgtctaccg
atcgaagacccctacctggaggatagctcctcctccctaggcccgctggcctatcagcca
gttccgttcagtcaggcggggaatcctgtcatgagcacggtggcattcctggcctctgtg
gttgaccctcgagtggcttctgctgcggctaaatcagcacttgaggagttctctcgaatg
aaggaggaggtaccagctgcgctggtggaggctcatgtgcgtcgagtggaggacgcggcc
agatcaagcgggagaccagaccctctctacggcctggagggcagtggcatagcaggaacc
ggccttgaggattctgacaaaccctctgaagatggaagtgaggagaataaaaacagtgat
ggtcagtctagccaagataaaagagaaaataaggagagcaaagatggagccagtgaggag
gaagaaaaacaaggagagaacggcaagaaagaggaagagagagtgagagaaggggagacg
gacagagagacagagaaaacagactcagaaatggctgatggcgagaaggagaaagaacag
aaggaggggttggaagagggtcagagggatggagagagcgagggggagaagaaagcaaag
gtggagagagatgtaggagagggaaacctggccactgccgctgcttcagcactcgctgct
gctgccgtcaaagctaagcacttggcagcagtagaggaaaggaagatcaagtctctggtg
gctctgctggtggagacccagatgaagaaactggagatcaaactccgacactttgaagag
ttggaaaccatcatggacagagagagagaggcactagagtatcagaggcagcagcttctt
gctgatcgtcagtcgtttcatatggagcagttgaagtatgcagagatgagagcccgacag
caacacttccagcagatccaacaccagcaccatagcagccagcctgccaatcagtctggc
agtactccatctgtaacccaccagcctgtcactaacgcctctggcccgcccccaacacaa
agccccgcctctgtgagcgccactaatgccctcaatgaagctccaccacccacctctcgc
agttctcccccgaccatcgcacagactggagcagcgcatgattccagcactccactagca
ggggattctctgtatccaaatgcccctgtgcctccaacacagtaa
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