Carassius gibelio (silver crucian carp): 128015800
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Entry
128015800 CDS
T08819
Name
(RefSeq) serine/arginine-rich splicing factor 3a
KO
K12892
serine/arginine-rich splicing factor 3
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03040
Spliceosome
cgib05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128015800
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128015800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
128015800
Spliceosome [BR:
cgib03041
]
Common components
Common spliceosomal components
SR proteins
128015800
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Extensin_2
RRM_7
Motif
Other DBs
NCBI-GeneID:
128015800
NCBI-ProteinID:
XP_052455929
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All DBs
Position
A6:complement(23674668..23684189)
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AA seq
168 aa
AA seq
DB search
MGDPSLSRDCPLDCKVYVGNLGNSGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDP
RDATDAVRELDGRTLCGCRVRVELSSGEKRSRYRGPPPSWNRRPRDDYRRRSPPPRRRSP
RRRSFSRSRSRSLSRERKRERSLSRDRNYKPSRSFSRSRSRSRSNGRK
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgggagacccttccctaagccgggactgcccactggattgtaaagtatatgttggtaat
ttgggcaacagtggtaacaaaactgagttggagagagcatttggctattatggtcccttg
aggagcgtgtgggtggcaagaaatccccccggctttgcttttgtggagtttgaggacccc
agagatgcaactgatgctgtgagggagcttgacggaagaacactgtgtggttgtcgagtg
agagttgaactgtccagtggtgaaaaacggtcaaggtatcgaggaccacccccttcttgg
aatcgtcgccctcgtgatgattatagacgccgcagcccaccccctagacgccggtctcct
aggagacggagctttagtcgtagtcggagcaggtccctttccagagagaggaaaagagag
aggtctttgtcccgcgatagaaactataaaccttcaagatctttctcaagatcacgcagt
cgttcacgttccaatggtcggaagtga
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