KEGG   Carassius gibelio (silver crucian carp): 128015810
Entry
128015810         CDS       T08819                                 
Name
(RefSeq) WD repeat-containing protein 82-like
  KO
K14962  COMPASS component SWD2
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    128015810
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgib03019]
    128015810
   03036 Chromosome and associated proteins [BR:cgib03036]
    128015810
Messenger RNA biogenesis [BR:cgib03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     128015810
Chromosome and associated proteins [BR:cgib03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     128015810
    COMPASS/SET1 complex (yeast)
     128015810
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_WDR75_1st NBCH_WD40 WD40_RFWD3 Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st Beta-prop_NWD2_C WD_LRWD1 Beta-prop_HPS5 VPS8_N MinC_C PQQ_2 Beta-prop_VPS8
Other DBs
NCBI-GeneID: 128015810
NCBI-ProteinID: XP_052455950
LinkDB
Position
A6:23852273..23857480
AA seq 313 aa
MKLTDNVLRSFRVAKVFRENSDKINCFDFSSNGETVISSSDDDSIVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD
KGPFATFKLQYERTCEWTGLKFSNDGKLILVSTNGGTLRVLDAFKGAVLHSFGGYNNSKG
VILEASFTPDSQFAMIGSEDGKIHVWNAESGMKVAVLDGKHTGPVTCLQFNPKFMTFASA
CSNMAFWLPTIDD
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaagctcacagacaatgtgctgcggagcttcagggttgcgaaggttttccgagagaat
tcggacaaaatcaactgctttgacttcagctcgaacggcgaaactgtaatatcgagtagc
gatgacgactcgattgtcttgtacgactgccaggagggaaaacccaaacggacgctgtac
agtaagaagtatggtgtggatctcatcagatacacccatgccgccaacactgttgtctac
agctccaacaagattgatgacactattcgatacctgtccctacatgacaataagtacatt
cgctacttccctggacacagtaagagggttgttgctctgtctatgtctcctgttgacgac
acattcatttctggctcccttgataaaactattcgtctgtgggaccttcgctcacctaac
tgtcagggcctcatgcacctgcaagggaagcctgtgtgctcatttgatccggaggggttg
atttttgcggcgggagtgaattctgagatggtcaagctttacgatctacgctcctttgat
aagggtccattcgccacttttaaactacaatatgagcgaacctgtgagtggacgggtctc
aagttcagcaatgacggaaagctcattctggtctccaccaatggaggaacactccgagtg
ctggacgctttcaaaggagccgtgctccactcatttgggggttataacaacagtaaaggt
gtcattctggaggcctctttcacaccagactctcagttcgccatgatcggatcagaagat
ggaaagatccatgtgtggaatgctgagagtgggatgaaagtagcagttcttgatgggaag
cacactggtccagtcacctgtctacaatttaaccccaaattcatgacctttgccagtgcc
tgttctaacatggcattctggttacccacgattgatgactga

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