Carassius gibelio (silver crucian carp): 128015879
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Entry
128015879 CDS
T08819
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1-like isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgib01009
]
128015879
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
128015879
Protein phosphatases and associated proteins [BR:
cgib01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128015879
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
128015879
mRNA cycle factors
Stress granule specific factors
128015879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Staufen_C
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-GeneID:
128015879
NCBI-ProteinID:
XP_052456057
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All DBs
Position
A6:26020824..26031006
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AA seq
701 aa
AA seq
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MSQLQFQAPANPAPSAAPLQLAPPQPGFSIPCGAAPLPSESASHPLRNSALPSASATPFC
NPTESNMANPKEKTPMCLVNELARYNKIQPEYKLLSEQGPAHSKIFSVRLTLGDQHWDAE
GTSIKKAQHSAATCALTQTNLPKPNHRSPRHPGKNPGGIYKGSEYNVTHTVELNALCMKL
GKKPIYKPIDAYQGMRPAFNYNIRAPGPYARPMQHYYYPFPPVGPVLYHMELSIGGQQFH
GKGRTRQAAKHDAAAKAIKYLQKEPVMQQIAEMKEEPVQENLNKSEISQVFEIALKRNMS
VNFEVLKETGSPHLKSFVVRVTVGEFSGEGEGKSKKIAKKLAAIAVLEELHKLPQLPVID
KIPLRIKKKSKSIIKLQTSPEYGQGMNPISRLAQIQQAKKEKEPEYTIVTERGLPRRREF
VMQVSVAGQNAEGMGPSKKVAKRNAAEKMLEFLGFKVPQPQPPKPALKTDEKTPAKKPGD
GRKVTFFEPGSVEKAGLVNKEEDFRIPFLSHQQLPAGILPMVPEVAQAVGANQGPHAKDY
GRTAAPNPAKTTVTAIIANELLFAGTSPTAEGILKTNNSLAHRPHGPLTRPSEQLSYLAT
VQGLQVEYKDFPKNNKNELVSLINCSSQPPLISHGIGKDVESCHDMAALNILKLLSELDQ
QSNERTANGPMTGCNKQDLEGDALLKPANSSTIRKTLDGTV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagcttcagttccaggcacctgccaaccctgcacccagtgctgcccctctacag
ctggccccgccccaacctgggttcagcattccctgcggcgccgctcctttaccctcagag
agtgcgagtcacccgcttcgaaactccgccctgccttccgcctctgccacgcccttctgc
aaccccacagaatctaacatggcaaaccctaaagagaagacccctatgtgtctggtaaat
gagttagcccgttacaataagatccaacctgaatacaaactactcagtgaacaaggacca
gcccactccaagattttctcagtgcggttaactctgggggatcagcactgggatgcagag
gggaccagtatcaaaaaagcccagcactcagcagcaacatgtgctctcacccaaactaat
ctccccaaacctaatcacagaagcccccgccacccaggcaagaacccaggtgggatctac
aagggctcagagtataatgtaacccacactgtggagcttaatgcactttgtatgaagttg
ggcaagaagcccatctacaaacctatagatgcctaccaggggatgagaccagcattcaac
tacaacatcagagcaccaggcccttatgcacgccccatgcagcattattactacccattt
cctcctgtggggccagtactgtatcatatggagctgtctatcggtggacaacagttccac
ggcaagggccgcacacgtcaagcagccaaacatgacgctgcggctaaagctatcaaatat
ctgcagaaagagccagtaatgcagcaaatagctgagatgaaagaagagccagtacaggaa
aaccttaacaaatcagagatcagccaagtgtttgagattgcactgaagcgcaacatgtct
gtgaattttgaggtgcttaaagagactggctctcctcacttgaagagttttgtggtgcgg
gtaacagtgggcgagttttcaggggagggtgagggcaaaagcaagaagatcgccaaaaaa
ctagccgccatcgctgtcctggaggagctccacaaactgcctcaactacctgtcatcgac
aagataccactacgcattaaaaagaaaagcaagtccattattaagctgcagaccagtccc
gagtacggtcagggcatgaaccccatcagcagactggctcagatccagcaggctaagaaa
gaaaaagagccagagtacactatagtgacagagagaggactgcctcgacgcagagagttt
gtcatgcaggtgtcagttgcaggtcagaatgcggaaggaatgggacctagtaaaaaagtg
gccaagagaaatgcagccgagaagatgctggagtttctgggcttcaaagtgcctcagcca
cagccacccaaaccggctctgaaaaccgatgagaagactcctgctaagaagcctggagat
ggacgtaaagtgaccttctttgagccaggctctgtggagaaggctggtctggtcaataag
gaggaagatttccgaattccctttctcagccatcagcagcttcctgctggcattttaccc
atggtgcctgaggtggcacaggcagtgggtgccaaccagggaccccatgccaaagactac
ggtcgcacagctgcccccaacccagccaagaccactgtaactgccattattgccaatgag
ctgctgtttgctgggacgtccccgaccgcggagggtatactgaagaccaacaacagcttg
gcacacagaccccacggaccccttaccagaccgtccgaacagctcagctacctggccact
gtacagggcttacaggttgaatacaaagactttcccaaaaataacaagaacgagcttgtg
tctctgatcaactgctcctctcagccccctctcatcagccacggcatcggcaaggatgtg
gagtcctgccatgacatggctgctctgaacatcctgaagctcctgtcagaacttgaccag
cagtctaatgagcgcacagctaatggaccaatgacagggtgcaacaaacaagacctcgag
ggcgatgcattattaaaaccggctaactcaagcaccatcagaaagacactggatggcaca
gtgtaa
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