Carassius gibelio (silver crucian carp): 128015958
Help
Entry
128015958 CDS
T08819
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6-like isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgib03036
]
128015958
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128015958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
CHDCT2
DEAD
HDA2-3
HTH_Hrp3
Chromo_MIT1
MUN
Motif
Other DBs
NCBI-GeneID:
128015958
NCBI-ProteinID:
XP_052456190
LinkDB
All DBs
Position
A6:complement(28148351..28185967)
Genome browser
AA seq
2953 aa
AA seq
DB search
MSGAGVSRGRQKDQEKMKIQKKDKQMSATHGLKHTPSAAAANASDQNAQTTFPIGHLGKE
QLRIIGGPPNHCMTHPKHSGLREAGPAASSHSLRPLSINSEEDDGGGGTRVKKKRRKKDK
KEAEWQKDEESNAKPKRREQKEGKELLPRKTKVAKEQKDHKKREPKAQKEVKKVRKGQDV
KVKIQAKNTATHLPSKRGRKPKEQSAMPPEKKKKGKRKSDAVLEMVESDDTTSLSTLATG
GEESIDPIDNTKRRSGRQVKRRKYNEDLDFKVVDDDGETIAVLGPGRIAAMSSSTLAWQA
EEPPEDEANIIEKILSVRTVKKETSPDEPPEEMEEFYVKYRNFSYLHCKWATLEELEKDP
RISQKIKRFRNKQAQMKHIFTELDEDLFNPDYIEVDRVLEIAITTDTETGEEVTHYLVKW
CSLSYEESTWELQEDVDPVKIREFEELKEIPEIKHVERPLPEQWQKLEKTREYRNGNQLR
EYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLYEIYLMGLRGPFLIIAPLSTIT
NWEREFRTWTEMNAIVYHGSQISRQMILQYEMYHRDEQGNTVSGQFKFHGIITTFEMIMA
DCPELKKINWRCVVIDEAHRLKNRNCKLLEGLKLMNLEHKVLLTGTPLQNSVEELFSLLN
FLEPSQFPSESTFLEEFGDLKTEEQVKKLQAILKPMMLRRLKDDVEKNLAPKQETIIEVE
LTNIQKKYYRAILEKNFAFLAKGANQHNMPNLINTMMELRKCCNHPYLITGAEEKILESF
KKTYSSDAADFQLQAMIQAAGKLVLIDKLLPKLLAGGHKVLVFSQMVRCLDILEDYLIQR
RYTYERIDGRVRGNLRQAAIDRFSKVDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWN
PQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSLN
GVQQLSKLEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFA
KASFVSSGNRTDISLDDPNFWQKWAKIAELEIDSKAEKESLVIDTPRVRKQTRHYNSFED
DELMEFSELDSDSEERPCRTRRLSDRNRRYLRAECFRVEKNLLIFGWGRWKDILNHGRFK
WHLSERDMEVLCRALLVYCVRHYKGDDKIKSFIWDLITPTKDGHNQALQNHSGLSAPVPR
GRKGKKLKNQLSPPELKNADWLVHCNPEVVLQDDSYKKHLKQHCNKVLLRVRMLYYLKVE
VLGEAANQALEGIPASKLEVTLPDIDYIEIPTIWWDAEADKSLLIGVHKHGYERYNAMRA
DPALCFLERVGMPDVTALTVEQSGAETALDAPDSISKSDEIKEENDIKSEELEEKVEIKE
EPMSEETGKNDNTMTGGFIGSLAADLVAEVMEQGRIQWPAGSALTARLRRLITAYQRYTR
REPLRHDFLLHEGIAPVAWQIGEFRHCTTEPDPLFLEWQRRWTRREQADFYRTVSSFGVV
YDPEKKTFDWSQFRALARLERKTDESLERYFHSFVSMCRTACRLPPRKDEGNVDTSLFVE
PITEERAARTLYRIELLRKVREQVLRHLLLEARLLLCRPSLYLPVWWECGKHDRDLLIGV
AKHGLSRTDFYILNDPQLSFLEAHRNYVHKENHRYPVPGLPHHHCCLYDANLGHCQSPQP
PEYHPTPSHHTPTQLVNTHGHRQPTEVVASESGNSLEIGAGNREGFLDCPPLDDSLELGS
LQHEGLTSDTLHIKSGKEAFNGFPFNSATGGQNMLNSYGVQGELNGSQGDMADSIAGKLR
SDVLVGEQGSSEETGLMAPSMELDELQAPWESSDHAEASDMFNETDPILGAQTLEPSFLD
APQPEDGREGDETLTDCLSMPSSDSQSNPVEPLAPSFMLFKDLNVGETSVDQTDLSASLP
EYVSPPPPLGLPDVSLDQTDPISEEQEDRLSDSNITHGVPSPEEGAESLGFQDLSPDSPM
TMDTQDEIPSIASPRENCLEESQKGDYKVPFDDSNGDFKDPCEVALNELYKKPLTEPQKV
PLEESYDLTCDETLQEPCDGFQQDTTEQQLVEEPCKEPPELIGECNITNTNLPTDYPIPP
SLPSSPTTLPDTSESLSLEGVPKQELLMDPVVSDVKPEPDSTTQTPHLEQTEVLEVKEKI
NDEGAKAPALLGDVDGPRFALPMCEMVDSVHEIREPTIAQLLQEKALFSFSEWPKDRVII
NRIDSICHTILKGKWPSSSQQYESPTSLANTCVPSSAHQRAGFLSTRMPISQSLNFNLPH
AVPHLAKERLVAPAFLSELKRPRRSFEFEAEVLAKPSHLGEKIQVGLPHRANALLLNGWQ
DAAIDLSKPTELTVGGDSGPTGQMSHTVQSVPHKITGIGSIQGSLGLDMAGILQAGLIHP
VTGQIVNGGLRRDDSMLRRRRGRRRNIETPDLSFIKGRSVDLPEKQSGSESISHPVVSST
SSQSEGPTATPTTHSPHPPASSPAPPPASEATNVSLDRETANKGLIEWLRQNPNYNMELS
AFPSQNASMLHSFLERPKQRRHRCKDPTKLNVNSLTGEERVPVVHRNTGRRLGGAMAPAI
KELSRWLDANSEYYVAPDWADVVKHSGFLPEVKFTRILSEPVCRYPGPHRRGRRPRSEMP
KAPELPAGMGPLFMNGGLIGSMDLVSLPNLRNVPGISLTGIMGFPHGFATALPSGEDAKN
GLSMLPMMLHGMAAVQPSMYSAHMSGMMNQPLSTATSTATASSTTASVTLTNSATITSTS
NPADSLDSALQHDNASSPMSMENGNREDIKQGEEKKVSASVSTAAATSSSSSSITSTGSH
LTFNPFLIPGMSHSLLYPHMFLPPGSIMALPAMTVADSTGSPKRKRKKVREEGPEEGSSS
VGVHIDGVELKEFKDKQTPEQKSQEGEMEEGRPDVDLAQVKDPSEDRRTEEKDKNEMGEE
PEPSAQGSCDSEA
NT seq
8862 nt
NT seq
+upstream
nt +downstream
nt
atgtccggagccggtgtgtccagaggcagacagaaagatcaagaaaaaatgaaaatacaa
aagaaggacaagcagatgtctgccacccatggactaaagcacactccatcagctgctgcc
gcaaatgcctctgaccaaaacgcacaaactacatttcccatcggccacttgggcaaagaa
cagttacggatcatcggagggccgcccaatcactgcatgactcacccaaagcactctggg
ttacgggaggcagggcctgcggccagcagtcatagtctccgccctttatcaatcaacagt
gaggaggatgatggagggggcgggaccagggtgaagaagaaacgaaggaaaaaagacaaa
aaagaggcagagtggcaaaaagatgaagagagcaacgctaaaccaaagagaagggagcaa
aaggaagggaaggagcttcttccgagaaagacaaaggtggcgaaggaacaaaaggatcat
aagaagagggagccaaaagcccaaaaagaggtcaaaaaagttaggaaaggtcaagatgtg
aaagtgaaaatacaggccaagaacactgcaacacatctgccctccaaaagagggaggaag
ccaaaagagcagagtgccatgcctccggagaagaagaagaagggaaagaggaaaagtgat
gctgtacttgagatggtggaaagtgatgacacaacctctctcagcacgctcgccactggc
ggtgaggaaagcatcgaccctattgataacactaagaggcgatcagggcgtcaagtgaag
cgacggaagtataacgaagatcttgatttcaaggtcgtggatgatgacggggagaccatc
gccgtgttgggcccgggccgaattgctgccatgtcttcctccaccctcgcctggcaggct
gaggaaccccctgaagatgaggctaatatcattgagaaaatactctcagtgcgaacggtc
aagaaagagacatcccctgacgaaccaccagaagagatggaggagttttacgtcaagtac
agaaatttctcctatctgcactgtaaatgggcgaccttggaggaactggagaaggaccca
cgcattagccaaaaaatcaagcgtttcagaaacaagcaagcgcaaatgaagcacattttc
acagagctggatgaagacctgtttaatccagattatattgaagttgatcgggttttagag
atcgctatcaccacagatacagaaacaggagaggaagttacacactacctggtgaaatgg
tgctctttgtcatatgaggagagcacttgggagcttcaggaagatgttgaccctgtgaaa
atcagagagtttgaagaactgaaggaaattccagaaatcaagcatgtggaaaggcctctg
cctgaacagtggcaaaagctggagaagaccagagagtacaggaatgggaaccagctgcga
gaataccagttagaggggatgaactggctccttttcaactggtacaacaggaaaaactgt
attctggctgatgagatggggctggggaagaccatccagtccatcacgtttctctatgag
atttacctcatgggtctgagaggacccttcctcatcatcgccccgctctccaccatcacc
aactgggagagagagttccgcacatggactgaaatgaacgccatcgtctatcacggcagc
cagatcagtcggcagatgatcctgcagtacgagatgtaccaccgagatgaacagggaaac
actgtgtctggccagtttaagtttcatggcatcatcactacatttgaaatgataatggct
gactgcccagagctgaagaagatcaactggcgctgtgtggtgatcgacgaggcccatcgg
ctaaaaaaccgcaactgtaaacttctggagggactcaaactcatgaacctggaacataaa
gtccttctcacaggaacccctttgcagaactctgttgaggaactcttcagtctgcttaac
tttctggaaccctcacagttcccttctgagagcactttcctggaggagtttggagacctg
aagacagaagagcaggtaaagaaactgcaagccattctgaagcccatgatgctgaggaga
ctgaaggatgacgtggagaaaaatctggctcctaaacaggagacaatcattgaagtggag
ctcactaatattcagaagaaatactaccgcgccattctggagaaaaactttgcctttctt
gccaagggagcaaaccagcacaacatgcccaacctcatcaacacaatgatggagcttcgc
aagtgctgcaatcacccgtacctcattacaggtgctgaagaaaagatccttgagagcttt
aagaaaacctacagttctgatgctgcagattttcagctgcaggctatgatccaggctgct
ggtaaactagtgcttattgacaagttgctgcccaaactgctggccggaggacataaagtg
ctggtgttttcccagatggtccggtgcctggatatactggaggactacctcattcagagg
cggtatacatacgagcgtattgatgggagagttcgagggaatctacggcaggccgccatc
gatcgctttagtaaggtagactctgaccgcttcgtgttcctcctctgtacacgagcagga
ggtctgggcatcaacctcaccgccgctgacacctgtattatatttgactctgactggaac
ccgcagaacgacttgcaggctcaagctcgctgccaccggatcggtcaaagcaaagcagtg
aaagtatatcgccttattacacgaaactcatatgagagggagatgtttgacaaggccagt
ctgaaactgggattggacaaggctgttctgcaggacatcaaccgcaagggcagtctcaat
ggggttcagcagctctctaagttggaggtggaagatcttctcaggaagggagcgtacggt
gcacttatggatgaggaagatgagggctctaaattttgcgaagaggatattgatcagatc
ctgcagcgacgcacacagaccatcacaatccagtctgaggggaagggatcaacttttgcc
aaggctagctttgtgtcttcggggaaccgtacagacatctctctggatgatccaaacttc
tggcagaagtgggccaagattgctgaactggaaattgactctaaagcagaaaaggagagt
ctggtgatagacacccctcgcgtaaggaagcagacgcgtcactataactcatttgaggat
gatgaactgatggagttctctgaactggacagtgactctgaagaacgaccctgtcgcaca
agacgtctcagtgatcgcaacagacgctacctccgagcggagtgcttcagagtggagaaa
aaccttctcattttcgggtggggtcgctggaaggatattctcaatcatgggcgttttaaa
tggcacctgtcggagcgagacatggaggtgctgtgcagggcacttctggtgtactgtgtt
cgccattataagggagacgacaaaattaagagcttcatttgggatctgatcacacctact
aaagacggacacaatcaagcactacaaaaccactcaggtctgtctgctcctgtgcctcgg
ggtcgtaaaggcaagaagctgaagaaccagttgagtcccccagagctgaagaatgcagac
tggctggtccactgtaacccagaggttgtgcttcaggatgacagctacaagaaacacctc
aaacaacactgcaacaaggtgctactgagggtgcggatgctatactatctgaaggtggaa
gtgctgggggaggctgcgaatcaggctcttgaagggatcccagccagtaaactggaggta
accctgcctgatattgactacattgagatccctacaatatggtgggatgctgaagcggat
aaatcgctgcttattggagttcacaaacatgggtatgagcggtataatgccatgcgtgca
gaccctgctctgtgtttcctggagcgagtgggtatgcctgatgtcactgcattgacggta
gagcaaagtggagcagaaactgctttagatgcacctgatagtatcagcaagagtgatgaa
atcaaagaggagaacgatattaagtctgaggaattagaagagaaagtagagatcaaggag
gaacccatgtcagaggaaacagggaaaaatgataatacaatgacagggggttttatagga
tctctcgcagcagaccttgttgcagaagtgatggagcagggacggatacagtggccagca
ggctcggctcttacagcacgactccggcgcctcattactgcctatcagcgttatacacgc
cgtgagccgcttcgtcatgatttcctcttacacgagggaattgcacctgtggcttggcaa
ataggagagtttaggcactgcactactgaacctgatccgctctttttggagtggcaacga
aggtggacacgtcgagagcaggctgacttctatcgcaccgtgtcgtcgtttggagtagtg
tatgacccagagaagaagacctttgactggagtcagttccgtgcccttgctcgattagag
agaaagacggacgaaagcttggagagatatttccacagctttgtttcaatgtgtcgaacc
gcatgtagactgccgcccagaaaagatgaaggtaatgtggatacatcactgtttgtggag
cccattacagaagagcgagctgcccgaacattatatcgtatcgagcttttgagaaaggtc
cgtgagcaagtattgcgccacctgctcctggaggcacgactgctgctttgtcgccctagt
ctgtacttgcctgtctggtgggagtgtggcaaacatgaccgtgatcttctcattggggtt
gctaagcatggcttgagtcgaacagacttctacatcctcaatgacccccaattatccttc
ctggaggcccaccggaactatgttcataaagaaaaccacagatatcctgtcccgggcttg
ccccaccaccattgctgcttgtatgatgccaaccttgggcattgtcagtccccacaacct
ccagagtatcaccccacaccttcacaccacacaccaacacaactcgtcaatactcatggg
catcgccagcccacagaagtggtggcatcagagtctgggaattccctagaaataggtgca
ggaaacagggaaggatttttggattgccctccattggatgactctctagagttggggtct
ttacaacatgaaggcttgacatcagacacactacatatcaagtctggtaaagaggccttc
aatggattcccattcaattctgcaactggtggacagaatatgctaaattcatatggggtc
caaggggagctaaatgggtctcaaggagacatggcagactccatagctgggaaacttcgc
agcgatgttctggtgggagagcaagggtcttcggaggagactggcttaatggctccttct
atggaactagatgaacttcaagctccatgggaaagctcggaccatgctgaagcctctgac
atgttcaacgagactgatcccatcttgggagcgcaaactttggaacccagctttctcgat
gctcctcaaccagaagatggacgtgagggtgatgaaacgctcaccgactgtttgagcatg
ccaagttcggactcgcaaagcaaccctgttgaaccactggcaccgagcttcatgttgttc
aaagacctcaatgttggagagacttctgtggatcagacagatctatcagccagtcttcca
gaatatgtttcaccaccaccacctcttggactcccggatgtgagtcttgaccagacagat
cccattagtgaggagcaagaagataggcttagtgattctaacatcacacatggtgttccc
agtccagaagaaggagctgaaagcttagggtttcaagatctttccccagacagcccaatg
acaatggatactcaagatgagattccttcaatagcatctccaagagaaaattgtctcgag
gaatcccagaaaggggactacaaggtgccatttgacgattccaatggggattttaaagat
ccttgtgaagtggccttgaatgaactttacaaaaagcctctaacagagccacaaaaagtg
cctttagaggagtcttacgatttgacttgtgacgagaccctgcaggaaccttgtgatggg
tttcagcaagacacaacagaacagcagttggtggaagaaccctgcaaagaaccaccagag
ctaataggagagtgcaatataactaacactaatctcccaacagactaccctattccacct
tcactcccgtcatctcctactaccttacctgacacctctgaatccctgagccttgaagga
gtcccaaaacaagagctcctcatggatccagtggtgtcagatgtgaagcctgagccagat
agcactacacagacccctcaccttgagcagactgaggttttggaagtaaaggaaaagata
aatgatgaaggtgcaaaggcgccagcactactgggagatgttgatggaccacgctttgca
ttgcccatgtgtgagatggtagacagtgtccatgaaataagggaaccaaccattgctcag
cttctacaagagaaagctctcttctccttctcagagtggcctaaggacagagtgatcatc
aaccgtattgacagtatctgccacactatcttaaaggggaagtggccttcctctagtcag
cagtacgagtctcccacctcattggctaacacctgtgtgcccagcagtgcccaccagagg
gcagggtttctgtctaccagaatgcctatttctcagagccttaactttaacctcccacac
gcagtaccacacttagcaaaggagcggttagtggccccagcatttctttcagagctcaaa
cgtccaagacgtagttttgaatttgaggcagaagtccttgccaaaccaagccatcttgga
gaaaagatccaggttggcttgcctcatcgtgctaatgctctcctccttaatggctggcag
gatgccgctattgacctctccaaaccaacagagctaacagttggaggagacagtgggcca
actggtcagatgagccacactgtccagtcagtgcctcataaaataactgggataggctcc
atacaaggctcactgggattggatatggctggcattttgcaggctggcctgattcaccca
gtcacggggcagattgtcaacggcggtcttcgtcgtgatgattcaatgttgagacggagg
agaggacggagaagaaatattgagactcctgatctcagctttataaagggacgaagcgtg
gacttgcctgaaaagcagagcgggtcagagagtatcagccaccctgttgtgtcctccaca
tcctcccagtcagaaggccctacagccaccccgactacacattctcctcaccctccagca
tcctctccagctcctcctccagcctcggaggccacaaatgtgagcttggacagggaaaca
gccaataaaggcctaatcgaatggctaagacaaaaccccaactacaacatggagctttct
gcttttccgtctcagaatgcaagcatgttgcacagtttcttggagcgcccgaagcagaga
aggcatcgctgcaaagacccaaccaagctcaatgtcaactcactgactggggaggagaga
gtcccagtagtgcacagaaacacaggccgcaggcttggaggtgctatggctccagccatt
aaagagctctcccggtggctggatgcaaactctgaatactatgtggctcctgattgggca
gatgtggtgaagcactcgggttttctgccggaggtcaaattcacacgcatcctctctgaa
cctgtgtgtcgctatcccggtccacataggagaggcagacgaccccgcagcgagatgccc
aaagcccccgagctccctgctggcatgggtccgctcttcatgaacggtgggctcattggc
agcatggatctggttagcttacccaatctccgcaatgtccctggcatctcgctaactgga
atcatgggctttcctcacggttttgccactgctctaccatcaggagaagacgccaagaat
ggactcagcatgctgcccatgatgcttcacggcatggcggccgtgcagccgtccatgtac
agcgctcacatgagtggaatgatgaatcaaccactgtccactgcaacgtccactgcaact
gcatcctccactacagcgagcgtgactcttacaaactctgcaactataacctcaacctcc
aatccggcggatagtttggattctgcacttcagcatgataacgcaagctctccgatgagc
atggagaatgggaatagggaggacataaaacaaggggaagagaagaaagtttctgcttca
gtgtctacagctgcggccactagcagtagtagtagcagcatcacaagcaccggtagccat
ttgacctttaacccttttctgatcccaggaatgtcacatagtctgttgtatcctcacatg
ttcttgccaccgggcagtataatggcactgcccgccatgactgtagcagacagcacgggc
agccccaagaggaagaggaagaaggttagggaggaaggaccagaggagggaagcagcagt
gttggtgtgcatatagatggtgtggaactgaaggagtttaaagacaaacagacacccgaa
caaaagagccaagagggcgaaatggaagaaggcagacctgatgtagatttagctcaggtc
aaagatccttctgaggatagaagaactgaggaaaaagacaaaaatgagatgggagaggaa
cctgagccaagtgctcaaggctcgtgtgacagtgaagcctag
DBGET
integrated database retrieval system
