Carassius gibelio (silver crucian carp): 128016050
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Entry
128016050 CDS
T08819
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cgib04054
]
128016050
Pattern recognition receptors [BR:
cgib04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
128016050
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
TIR
TIR_2
LRR_1
LRR_9
LRR_NXF1-5
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
128016050
NCBI-ProteinID:
XP_052456329
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Position
A6:complement(30471420..30475331)
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AA seq
952 aa
AA seq
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MRQSSAFFFILNCCVLITLIDGFSLSNCTIYFPFEYTGHLKVLCNRMSYWKIPSPLPHNT
VNLDISNNAIHQIDERDFIGLSNLIILNISHNRISEIHSNALSDLTNLEELNLSNNKIKS
VTTNLFKGLANLSHLRLDSNYLETIENQSFATLSNLRFVNLTNNKLKHLSELHSVLQVPH
LQELYLGKNGFSVFNSSDIPSAFFGLKKLDLSRNPLTVFKMMENIFPDLEYLDLSSCFQK
KTPDWFILDKAFLNTVKTVNLSRNQIEVNQLDYIMQSFPSVTWMALDGLKGFKAEIFLQK
ACSPSLRGLHLEDNKLSVLNDHMFRPCALLNELHLRNNGVLRMYKSSFNHLVNLIELRIQ
KNSLKQLNNTLQVLPNLRILDLHLNSIQNLDCSDFTNLTQLRHLYLHRNRIVTIKACVFK
DLGNLEELILSSNRVLTVSGTFTHGPQNLQCLDLNNNKLGAIQNYNFKALNSLETLRLAD
NQILNIYPYAFAGLINLTDLHLASNKITETSLRNRDVFAGTPNIKSLDVSCNYISYESQE
ELQSPPFIHLSELRVLKINSQRQNLNHIPSNFLKGLTNLKDFYAGNLNIENLHVDTFSYT
PKLTYLDLSSNNLVNRDALTPKLFQPITGLNKITLGKTHLKSLDFLVDANLSNLTILRAS
MNELQLINQKIIQSLPKLKVLDLQNNSFTCDCSNAWFIDWAFKKNKTQVLYLNRYECRYP
LSLSGKSLAAFNAESCNVNYDFICFIYSSSIVFLTLVISFIYHFLKWQLVYAYYLFLAFL
NDKKRKQISNHLDFQYDAFISYNAQEEPWVLEELVPKLEDQHGLRLCLHHRDFQPGKAII
DNIVDAIYNSRKTVCLITHNYLKSVWCSQEIQVASFRLFDEQEDVLVLVFLEDIPMHQLS
PYYQMRKLVKKQTYLQRPKPGEDTQAFWQKLKIALETKENMEDTQILSGKDV
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgaggcaaagttctgcatttttcttcattttgaactgttgcgtcctcataaccctgatc
gacgggttttctttgagtaactgcacgatttatttccccttcgaatacactggccatctg
aaggtgctgtgcaacaggatgagctactggaagataccttctccattaccacacaatacc
gtcaatttggatatttccaataatgccatccatcagatcgatgaaagggatttcatcgga
ctttcaaatctgatcattttaaacatatctcacaacaggatatccgaaatacacagcaat
gcactgagtgacctaacaaacctggaagagctcaacctgtccaacaataaaatcaaaagt
gttaccacaaacctgttcaagggtcttgcaaacctgtctcatttaagacttgactcgaat
tacctagagacgattgaaaaccagtcatttgcaacactttcgaatttgagattcgtaaac
ctaaccaataacaagttaaagcacctttccgaactccattctgttcttcaagtaccacat
ttgcaagaactttacttgggaaagaacggcttcagtgttttcaactcaagcgacatcccg
tcagcattctttggtttgaaaaagttggatctgtcgaggaatcccttgacagtgttcaag
atgatggaaaacatctttcctgatcttgagtacttggacttgtcaagctgtttccagaaa
aaaactcccgattggtttattctagacaaggcgttcctgaacacagtcaagactgtcaac
ctcagtaggaatcagattgaagtgaaccaattggattatataatgcagagtttcccttct
gtgacctggatggcactggatggtctgaaggggttcaaggcggagatctttttacagaaa
gcatgttctcccagtctgaggggtctccacttggaggacaacaaactttctgtacttaac
gatcacatgtttagaccgtgtgcacttttgaatgagttgcacctaagaaacaacggagta
ctgagaatgtataagtcgtcattcaatcatctagtcaacttgatagaattacgaatacaa
aagaactccctgaagcaacttaacaacactcttcaggttctccccaacttacggatcctc
gaccttcatctcaacagcattcaaaatctagactgctctgattttaccaatctgacgcag
ttaagacatctgtatttgcacaggaaccgaattgtgacaatcaaggcatgtgtattcaag
gatttgggaaatctcgaagagctcattttgagcagcaatcgtgtgttaacggtcagtgga
acctttacacatggcccccaaaacttacaatgtttagatttgaataacaacaagttgggt
gcaatccaaaattacaattttaaagctttaaattcccttgagacattacgtcttgcagat
aaccaaattttaaatatctatccatatgcttttgcaggactcataaatttaacagacttg
catcttgcatctaataaaatcacggaaacatctctaagaaatcgtgatgtgttcgccggt
acgcctaacataaaaagtttagacgtgtcttgcaattacatctcatacgagagtcaagag
gagctacaaagtccaccgttcatccatttaagtgaactgagagttttgaagattaatagt
caacgtcaaaacttaaaccacatcccctcgaactttctgaaaggtctcacaaacttgaaa
gacttttatgctgggaatcttaacatagagaatttacatgtggacacttttagttacact
cccaagcttacttatttggatttgtcaagtaataatcttgtgaacagggatgccttgaca
cccaagcttttccagccaataacaggcctaaataagattacgctgggtaagactcacctt
aagtccttggacttcttagttgatgcaaatctctccaatctgacgatcctacgagcaagt
atgaatgaacttcaacttataaatcagaaaatcatccaatcgcttcctaaactgaaagtg
cttgacctgcaaaacaacagctttacatgcgactgtagtaatgcttggttcatcgactgg
gccttcaagaaaaataaaacgcaggtgctctacctgaacagatatgaatgtcgctatccc
ctttctttaagtggaaagagtctagccgctttcaacgctgaatcctgcaatgtgaattac
gacttcatctgctttatctacagctcttccattgtctttctcactctagtcatttcattt
atctaccactttctaaaatggcaactggtctatgcatactacctcttcttagccttcctc
aatgacaaaaagaggaagcaaatctcaaatcatctggatttccaatacgacgccttcatt
tcctacaatgctcaagaagagccatgggtcttggaagaacttgtgcccaaacttgaggat
caacacggattgagattgtgccttcatcaccgagacttccagccaggaaaggccattatt
gacaacattgtggacgcaatatacaacagccgcaaaaccgtctgcctgatcacgcacaac
tacctaaagagcgtttggtgttcgcaggagatccaggtggccagctttagactttttgat
gaacaggaagatgttttggttctagttttccttgaggatattcccatgcaccagctttcg
ccatattaccaaatgcggaagttggtgaagaaacagacgtatctacagcgccccaaacct
ggagaagatactcaagcattctggcagaaactcaaaatagccctcgagactaaagaaaac
atggaggacacacagattctttctggaaaagatgtttaa
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