Carassius gibelio (silver crucian carp): 128016067
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Entry
128016067 CDS
T08819
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic-like
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib00450
Selenocompound metabolism
cgib00970
Aminoacyl-tRNA biosynthesis
cgib01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
128016067
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
128016067
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cgib01007
]
128016067
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgib03016
]
128016067
Enzymes [BR:
cgib01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
128016067
Amino acid related enzymes [BR:
cgib01007
]
Aminoacyl-tRNA synthetase
Class I (U)
128016067
Transfer RNA biogenesis [BR:
cgib03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
128016067
Prokaryotic type
Other AARSs
128016067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
GST_N_5
Anticodon_3
WHEP-TRS
tRNA-synt_1
GST_C_2
GST_C_3
Anticodon_1
tRNA-synt_1e
GST_C
GST_N_3
Motif
Other DBs
NCBI-GeneID:
128016067
NCBI-ProteinID:
XP_052456388
LinkDB
All DBs
Position
A6:complement(30935037..30956402)
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AA seq
909 aa
AA seq
DB search
MKLYISDGNPQGVKVLASLELTGVKCEIEAVSHEEKVVPYLSDPRSPVLLLPDGQHLFSP
NSICQYLFDISGQKATDATNQWLEWEATTLQPAVLQSLHMVALQGKRGEAAAVMKEPLKW
LEQSLGKKNSPFLTAEAVSVADVVLWAALYPLLSDSSFDVGELPSVRGWFERVGDLPACQ
AAAKRVLKGKGVEALKTFLQKHPASQTQRRDSPTNATEAEVAEHVITAEEIEEAAQIWSE
GLKGSPAVTERKHPVLPQEGKRNVLLTSALPYVNNVPHLGNIIGCVLSADVFARYGRLRG
WNLLYVCGTDEYGTATENKAREEGLTPQEICDKYHAVHADIYQWFQIDFDFFGRTTTERQ
TEIAQDIFWRLHERGFLLEDTVEQLRCESCQRFLADRFVEGECPHCRYPEARGDQCDKCG
RLINAVDLRNPQCKVCKETPVIRSSKHLFLNLPKLEGELEQWLDKSTGSGDWTANARQIT
RSWIRDGLKPRCITRDLQWGTPVPHQDFKEKVFYVWFDAPIGYLSITANYTDQWEKWWKN
PQQVELYNFMAKDNVPFHSVVFPCSLLGAQDNYTLVNHLIATEYLNYEDTKFSKSRGVGV
FGDMAKDTGIPSDVWRFYLLYLRPEGQDSAFSWSDMALKNNSELLNNLGNFINRAGMFVC
KFFDGRVPEMLLNEDDKRLIAQVRWELKQYIQLLDKVRIRDALKCILNISRHGNQYIQLN
EPWKKIKGDHADRQRAGTVTGVSVNVACLLSAVLEPYMPAVSQTIRQQLQAPPPSVSSML
QNTGSFICTLPAGHHIGTVSPLFQKLENEQIEALRKRFGGQQAPSSAAESKPSAGAVHAS
VRVNADPERAKQLTALVAEQGNKVRGLKAQKADKSVIDDEVDKLLQLKKQLSLAEGKNPE
PAAQKGKKK
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtatatctccgacgggaacccgcagggggttaaagtgctggcgtcgctggag
ctcaccggagtgaagtgtgagatagaagcagtcagccacgaggagaaagtggtcccttac
ctcagtgaccccaggtcaccagtcctgctgttacccgacggtcagcatctcttcagccct
aacagcatctgccaatacctgtttgatatcagcggccagaaggcgactgacgcgactaac
cagtggctggaatgggaagctacgactttacagcctgcagtgctgcagtctctccacatg
gtggcgctgcagggtaagcgaggcgaggcggccgctgtgatgaaggagccgctgaaatgg
ctagaacagagtctgggcaagaaaaactcaccattccttactgcagaggccgtgtcagtt
gcagatgtcgtcctgtgggcggcgctgtatcctctcctgtctgactccagttttgacgtt
ggtgagctgccgtctgtgcgcggctggttcgagcgtgttggcgatctccccgcatgtcag
gcggccgctaaaagagtcctgaagggaaaaggtgttgaagccctgaagacgttcctccag
aaacacccagcttcacaaacacagcgccgggacagtcccaccaacgccactgaggctgaa
gtcgctgagcatgtgatcacagcggaggagattgaagaagctgctcagatctggtctgaa
ggactcaaaggttctcctgcggtcacagagaggaaacacccagttctccctcaggaagga
aagagaaatgttcttctcaccagcgctctgccgtacgtcaacaacgtgccgcacctggga
aacatcatcggctgtgtgctcagcgccgacgtgttcgccagatacggccgtttgcgcggc
tggaatctgctgtacgtctgcggtacggatgagtacgggacggcgacggagaacaaggct
cgtgaggagggtctgacgccgcaggagatctgtgacaaatatcacgccgtccacgcagac
atctaccagtggttccagatcgacttcgatttcttcggtcgcaccaccactgaacgacag
accgagatcgctcaggacatcttctggcgtctgcatgagcgaggttttctcctggaggac
acggtcgagcagctgcgatgtgaaagctgtcagcgcttcctggccgaccgcttcgtggag
ggcgagtgtcctcactgccgttacccagaagcccgcggggaccagtgtgacaaatgtggc
cgtctgatcaacgctgtggacctcaggaatccgcagtgtaaggtgtgtaaggagacgccg
gtgatccgctcgtctaaacacctgttcctgaacctgccgaagctggagggcgagctggag
cagtggcttgataagtcgacaggctccggtgactggacggcaaacgctcgtcagatcaca
cgctcgtggatccgtgacggtctgaaaccgcgctgcatcacgcgtgaccttcagtggggg
acacctgtgccacaccaggacttcaaggagaaggtgttctatgtgtggttcgacgctcct
attggctacctctccatcactgcaaactacaccgaccaatgggagaagtggtggaagaat
cctcagcaggtggagctctataacttcatggcgaaggacaacgttcccttccacagtgta
gtgttcccttgttcacttctcggagctcaagacaactacacactagtcaatcacctcatt
gctacggaatacttgaattacgaggacaccaagttctcgaagagccgcggcgtgggtgtg
ttcggggacatggctaaagacacggggatcccgtcagacgtctggcgcttctatcttctg
tatctgcgtcccgagggacaggactcggccttctcctggagcgacatggccctcaaaaac
aactcggagctcctcaacaacctcgggaacttcatcaacagagccgggatgttcgtgtgt
aagttcttcgacggtcgtgttcctgagatgctcctgaatgaagatgacaagcggctcatc
gctcaggtccgctgggagctcaagcagtacatccagctgctggataaagtcaggatccgt
gacgctctgaagtgcatcctcaacatctctcgtcacgggaatcagtacatccagctgaac
gagccctggaagaagatcaaaggagaccacgctgacaggcagcgagccgggacggtgacc
ggtgtgtcggtgaacgtggcgtgtctcctgtccgccgtgctggagccgtacatgccagct
gtcagtcaaaccatccgccagcagctgcaggctccgccccccagcgtcagctccatgctg
cagaacacagggagcttcatctgcacgctccccgccggacaccacatcggcaccgtcagt
cctttgttccaaaagctggagaacgaacagatcgaggctctgaggaaaaggtttggagga
caacaggctccgagcagcgctgcagagtccaaacccagcgctggtgcggtgcatgcatcg
gtgcgtgtgaacgcagatccagagagagccaaacagctgacggctttagtggcagaacaa
ggcaataaagtacgaggcctaaaagctcagaaagccgacaaatctgtaattgacgatgaa
gtcgataaattactgcaactgaaaaaacaactttctcttgcggagggcaagaacccggag
ccagccgctcagaaaggaaagaagaaataa
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