Carassius gibelio (silver crucian carp): 128016072
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Entry
128016072 CDS
T08819
Name
(RefSeq) zinc finger protein GLI1-like isoform X1
KO
K16797
zinc finger protein GLI1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
128016072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
128016072
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
128016072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
128016072
NCBI-ProteinID:
XP_052456396
LinkDB
All DBs
Position
A6:complement(31027756..31069375)
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AA seq
1396 aa
AA seq
DB search
MPVDMQPHQGLYHYNNTANQPSRGLAPSVRSVYSEVSDSREMYNPSMTPGACMDPYMRPP
HAPPPHGMMGHRGMPPPEGVSGAPYCNQSMMTSHHNLAHNQPGSEHMASGDASCFSTPRS
MLKLSKKRALSISPLSDASVDLQTVIRTSPNSLVAFVSSRCGPNAASSYGHLSVGTMSPS
LGFSGSMNYPSRPQGNMYGSHPVPSHHPRLHAPHKHTHLKTEPVLGSVMDNITIKSLEEH
SEGDVASPSSTGTQDPLLGLLEGRDDLDKEEKPEPEAIYETNCHWESCSKEFDTQEQLVH
HINNEHIHGEKKEFVCHWTDCSREQRPFKAQYMLVVHMRRHTGEKPHKCTFEGCNKAYSR
LENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYT
DPSSLRKHVKTVHGPEAHITKKHRGDTGPRPPGLTSAGHSSELLIEKEERSREDCKLLAP
ETTLKSQPSPGGQSSCSSERSPLGSANNNDSGVEMNLNAAGSLEDLTTQEENTGNTGGPE
SSGMCMSVQALKRLENLKIDKLKQIRRSTPPGRSAGNKLPALSGEKMGMCAPSPLLSNRR
VMELSATDLGGVSGMGMPCPPNDRRGSGTSSLSSAYTVSRRSSMVSPYLSSRRSSDISQV
GHCQSVMGADVPGDPLSPQNSQRGGSCQNPGGLPGLPSLTPAQQYSLKAKYAAATGGPPP
TPLPNMDQPGNPGRFLRECHGQPLPPFLQQGGTRRHSANAEYGTGVIYPHQAPGNNTRRA
SDPVRSGADPQGLPKVQRFNSLSNVSLMSRRNALQQCGSDASLSRHMYSPRPPSITENVM
MEAMAMDPHGTAEGREQGNMIQGGDRTYIGYQQPHLHPHNASQMSPGQEGLSCMDQVFQS
QMQGPYQGQRDEICAAGMMVQGDISNSLLQQAEYGMSNCQLSPSGPHYPSHADGSGPWGQ
TNHLHSPQTNTQYQGVGMQGQHYPHQGVYDPTSDPGHQRVTVKPEQFHSSIGGSSSCQNI
KPLHRHNVNMQTYPTQPQGRGLMSRSSNVNCDFLQGQMGTQTGLPQQSQVGSFPSGGGIN
LALAESRGSQTPMHQMKEMMVRNYVQSQQALLWEQQQEQRVVIDGLSGKPDGMDLGGQTA
MLQHSPQHQQANQNLYPGNSFQGYPNQNLMSPPQNTVPASIKENTTGFQGSCYGPDMVPR
PPQGRKPLSRQNSLSQQTSGAYLGSPTHLSPVHSTASPRRGVRLPPVQQQQHLEKFTNNN
NPMYYSGQIHMHHDIEKIQDGPCLAQQHLTGIDPNTKPTSMAYSDPAPMSNALENLDLEN
AQIDFASIIDDQEPSSYSPAIPPLGHHQCSSQTSSRLTTPQTSITLPSGLSNMAIGDMTS
MLTSLAGENKYLNTLS
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgccagtggatatgcagccacatcaggggctgtaccactataacaacaccgccaaccag
ccgagccgaggactggctccgtctgtgagatcggtctacagcgaggtgtctgacagcaga
gagatgtacaacccctccatgacccctggagcctgtatggacccctacatgcggccgcca
cacgcccccccgccgcacggcatgatgggacaccgcgggatgcctcctccagagggtgtc
agtggcgccccctactgtaaccagagcatgatgacatcacatcacaacctcgctcataac
cagccgggatctgaacacatggcatcaggagacgcgtcttgtttctcgacgcctcgctcc
atgctgaagctgagtaagaagcgcgctctgtccatctctccgctgtctgacgccagtgtg
gacctgcagacggtcatccgcacctcgcccaactctctggtggccttcgtgagctcgcgc
tgcgggccgaacgctgccagctcatacgggcatctgtctgtgggcaccatgagtccgtcg
ttgggtttctccggctccatgaattacccgtccagaccgcagggtaacatgtacggctct
caccccgtcccatcacaccaccccagacttcacgctccgcacaaacacacacacctgaag
accgagccggttctgggcagcgtgatggacaacatcaccatcaagagtctggaggagcat
tcggagggagacgtggccagtccgtcctccactgggacacaggatcctcttctgggttta
ctggagggcagagatgatctggataaggaggagaaacctgaaccagaagccatctacgag
acaaactgccactgggagagctgcagcaaagagttcgacactcaggagcaactcgtgcat
cacatcaataacgagcacatccacggagagaagaaggagttcgtgtgtcactggacggac
tgttctcgagagcagcggccctttaaagcccagtacatgctggtggtgcacatgcgcaga
cacacgggagagaaacctcacaagtgcactttcgaaggctgtaataaagcgtactcgcgt
ctggagaacctgaagactcatctgcgctcgcacaccggcgagaaaccctatgtgtgtgaa
cacgagggctgcaacaaggctttctccaatgcatccgaccgcgcaaagcatcagaaccga
acacactccaatgagaaaccgtacgtttgtaagatcccgggctgtacgaagcgctacacc
gacccgagttctctgaggaagcacgtgaagacggtgcacggccccgaggctcacatcact
aaaaagcaccgcggagacaccggaccacgtcctccgggtctgaccagtgcaggacatagc
tctgaacttctgatagaaaaagaggagagaagcagagaggactgcaaattactcgctcca
gaaaccacactgaaatcccagccaagtcctggcggccagtcatcttgtagtagcgaacgt
tctccactagggagcgctaacaataatgacagcggagtggagatgaacctcaatgcggcg
gggagtctggaggacctgaccacacaagaggagaacaccgggaacaccggcgggcccgag
tcgagcggaatgtgcatgtccgttcaggccctgaagaggttggagaacctgaagatcgac
aaactgaagcaaattcgccggtcaacaccacctgggcggagcgcagggaataaactgccg
gctctctcaggagagaagatgggcatgtgtgcaccttcacccttgctctccaaccggcgt
gtaatggagctttctgccacggatctgggtggagttagtggaatgggaatgccctgccca
ccgaatgaccgacggggaagcggcaccagcagcctcagctctgcctacacagtgagccgc
cgttcatccatggtctcgccctacctatccagcagacgctcaagtgacatttcccaagta
ggtcattgccagtctgtgatgggagccgatgttcccggcgacccactgtctcctcagaac
agccaaagaggtggatcatgccagaaccccggagggttgccaggtcttccgagtctgact
cctgcgcagcagtatagtctgaaagctaaatatgcagcagcaacaggcggcccaccgcca
accccgttacctaacatggaccaacctggcaaccctggaaggttcctgagggaatgccat
ggccaacctcttcctccatttctgcagcaaggtggcacacggaggcacagtgctaatgcc
gaatacggcacaggagtgatttatccacatcaggcacctgggaacaacacaaggcgtgcc
agcgatccagtacgctcaggtgctgacccgcagggtttaccaaaggtgcaacgctttaac
agcttgagcaacgtgtcccttatgagtcgccgcaatgcactgcagcagtgcggatctgat
gcctctctcagccggcacatgtactcacctcgtccaccgagcatcactgaaaatgttatg
atggaggccatggctatggatcctcatgggaccgccgaaggcagagagcagggcaacatg
atccaaggtggagaccgaacctacattggctaccagcaacctcacctccaccctcacaat
gcaagtcaaatgtctcccggacaagaaggtttgagctgcatggatcaagtcttccagtct
caaatgcaaggtccataccagggccagcgtgacgagatctgtgccgcggggatgatggtt
cagggtgacatttcgaacagtcttctacagcaggccgagtatggcatgagcaactgccag
ctcagtccttccggaccacattatcccagtcatgctgacggatcaggaccctggggacag
accaaccatctccacagccctcagaccaatacgcagtaccagggtgtagggatgcaagga
cagcactaccctcaccagggtgtatacgaccctacatctgaccccggccatcaaagagtt
actgtaaaaccagagcagttccattcatccataggaggatccagttcttgccagaacatc
aaacctctacatcggcataatgtgaatatgcagacgtatccaacgcagccacaaggccga
ggtctcatgagcagatcctccaatgtgaattgtgacttccttcaaggccagatgggaaca
caaaccggtcttccgcagcagagccaggtgggatcgttcccaagcggtggagggataaat
cttgcactggcggagagccgtgggtcgcagacgccaatgcatcagatgaaggaaatgatg
gtgaggaactatgtgcagtcccagcaagcgctcctgtgggaacagcagcaggagcaaagg
gtagtcatcgatggtctctctgggaagcctgatggcatggacctgggaggacaaacggcg
atgttgcagcacagtccacagcatcaacaagctaaccagaacctttatcctggtaattct
ttccaaggctaccccaatcagaacttgatgagcccaccgcaaaatacagttcccgcttcc
atcaaggagaataccactgggtttcagggatcctgctacggcccggatatggtgccacga
ccacctcagggacgaaagcctctgagtcgccaaaacagcttatcccagcagacaagtgga
gcttacctgggcagcccgactcacctgagccccgtccactccaccgccagtcccagaaga
ggagtccgtctcccgccagttcagcagcagcaacatttggaaaaattcaccaataacaac
aaccccatgtactactcaggccagatacacatgcaccatgatatagagaaaattcaagat
ggtccatgcctggcccagcagcacctgacagggatagaccctaataccaagcccacatcg
atggcctactcggaccctgcacccatgtccaacgccttagaaaacctggacttggagaac
gctcagattgactttgcttccatcattgatgaccaagaaccttcatcttacagtccagca
atcccacctctgggtcaccaccagtgctcctctcagacctcctcccgtctcaccacaccc
caaacctccatcacccttccaagtggcctttccaatatggcaatcggggacatgacctca
atgttgacatcccttgctggggagaacaagtatttgaacacattgtcttaa
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