Carassius gibelio (silver crucian carp): 128016217
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Entry
128016217 CDS
T08819
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
128016217
Enzymes [BR:
cgib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128016217
Spliceosome [BR:
cgib03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
128016217
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
128016217
NCBI-ProteinID:
XP_052456668
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All DBs
Position
A6:10877473..10895509
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AA seq
668 aa
AA seq
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MRGSSSYGDRDRDRGRDRGPRFGSSRVAPPPPKKFGNPGDRLRKKKWDLDQLPKFEKNFY
SEHPEVHHMSQYDVEEFCRKKEITVRGSGCPKPVTSFHQAQFPQYVMDVLLQQNFKEPTA
IQAQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTREL
AQQVQQVAYDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEVGKTNL
RRCTYLVLDEADRMLDMGFEPQIRKILDQIRPDRQTLMWSATWPKEVRQLAEDFLHDYVQ
INIGALELSANHNILQIVDVCMENEKDMKLIQLMEEIMAEKENKTIIFVETKKRCDELTG
RMRRDGWPAMCIHGDKSQPERDWVLSEFRSGKAPILIATDVASRGLDVEDVKFVINYDYP
NSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLEEARQAINPKLLQLVDTGR
GGGGGGRMRYRGNNSTSNNPNMMYQDECDRRMRSVTGSNKGSRSNNLSRDGRSGGSSRDD
RMSSSYRDRSRDGRNNYNSGPTYNSGGGDQFQSCGGGGGGQYGSRGGGTHPSGGGSGSAS
GGAGGQDQAGPPQGLFGAPPPPTQPGPGPQPLMAQQFPPPPQPIMGFMGPGQYPFASPPP
PLPPPPRK
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgagaggcagttcatcatatggagaccgagacagagatcgaggacgggacagggggcct
cgctttggatccagtcgagttgccccacctccacccaagaagtttgggaatccaggagat
cggctgaggaagaagaaatgggaccttgatcagctacccaagtttgagaagaacttctac
agtgaacacccagaggttcatcacatgagtcagtatgatgtggaagaattttgccggaag
aaagagattaccgtcagaggctctggctgtccaaagcctgtcaccagcttccatcaagct
caattccctcaatatgtgatggacgtgctgctgcagcagaactttaaggagcccactgct
atccaggctcaaggttttcctttggctctcagtggcagggacatggtgggcattgctcag
accggctccggaaaaacactggcttatctgctgcctgccatagtgcatattaaccatcaa
ccctacctggagagaggggatgggcccatttgtcttgtgttggcaccgacacgtgaatta
gcccagcaggtgcagcaagtggcttatgactatggcaagtcatctcggatcaagagtacc
tgtgtgtatggtggagcccctaagggtccacagatcagagatttagaaagaggtgttgaa
atctgcattgccacacctggccgtctgatcgatttcctggaggtaggaaaaaccaacctg
cgccgttgcacctacctagtgctggatgaggctgatcgtatgttggacatgggatttgaa
ccccaaatccgcaaaattcttgaccaaattagacctgacagacagactctcatgtggagt
gctacctggcctaaagaagttcgtcagctggctgaagatttcctccatgactatgtccag
atcaatataggagctctagaactgagtgcaaaccacaacatcctgcagatagtggatgtc
tgcatggagaatgaaaaagacatgaagctgattcagcttatggaggaaatcatggctgaa
aaggagaacaaaaccatcatctttgtcgagacaaagaaacgttgtgatgaacttactggg
aggatgcgaagagatgggtggcctgcaatgtgtattcatggtgacaagagccaaccagag
agggactgggtattatcagagttccgcagtggaaaagctccaattctgattgctactgac
gttgcctcacggggtctggatgtggaggatgttaaatttgtcatcaactatgactatcca
aactcttctgaggattacgttcatcgcattgggcgcacagcccgcagcaccaacaaaggt
acagcctataccttcttcacacctgggaaccttcggcaggctcgtgatctggtccgggtt
cttgaggaggctagacaggccatcaaccccaaactactgcagctggtggacacaggccgt
gggggagggggaggtggaaggatgcgttatcgtggcaacaactcaacctcaaataacccc
aacatgatgtaccaggatgaatgcgatcgccgcatgcgctctgtaaccggaagtaacaag
ggcagccgcagcaacaacttgagccgtgatggaaggtcaggtgggagcagccgtgacgac
cgtatgtcctcctcttatagagaccgcagcagggatggacgaaacaattacaactcagga
cccacctacaacagtggaggaggtgaccaattccagagctgtgggggcggaggagggggg
cagtatggctcccgagggggaggcacacatccgagtgggggtggtagtggtagtgctagt
gggggtgcaggagggcaagatcaggctggacctccccaaggtctgtttggagcacctcca
ccaccaactcagcctgggccaggtccacagccactcatggcgcagcagttccctcctcca
ccgcagcctatcatggggttcatgggtcctgggcaatacccatttgcctcaccaccacca
ccccttcctccccctcctagaaagtaa
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