Carassius gibelio (silver crucian carp): 128016545
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Entry
128016545 CDS
T08819
Name
(RefSeq) neogenin-like isoform X1
KO
K06766
neogenin
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04350
TGF-beta signaling pathway
cgib04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
128016545
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128016545
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
128016545
Cell adhesion molecules [BR:
cgib04515
]
Immunoglobulin superfamily
DCC/UNC5 family
128016545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
V-set
NDNF
Fn3_VIN3
Tissue_fac
GH101_dom-5
C1-set
fn3_2
V-set_CD47
SusE
TMEM154
Arylsulfotran_N
EphA2_TM
DUF4834
LapA_dom
Motif
Other DBs
NCBI-GeneID:
128016545
NCBI-ProteinID:
XP_052457089
LinkDB
All DBs
Position
A7:complement(7595070..7745180)
Genome browser
AA seq
1450 aa
AA seq
DB search
MAERGARLLLSLFCITITISHAEKGSAVRNFSPFQFSTEPSDTLAVRGAPALLNCSVHSE
FPAKIEWKKDGSFLSLASDDRRQVLADGSLLITSVVHSKHNKPDEGVYQCVATIDNLGTI
ISRTARLSVTGIPRYLSQPEAASVRMGDSHVLNCEVNPDLVSFIRWEQNKEPLKLDQRVF
TLPSGALVISNATEADAGLYRCVIDNAGPTKTSEEAEIQILPESGEERTLEFLLEPQHVS
KVVGESVLLPCVVTGHPTAYVTWTHKDQIIEYSKGRFEVLGGGSLRILSLTEKDAGLYSC
MADSANGSIEAQTELSMKASPQFLKKPANIYAHEATDVTFECEVTGSPAPTIKWVKNGDA
VIPSDYFKIIKEQNLLVLGLVKSDEGFYQCLAENDAGNVQSSAQLIILDQDVAIPFPPPT
SLTCATTDRLMPGSRGGAGPTPSAPRDVVASLVSTRFIKLTWRLPAEPHGDEVTYSVFYS
LEGNNRERIVNTSRPGEMQVTIQNLMPDTKYSFRVVAHNKNGPGESSAPLRVATQPEVQV
PGPAPNLQAVVMSPTTVSLSWDMPLTGNGEIQNYKIYYMEKGMDSEQDLEVNTLSYSMTG
LKKFTEYSFRVVAYNKHGPGVSTEDISVRTYSDVPSAPPQNMTFEVLNSKSIMVRWQPPP
ADAQNGEIIGYKIRYRKGTRKNEAAEITSGSQLYQLIDGLQRGTEYMLRVSAINVNGTGP
ATDWATAETFESDLDETTVPDVPSSLHVRPLVNSIVVSWTPPENQDIVVRGYSIGYGIGS
PHAKTIKLDYKQRYYTIENLNPSSHYVITLKAFNNVGEGIPVYESAVTRPQSDPIDPDVD
LYELFHAPYTPVPDPLPILPPVGVQASVLNYDTIKVTWADNSLPKNQKITDARYYTVRWK
TNIPANTKFKVANTTTLTHTVTGLKPNTLYEFSVMVTKGRRTSTWSMTAHGTTFEAIPSS
GPKDVTVVSKEGRPRTIIINWQPPSEANGKITGYIIYYSTDVNAEVHDWVIEPVVGNRLT
HQIQELTLDTTYYFKIQARNSKGMGPMSDAVQFRTPKAESSDKMANDQAPGILVKQGRPS
APEQGFGSVGKTDMSGTGDNHILVIIIIVSVGAFTIILVVVGAFLCTRRTTTQQKKKRAA
CKSTNGSHKYKANSKDLKPPDLWIHHERLELKPIDKSPESNPVMTDTPIPRTSQDITPVD
GSMDPMLQRRNSYRGHESEDSMSTLAGRRGMRPKMMMPFDAQPPQPVISAHPIHSLDNHH
HHYHLGSLASPTHSYLHHQSSTRSIATPISHLDRAESTESVRNTPSADLLPPSGQLSCTT
DLSETDISYHSSAAEEEPVFTTPTAHVRPTHPLKSFAVPAIPAHPMYDSAALPSTPLLSQ
TGPHSVKTASVGTLGRTRTPMPVIVPSAPDVSESSRLYEDTGSNYETDELTEEMAHLEGL
MKDLNAITTA
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggggagcccggctgctcctctctcttttctgcatcacgatcacaatttca
catgctgaaaaaggatcagcagtgaggaacttcagcccattccagttctccacggagccg
tcagatacgctggcagtgcgaggagcgccggcgctactcaactgctcagtccacagtgag
tttcctgccaagatcgaatggaagaaagatggctctttcctcagcctggcctcagacgat
cgcaggcaggtcctggccgatgggtctctgctcatcacctcagtggtccactctaaacac
aataaacctgatgagggggtttaccagtgcgtggccactattgacaacctgggcaccatc
ataagccgaacagctagactcagtgtcacaggtataccacggtacctgagtcagccggaa
gccgcatcagtgcggatgggtgacagtcatgtgctaaactgtgaggtgaatccagacctg
gtgtctttcatccgctgggaacaaaacaaagagccattgaagctggaccagagagtcttc
acactgcccagtggtgctctcgtcatcagtaacgccaccgaggcagacgcaggcctgtac
cgctgcgtgatcgacaacgctgggcccaccaagaccagtgaagaagcagaaatacagata
ctgcctgaatcaggggaagaaaggaccctggagtttctcctggagcctcagcatgtgtct
aaagtcgttggagagagcgttctgctcccctgtgtggtgacgggacatcccacagcctac
gtcacatggacgcacaaagaccagatcattgagtacagcaagggccgttttgaagtgctt
ggcggaggcagtctgcggatcttaagtctcacggagaaagatgccggtttgtacagctgc
atggcagacagtgccaatggatccatagaggcccagactgagctctcaatgaaagcttcc
ccgcagtttctgaagaaaccagctaacatatatgctcatgaagccacagacgtcacattc
gagtgtgaggtcaccggctcacccgctcccaccatcaaatgggtgaagaacggagatgct
gtcattcccagcgactatttcaagatcattaaggagcagaacttgctggtgctggggctg
gtcaaatcagatgaaggtttctatcagtgtttagctgagaatgacgctggcaatgtgcag
tccagtgctcagctcatcatattggatcaagatgtagccatccccttcccccctcccacc
tcactgacctgtgccactactgaccgtctaatgccaggctccagaggcggcgctggcccc
acaccctccgccccccgtgacgttgtggcatccctggtctccacccgcttcatcaagctg
acttggcgccttcctgctgaaccgcatggagatgaagtcacctactcagtcttctacagc
ctggagggcaataacagggagaggatagtgaacaccagtcgtccaggagaaatgcaagtc
accattcaaaacctcatgccagacaccaagtactccttccgtgtggtggcccacaacaaa
aacggccctggagagagctcagcgcccctgagggtcgccacccagcctgaagtccaggta
cctggccctgctccgaacctacaggcagtggtcatgtcccccaccacagtgagtctcagc
tgggacatgcccctcacaggcaatggcgagatccaaaactacaaaatctattacatggag
aagggcatggacagcgagcaggatctggaggtgaacacactgtcctacagcatgactgga
ctgaagaagttcacagagtacagtttcagagtggtggcctataacaagcatggacctgga
gtgtccactgaggacatatctgtgcgcacatactctgatgtccccagtgctccgccacag
aacatgacgtttgaagtgctcaactctaagagcatcatggtcagatggcagcctccgcca
gcagatgcccagaacggtgagatcatcggctacaagatccgctacaggaagggtacgagg
aagaacgaggcggcggagattacatcaggatcgcagctctatcagcttatagatggtctg
cagcgaggcactgaatatatgttgcgagtgtctgctattaatgtcaacggcacaggtccg
gccacagactgggccactgctgagacgtttgagagcgatctggatgagacaactgtgcca
gatgtcccaagctccttgcacgtgcggccacttgtgaacagtattgtagtgagctggacg
cccccggagaaccaggacattgtggtgaggggttactccatcggctatgggatcggcagc
cctcatgccaagaccattaaattggactacaaacagagatactacaccattgagaacttg
aatcccagctcgcactacgttatcacactgaaggccttcaacaacgtgggggagggaatc
cctgtgtatgagagcgccgtcactcgaccccaatcagaccccatagaccctgatgttgat
ttgtacgaacttttccatgctccatacactccagtaccagaccctttacccatactgcct
cccgtgggtgttcaggcgtccgttctaaactacgacaccatcaaagtcacctgggcggac
aactcgctgcccaagaaccagaagatcacagatgcacgttactacacagtgcgctggaag
accaacatacccgcaaacacaaagtttaaggtggctaataccaccacactaactcacact
gtgacgggtctcaaacctaacaccttgtacgagttctcggtcatggtgaccaagggccgg
aggaccagcacctggagcatgactgcacatggaacaacttttgaagcaatcccaagttct
ggaccaaaagatgtgactgtagtgagcaaagagggccgaccacgaaccatcatcatcaac
tggcagccaccttcagaagccaatggcaagataacaggttacatcatttactacagcact
gatgtgaatgctgaggttcatgactgggtcattgagccagtagtggggaacaggcttacc
catcagattcaagagctgacccttgataccacctattactttaagatccaggcacgcaac
tctaaggggatgggtcccatgtctgacgccgtccagttccgcactcctaaagcagaatcc
tctgacaaaatggctaatgaccaagctccaggtatattggtgaaacaaggaagaccctct
gcaccagaacaaggttttggatcagttgggaaaacagatatgtctggcactggtgataac
cacatccttgttatcatcataattgtgtctgtgggtgcatttaccatcatcctggtggtg
gttggtgccttcttgtgtacacgccgtaccacaacacagcagaaaaagaaacgtgcagcc
tgcaagtccaccaatggatcccacaagtataaggcaaattccaaagatctgaagccacca
gacctctggatccaccacgaacgtttggagctaaaacctatcgacaaatcgcctgaatcc
aatccagtcatgactgacacaccaatcccccgaacctcccaagacatcaccccagtggat
gggtctatggatcctatgctccagagacgcaactcctatcgtggccatgaatcagaggac
agcatgtctacactagctggccgtcggggaatgagacctaaaatgatgatgccctttgat
gcacaaccccctcagcctgtgattagtgctcaccccatccattccctcgataaccatcac
catcattatcacttgggcagcctggcctcaccaacacacagctatctccaccaccagagc
agcacacggtccatcgccacccccatctctcatctagacagggcagagtccacagagtcg
gtaaggaacacccctagtgctgatctgctccctccgtctgggcagctctcctgcaccact
gacctttcagagacagacataagctaccacagttcagccgctgaggaggagccagtattc
actacgcccacagcacatgttcgtcccacgcacccactcaagagttttgcagtgcctgcc
atcccagctcatcccatgtatgactcggcagcattacccagcactccactgctgtctcag
acagggcctcactcagttaaaacagcctctgtcggtacgttgggaaggacaagaactcct
atgcctgtcatagttccaagtgcaccagatgtctcggaaagcagcagactgtatgaagat
acagggagtaattatgagacggacgagttgacagaggaaatggcccatctggagggctta
atgaaggacctaaacgccatcacgacagcctga
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integrated database retrieval system