Carassius gibelio (silver crucian carp): 128016601
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Entry
128016601 CDS
T08819
Name
(RefSeq) leucine-rich repeat-containing protein 4C-like
KO
K07523
netrin-G1 ligand
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128016601
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
I-set
LRR_14
Ig_3
ig
LRR_9
Ig_2
V-set
LRRNT
LRR_RPS2
LRRCT
DUF7617
Sp38
Syndecan
Motif
Other DBs
NCBI-GeneID:
128016601
NCBI-ProteinID:
XP_052457201
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All DBs
Position
A7:complement(12899620..12934627)
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AA seq
633 aa
AA seq
DB search
MLNKMTSYHQCQMLRGPRWKGAWSDPLFLLLLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLKDVPDGISTNTRYLNLQDNQIQVIKVDSFKHLRHLEILQLSRNHIRNIEIGA
FNGLTSLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSDAFSRLPSLRRLDL
GELKRLSYISSGAFQGLSNLRYLNLGMCNLKEVPNIQPLIRLDELEMSGNQLTVIQPSSF
KGLVHLQKLWMMHAQVQTIERNSFDDLHSLRELNLAHNNLTFLPHDLFTPLHHLQRVHLH
HNPWNCNCDVLWLSWWLRETVPTNTSCCARCNSPPSLKGRYIGELDQSYFQCYAPVIAEP
PSDLNLTEGMGAKLKCRTNSVTSVSWLTPNGSIITHGALKMRISVQNDGTLYFTNVTIQD
TGTYTCIVSNTLGNISASAVLNVTSVDNSGFSYFTTVTVETVETSIDGESRTPVQPSFGW
ASSSTTRGTPIATEKAYTIPVTDIDIDGALNGLEEVMKTTKIIIGCFVAITLMAAVMLII
FYKMRKQHHQQDHDGPTRTMEIISVQELTSVPAIASHLALSPLEHEHYDPYTSYNSYKTA
YNHVSALNSLHSSVHEPLLIQASSKDNVQETQI
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgacctcttaccatcagtgccagatgttgagaggtcctagatggaaa
ggggcttggtctgaccccctgtttctcctgcttttagccctgcagttgcttgttgtcgct
ggattggtacgagcccaaacctgtccttccgtatgttcctgtagtaatcaatttagtaag
gtaatctgcacacgcagagggctaaaggatgtccctgatggcatctccaccaatacacgg
tatctaaaccttcaggacaatcagatccaagtcatcaaagtagacagtttcaagcatcta
cgacaccttgagattcttcagcttagtagaaaccatatccgcaacattgagattggcgcc
ttcaatgggctgaccagccttaacactctggagctttttgacaatcggctcacgaccatc
ccaaatggcgcctttgagtatctatcaaaactgaaagagctgtggcttaggaataaccct
atcgagagcataccgtctgatgccttcagtcgcttgccctccctgcggcggttggacttg
ggagagctgaagcgtctctcctacatttcgagtggagcatttcagggcttaagtaacctt
cggtacctgaatctgggcatgtgtaacctcaaagaggtccccaatattcagcccttgatt
cgcttggatgagctggagatgtctgggaaccagctcaccgtcattcaaccaagttctttt
aagggtctcgttcatcttcagaagctgtggatgatgcacgcccaagtccaaaccatagag
cgaaactcctttgatgacctgcactctttacgagagctcaacctggctcacaacaacctc
acctttttgccccatgatctcttcacgcctttgcaccacctgcagcgagtgcatttgcat
cacaatccctggaactgcaactgtgacgttctttggctgagctggtggctgagagagacc
gtacctacaaacaccagctgctgcgcccgctgcaattcccctcccagcctcaaggggcgc
tacattggcgagctagaccagagctattttcagtgctatgcgcccgttattgccgagcca
ccttccgacctcaatttgactgaaggaatgggggcaaaactgaaatgtcggacgaactca
gtgacctcagtcagctggctaactccaaatggctccatcataacacatggggctctcaag
atgcgcatctctgtccaaaacgacggaacattatacttcaccaacgtcaccatacaggac
acgggaacctacacttgcattgtaagcaatacactaggcaacatttcggcctctgctgtc
ctcaacgtgacgtccgttgacaacagtggctttagttacttcactacagtcaccgtagag
acagttgaaacctctatcgatggggagagtaggacaccggtgcagccttcttttggctgg
gcctcctcttcaaccacaaggggaacacctattgccacagagaaagcatacaccattcct
gtgaccgacatagacattgatggggctcttaatggtttggaggaggtgatgaaaaccacc
aagatcatcattggctgctttgtggccatcacgctcatggcggccgtaatgctcataatt
ttctacaagatgcgcaaacagcaccaccagcaggatcatgatgggccgacccgcaccatg
gagatcatcagtgtacaagagctgacgagtgttcctgctatagcgagtcacctggctctt
tcgcccctggagcatgagcattacgacccctatacctcctataactcctacaaaactgct
tataaccatgtgtcggctcttaactcactgcatagttcagtgcatgaaccattacttatt
caagccagctcaaaggataacgtgcaggagactcaaatttga
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