Carassius gibelio (silver crucian carp): 128016660
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Entry
128016660 CDS
T08819
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
128016660
Membrane trafficking [BR:
cgib04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
128016660
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRRNT
LRR_RPS2
LRR_9
V-set
Motif
Other DBs
NCBI-GeneID:
128016660
NCBI-ProteinID:
XP_052457299
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Position
A7:complement(15680245..15703696)
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AA seq
622 aa
AA seq
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MTFLQVTIKMVAREASGHSYLVACWQPILILMLGTVLSGSATGCPSRCECSAQERSVVCH
RRKLIALPEGIPIDTRLLDLSKNRLKAINPEEFLNYQHLEELQLNENIISAIEPGAFSNL
LGLRILGLRNNKLKLIQLGVFTGLSNLTRLDISENKIVILLDLVFQDLYNLKELEVGDND
LVFISHRAFHGLSSLEQLTMERCNLTSVPTEAFSHLHNLLTLRLRHLNINIIRDFSFRRL
YRLKFLEIANWPLLETLTTKSLHGLNITTLSITNCNLTAVPYEAIQHLVYLRFFNLSFNP
IEVVEGNKMHNLLRLQAFHLVGGRLVSIEPYSFRGLNYLRVLNVSSNSLSTLEESAFHSV
GNLETLALHDNPLACDCRLLWVFRRRWRLNFNRQQPSCESPEFLQGKEFKDFPDVLPPNY
FTCQKSKIQDQKAIHRFVDEGTTVQFPCKADGDPAPMIMWQSPKKQIITTKSIGRLSVSP
DGTLEVRYAQIQDNGTYTCIAVNAGGNDTRLAHLHIHSYSPNWPHQPNKTFAFISNQPND
SGANGTGATNPFPFDMKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNVKPNIEIEYV
PRKVDGESSPTEGSHKISMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttctgcaggttaccatcaaaatggtggccagagaggcaagtgggcacagctac
ctggtggcgtgctggcagcccattctcatcctgatgctgggtaccgtgctgtccggatct
gccactggctgcccctctcgctgtgagtgcagtgcccaagagcgctcggtcgtgtgccat
cggcggaagctgatcgccctccctgagggaattcccattgacacgcggctgttagatctc
agcaaaaaccgcttgaaagccatcaacccggaggaattcctcaactatcaacacttggag
gagctacagctgaatgagaacatcatttctgccattgaaccaggggccttcagcaacctc
cttggcttgcgaatattgggactacgcaacaacaagctgaagctgatacagcttggtgtt
ttcactggcctcagtaacctcactcgattagatattagtgagaataaaatagtaattttg
ttggaccttgtgtttcaagatctctacaacctaaaagaactggaggttggagacaacgac
ctggtgttcatctctcacagagcttttcatggccttagcagcctagagcagctcactatg
gaaagatgcaacctgacctctgtgccaacagaggccttcagtcatcttcacaacctgctg
accctcagactgcgacatctcaacatcaacatcattcgagacttttccttcaggaggcta
tatcgactcaaattcttagagatagcaaactggcctctattagaaaccttgaccaccaag
tccctccatggacttaacatcacaaccttgagcataacaaactgcaatctcactgccgtc
ccttatgaggccattcagcaccttgtgtaccttcgatttttcaacctgtccttcaatcca
attgaggttgtggaaggcaacaaaatgcacaatttgttgaggctccaggcatttcatttg
gttgggggcaggctagtcagcattgagccttattcgttcagaggactcaactaccttcgg
gttctcaatgtatccagcaatagtctaagcactttagaggagtctgccttccattcagtt
ggcaacctggagacactggctcttcacgacaaccccctggcatgtgactgtcgtctcctc
tgggtctttcgccgccgatggagacttaacttcaaccgccagcagccatcttgtgaatca
ccagagtttttgcagggtaaagaattcaaagacttcccggatgttctccctccgaattat
ttcacctgtcagaaatccaagatccaggatcaaaaagccattcatagatttgtggatgag
gggaccactgtccaatttccttgcaaagcagatggagaccccgctcccatgattatgtgg
cagtctccaaaaaagcaaattatcactacaaaaagcattggccggctgtctgtgtctccg
gacggcaccctagaggttagatatgcccaaatacaagacaatggcacatacacctgcatt
gctgtcaatgcaggaggtaacgacacccgtttggctcacctacacattcatagctactct
cccaattggccccatcagcctaataagacctttgccttcatctcaaaccagcccaatgat
agcggtgccaatggaactggtgcgacgaatccctttccctttgatatgaagactctcatt
atcgctaccaccatgggatttatctctttcctgggagtggtactgttctgtctggtgctc
ttgttcctctggagccgagggaaaggcaatgtcaagccaaacattgagattgagtatgtg
ccacggaaagtagatggagaaagcagcccgactgagggatctcacaagatcagtatgaaa
atgatttaa
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