Carassius gibelio (silver crucian carp): 128016668
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Entry
128016668 CDS
T08819
Name
(RefSeq) neural-cadherin-like
KO
K27892
neural-cadherin
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
128016668
Cell adhesion molecules [BR:
cgib04515
]
Cadherins
Cadherin related
128016668
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Ig_Shg
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_pro
EGF
Cadherin_4
hEGF
Y_Y_Y
EGF_2
Big_9
Motif
Other DBs
NCBI-GeneID:
128016668
NCBI-ProteinID:
XP_052457316
LinkDB
All DBs
Position
A7:16034418..16277015
Genome browser
AA seq
2899 aa
AA seq
DB search
MFWTILLPYCVTFVLGNKTDERIPFFHGHVFENSPPGSKVNGLSIPVKRIDPQRWCSKSG
MHLKLLGDRSEDFHVFAHHKRGHILLKTSNVLDREECAEYLLSLALCCQSCASAERVVAE
VASVKVDVLDTNDHEPTFQHADVKITLDDATALRSVVYTVKAEDIDSGKNAELIYYALPR
NGSFYVVPKTGDILLVDSILGLAHSIKFSVFARDHGWPARTSQNMDVEISPRQWPALPTL
DNGLSRKSRSVPEPVLITVSEDASIGSVIMNLYPVRFQSASFELIHPDADNSPVTVSRDS
GDLVISRRLDRETQPLVEITVKVQDKRGSDWYTVRVDLTVMDVNDNAPEWTMVPYPYLSV
VSANAPPNTLVYKLQAKDGDEGINGEVEYFLSDGGDGRFEVDRKNGHLRTTGLPLQRDRE
YLLTVVAADRQGSRSPPAIVSIIAGPRAPQFTNVSYTISIPENTPEGQPFLVTPAVSFQK
QPVTYSLLINPSSLFSIQPETGEISLTRTIDYESDQHHYLLLVRASENQDSLSSAAEVRV
IITDENDCVPEFQQSIYSKDGVPETVTTATSLLQVSASDCDSEQNAEITYYTLSPDFIIS
AHGTIFPAVPLDYERPNHLYEFVVMAVDKGEVPRTGTATVRLRMANVNDEPPEFSQPVYR
TFVSEDAGPNTLVATVLAKDPDGDGITYKITAGNQEGNFVIDSQKGLIRLRSSPSPRLQG
LKYILNVTATDDNASGGPQSLSAIVQVIVGVDDVNNNKPVFEKCAEYKDKASVLENKPEG
TFVLQVHAVDADEGANGKVTYGFMHKDSTVPAFSIDPETGVIITAVTFDRERQREYAVTV
TATDQAADPLIGICQLNIFILDENDNSPKFENLRYEYFLREDTMIGTSFLRVAAHDDDYS
TNAAITYSMSEEQPEYLRVNPLTGWIYVDQAISQRTYISRQIIATDGGNRSSSVELAVTI
TNVKNQPPQWEKDKYEVVIPENIVRDTPVVTIKATSPLGDPRVTYNLEDGLVPESNMPVR
FYLTPNREDGSASILVAEPLDYETTRNFMLRVRAQNVAPVPLAAFTTVHINITDVNDNVP
FFTSSIYEASVTEGAEIGTLLLQVSANDLDLGLNGKISYSLLNDRSGDYQYFRIDPELGT
IYTEAVFDRETKGSYLLEVKSVDGWESGRPGKHGQPNSDTAYVRIFISDVNDNKPVFAQS
VYEVDVDEDADVGSTILTVSANDEDEGANAKLRYQITSGNVGGVFDMEPEVGTIFIAQPL
DYEQNKLYKLHVLASDGKWEDYATVIVTIVNKNDEAPVFSVNEYYGSVTEEMDGSPVFVL
KVTASDPDKDADQEALRYSLHGQGAESEFIIDEVTGKIYAQRTLDREARAVWRFVVLATD
EGGEGLTGFTDVIINVWDINDNAPIFACAPDSCHGDVPENSPPGTSVMEMTATDLDDAAV
GQNAVLAYRIVGNAALNGANSGADVFNINPATGTVSVAMSGLDREQTDSYVLVVEARDGG
GMIGTATATIHVTDVNDHVPRFLDRMCSIRIPESSEPNTPIIELAAEDADAGENGQLTFS
VVAGDPEQKFYMVSHRQEQRATLRLKKHLDYERPGEQHFNLTIKVEDMQYSSLLRCTLEV
EDCNDHVPVFIPHFIQLPALREDVASGTSVASVAASDLDSGLNREITYSIASESDPYHLF
SVDQSGLVTVASELDREKVAHHHLVILATDHGTPPLTGTATIQMALLDVNDNGPEFEAAY
APIVWENVLGPQVVQLNQSSTLLKAMDRDSEENGSPFSFSVPLEYRYSNDFHLQDNGNDT
ATITALRAFDRERQKEFLLPVIMTDSGNPPKTVTNTLTITIGDENDHAHIAGQKKVFINC
HRGRMPTNVLGKVYSPDPDDWDNKTYAFEGRVPNYFILNKRTGFLIIKENAPPGSYDFQV
RVSDGVWPDAISSVKVNVRELRDDAIYNSASLRLADISAIEFMEGRGNLKSRYELLGDFL
SDMLSVGADDVNVFSLVEVRHRTLDVRFSIHSAPFLRAERIHGYLAAHKQKLQSFLQVNV
TQVHVDECVDADCRGGGGCTSHLSVTDKPAVVDSGSMALVSVTVEATAVCSCSAREHLHQ
SCSVYPRTPCHNGGVCVDTQSGYRCQCPAQFEGPECQQTKHSFHGNGYAWFPPLRPCFES
HLSLEFITEVADGLLLYSGPLSQLQQWEPEDFMAIELIDGTPTLKINHGSGTLVLQLPGN
VNVADRRWHRLDVRSNSKEVRFTLDRCAGATIMEMEGVGSWLTTEDHTSCEVTGITPNMD
KHLNVTQVLQLGGVNENLPYIYPQLQHKHFTGCIRNLIVDSKFYDLSSPADSSGSAPGCL
MTDNSCVNMGFPSCGTRGRCHGEWGSFSCQCTPGYSGHQCEKEVPEYSFDGRSHIHFQLA
FTLPARHTQVQVLVRTRKHSSSILSLLSKEQNEYLKLEIYQGLLSVFYNLGDGDFNLTLP
SYRLDNGEWHDIDLDRHDNEMTLRLDGGGGRREVTGLPGRSREIVIDPAVVMLGNSFPSG
HNKSFQGCMRDLRLNGRFIPLDGQAREGVSVVSSQGVSLGCSSDSCRKNQCSPPFTCVDL
WRIHECRCPPGHMVKANSTGKFCVYTLCASRPCHKGTCVAQSPSKFTCHCPEGYRGPHCE
VTLAIYRDDVGLSFSSLFAICICFMALLVLLLGIFLYTRWRSYKGLKEGVYHVSAHHDGW
EDIRENVLNYDEEGGGEEDQNAYDMAELQKSLQPSPAQSVQYSRSLAIHHHPPSQQKQQH
FCQPEPLTRVGTATTTTSSGTATIRRDVPPCRSPAQGQTANPSRAAQLARKSLSFSSQDL
ARYLCEIIRDADQHPETAPFDSLQVFSTEGGGSLAGSLSSFSSVGLEEGTAAGQECLKEW
GPRFEKLKALYERAEGSDL
NT seq
8700 nt
NT seq
+upstream
nt +downstream
nt
atgttttggactattctgttgccatattgtgtgacttttgtattgggaaataagaccgac
gaacgaatacctttcttccacggccatgtgtttgaaaactctccacctggctcaaaagtg
aacggactgagcattccggtgaagcgcatcgacccgcagagatggtgctccaagtccggg
atgcacctgaaactcctgggggacaggagtgaagattttcacgtcttcgcgcaccacaag
cgaggacacatattgctgaaaacatctaacgttctcgaccgagaggagtgcgcggagtat
ctcctcagtctggcgctgtgctgtcagagctgcgcttcagccgagcgcgtcgtggccgaa
gttgcctctgttaaagtggacgtgctcgacacgaacgaccacgagcccactttccaacat
gcagacgtgaaaataactttggacgacgccacggccctgagatcggtggtgtacacggtg
aaagcggaggacattgacagcggcaaaaacgccgagctcatatactacgcgctcccgaga
aacggcagtttctatgtagtgcccaaaaccggcgacatcctcctggtagactcgattctc
ggtcttgcgcactccataaagttcagcgtgtttgcgcgagaccacggctggcccgctcgg
accagtcagaatatggatgtagagatcagtccgcgccaatggccagctcttcctacgctc
gataacggactctcgagaaagtcccgctccgtgccggagccggtgcttatcaccgtgtcc
gaagacgcgagtatcggctccgtcataatgaatctgtacccggtgaggtttcagtccgcc
agttttgagcttattcacccggacgcggataactctcccgtcaccgtgagtcgggacagc
ggagatttggttatatcaaggcggctcgaccgagagacgcagccgctagtggagataact
gtcaaagtgcaggataagcgaggttcagactggtatacagtaagagtggatttgacggtg
atggatgtcaatgataatgccccagaatggacgatggtcccttacccctacctgagtgtg
gtgtctgctaatgccccaccaaacacactagtctacaagcttcaagccaaagatggtgac
gagggcatcaatggagaggtagaatacttcctgtcggatggaggtgacgggagatttgaa
gtggacaggaagaatggtcacttgcggacgacaggcctccccctgcaaagagacagagaa
tacctactcacagtggtggctgctgatcgacagggcagccgcagtcctcctgctatagta
tccatcatcgcaggcccaagagctcctcagttcaccaacgtgtcttatacaatttccata
ccagaaaacacaccagaagggcaacccttcctagtcactccagcagtgtccttccaaaaa
cagccagtaacttacagcctgctcatcaatcccagcagtcttttcagcatccagccagag
acgggggagatcagtctgacccgtactatagactatgagagcgaccagcaccactacctg
ctgctggtgcgggccagtgagaatcaggacagtctcagtagtgctgctgaggtgcgagtg
atcatcacagatgagaatgactgtgttcctgagttccagcagtccatttatagcaaagac
ggcgtccctgagacagtcacgactgcaacatcgcttctgcaggtatcagccagcgattgt
gattcggagcagaatgcagagatcacctactacacacttagtccagatttcatcatttca
gcccatggtacaatatttccggcagtccctctggattatgagaggcctaaccacctgtat
gaattcgtagtgatggcggtggataagggcgaggtgccccgcaccggcacagccaccgtg
cgtcttcgtatggccaatgtcaacgatgagcctccagagttctcgcagcctgtgtatcgg
acctttgtctccgaggatgcagggcccaacaccctggttgcaacagtcctggccaaggac
ccagatggagatgggatcacatacaaaattacagcaggcaaccaggagggcaactttgtc
atcgacagccagaaaggattgatccgtctccgctccagcccatctcctagacttcaggga
ctaaagtacatcctgaatgtaacagctacagatgataatgcctccggtgggccgcagtct
ctctccgccattgtccaggtcattgtaggagttgatgatgtcaacaacaacaaacctgtg
tttgaaaagtgtgctgagtataaagacaaggcatcagttctggaaaataaaccagaagga
acatttgtgctgcaggtccatgcagttgatgctgatgaaggagccaatggaaaagtcaca
tatggttttatgcataaagacagcactgtccctgccttcagcattgatccagaaacaggt
gttattataactgctgtgacatttgatcgggagaggcagagagagtatgcagtaacagtg
acggccacggaccaagcggcggaccccctcataggcatctgccagctcaacatttttatc
ctcgacgagaatgacaacagccccaaatttgagaacctgcgctacgaatacttcttacgt
gaggacaccatgatcgggaccagttttctgcgagtggctgcgcatgatgatgattacagc
actaacgcggccatcacttactccatgtccgaggagcagccggagtatctacgtgtgaat
ccactcactggctggatctacgtggaccaggcaatctcgcagaggacctacatcagcagg
cagatcattgctacagatggaggcaatcggagcagttcagtcgagctggcagtcaccatc
actaacgtgaagaaccagcctccacagtgggagaaggacaaatatgaggtcgtcatacct
gaaaacattgtcagagacactccagtagtgactatcaaggccacctctccactgggcgac
ccgagggttacttataacttggaggatggattggtgccagagagcaacatgcctgttcgt
ttttacctaaccccgaatcgtgaagatggctctgcctctatacttgtcgcagagcccttg
gactatgagacgacccgcaacttcatgcttagggttcgagctcagaacgtggctcctgtt
cctctggctgccttcactactgttcacataaacatcacagatgtcaatgacaacgttcca
ttcttcacctcctccatatacgaggcatctgtgactgaaggggcggaaattgggactcta
cttcttcaagtttcagctaatgatcttgacctgggactgaatgggaagatctcatactcc
ctactgaatgaccgtagtggagactatcagtacttccgcattgatccagagctgggcacc
atctacacagaggctgtgtttgatcgagagaccaagggatcttaccttttggaagtgaag
tcagtagatggctgggaatcaggcaggccagggaaacatggacagcctaactcagatact
gcgtatgtgcgtattttcatcagcgacgtgaatgataacaagccagtgtttgctcagtct
gtgtatgaagtcgacgtggatgaggatgctgacgtgggctccaccatcctcacagtcagc
gctaatgatgaagatgaaggtgctaatgccaagttgcgctaccaaattacatcaggcaat
gtaggaggtgtttttgacatggagcccgaggtcggaaccatcttcattgcccagccactg
gactatgaacagaacaagctctataagttgcacgtcttggcctctgatggaaagtgggaa
gattatgctactgtaatagtcaccattgtgaataagaatgatgaggcacctgtgttctct
gtgaacgagtactacggcagcgtgacagaggagatggacggttctcctgtctttgtgttg
aaggtaacagcatctgacccagataaggatgctgaccaggaagctttgagatattccctt
catggtcaaggtgctgagagcgagttcatcattgatgaggtgactgggaagatttatgct
cagagaacattagaccgcgaggcccgggcagtgtggcgttttgtggttctggcaacggat
gagggtggcgagggactaacaggtttcaccgatgtcattatcaacgtgtgggacataaac
gacaacgctcctatttttgcttgtgccccagacagttgccatggtgatgtacctgagaac
tccccacctggcacttccgtcatggaaatgacagccactgatctagatgatgcagctgtc
ggacaaaatgcagtgctggcctatagaattgtgggtaatgctgccctaaatggagctaac
agcggagcagatgtgttcaatatcaatcccgccactgggactgtttcagtggcaatgtct
ggtctggacagggagcagactgactcatatgtcttggttgtggaagcacgagatggtgga
ggtatgataggaacagccacagcgactatacacgtgacagatgtcaatgaccacgtccca
cgtttcctggaccgcatgtgctccatacgcattcctgagagcagtgagcccaacacacca
atcatagagcttgctgcagaggatgcggatgctggagaaaatggtcagctgacctttagt
gtggtggccggtgatcccgaacagaagttttacatggtgagtcatcgacaggagcaacgc
gcaacccttcgtctcaagaagcatctggactacgaaagaccaggtgagcaacacttcaac
ctcaccataaaagtggaagatatgcagtactccagcctgctgcgctgcactctagaggtt
gaagactgcaatgaccatgtgccagtcttcattcctcactttatacagcttccagcctta
cgagaggatgtcgcttcaggaactagcgtggcgagtgtggctgccagtgatttggactca
gggttgaatcgtgaaatcacttatagtattgcttcagagtctgatccgtaccatctgttt
tctgtggaccagtctgggttggtcactgtggctagtgagctggacagagaaaaggtcgca
caccatcatttggttatacttgcgacagaccatggcacgccaccattgactggcaccgca
actatccagatggctctgctggatgtcaacgacaacggccctgagtttgaggctgcatat
gcaccaatagtgtgggagaatgttttgggcccacaggttgtgcagcttaaccagagctcc
acattactgaaagcaatggaccgagattcagaggagaatggctcacccttttccttttct
gttcctctggagtatcgttacagtaatgatttccacctgcaggataatgggaatgacact
gccaccatcaccgccctgagagccttcgacagagagagacagaaagagtttctactgcct
gtcatcatgactgatagtggcaatccaccgaagaccgtcacgaacacactcactatcacc
atcggcgatgagaatgaccacgcccacatagctggacagaagaaagtgttcatcaactgt
cacagagggagaatgccaaccaatgtcctggggaaggtttactcaccagatccagatgac
tgggataacaagacatatgcctttgagggacgtgttcctaattattttatcctgaacaag
cggacaggattcctcatcataaaggagaacgctcctcctgggagttatgactttcaagtt
cgagtgtcagatggggtttggccggatgccatctctagtgtgaaggtgaatgtgagagag
ctacgggacgatgccatctacaactcagcctcactgagattagcagacatctccgccata
gagttcatggaaggtcgtgggaatctgaagagcaggtacgagctgctgggcgacttcctg
tcagacatgctgtctgtgggggcagatgatgtcaatgttttcagtctggtggaagtgcgg
cacaggactctggatgtgaggttctccattcacagcgcaccgttcctcagagcagaaaga
atccatggataccttgcagctcataaacaaaaactccagtcttttcttcaagtcaacgtg
acccaagttcatgtagatgagtgtgtggatgctgactgtcggggaggagggggctgcacc
agccatctgagcgtcactgacaagccggcggtggtcgactcgggcagcatggctctggtg
tcggtgactgtggaagccacagctgtctgcagttgctcagcacgtgaacacctccaccag
agctgctctgtgtatcccagaaccccctgccacaatggaggagtctgtgtggacacgcag
agcggatacagatgccagtgcccggctcagtttgagggacccgagtgccagcagacaaaa
cacagtttccatggcaatggctatgcttggtttccccctttaaggccatgcttcgagagc
cacctctcgctggagttcatcacagaggtggcagatggcttgctgctctacagcggaccc
ctctcccagcttcagcagtgggagccggaggacttcatggccatagaactgatcgacggc
actcccaccctgaaaattaaccacggctcgggtacattggtcctgcagttgccgggcaac
gtgaatgtagcggacagacgttggcacagactggacgtgaggagcaacagcaaagaggtt
cgttttacacttgaccgctgtgcaggagccactatcatggagatggagggagtgggcagc
tggctaactactgaagaccacacttcatgtgaagttactggcatcacaccaaacatggac
aagcatctgaacgtgacacaggtgcttcagctgggaggagtgaatgagaacctgccatat
atctacccacaactacaacacaagcactttacgggctgtatccgaaaccttatcgtggac
agcaagttttatgacctcagttcaccagctgattcctctggtagtgctccaggatgtcta
atgacggacaatagttgtgtgaacatgggctttccttcctgtgggacccggggccgctgc
catggagagtggggttccttcagctgtcagtgcacacctgggtacagcgggcatcagtgt
gaaaaggaggtccctgagtattcttttgatggaaggagtcacatacactttcagctggcc
ttcactctcccagccagacacacacaggttcaggtcctggtccggacacgcaaacacagt
agctctatcctcagcctgctgtccaaagaacagaatgaatatctcaaactggagatctat
cagggtctgttaagtgtcttctacaacctcggtgatggggacttcaacttgacattgccc
tcttatcgtttagacaacggagagtggcatgacattgacttagatcgtcatgacaatgag
atgactctgcgtctggacggcgggggaggacggcgcgaggtcacgggattgccgggtcgc
agtcgggagatagttattgatcctgctgtggtgatgctgggcaactcattcccctcagga
cacaacaagagcttccaaggctgtatgcgggacttgagactcaatgggcggtttattcct
ctggacggtcaggctagagagggagtgtcagtggtcagttctcaaggtgtctctctgggt
tgttcctctgactcctgccgtaaaaaccagtgtagccccccatttacctgtgtggacctg
tggagaatccatgaatgcaggtgtcccccaggtcacatggtcaaggcaaactccactggc
aaattttgcgtgtacacactatgtgccagccgcccgtgtcataagggtacttgtgtggca
cagtctccctctaaattcacctgccattgtccagagggctaccgcgggccgcactgcgag
gtgacactggccatctacagagacgacgtgggtctcagtttcagctccctctttgccata
tgcatctgctttatggccctactagtgctgctgttggggattttcctctacacacgctgg
cggagctataaggggctgaaggagggggtgtatcacgtgtctgcacaccatgacggatgg
gaagacatccgagaaaatgtgctcaactatgacgaggagggcggaggggaggaggatcag
aatgcctatgacatggcagagctccagaagtccctgcagcccagcccggcccagtcggtg
cagtacagccgatcgctagccattcaccaccaccctccctcccagcagaaacagcaacac
ttttgccaacctgaacccctcaccagagtgggtacggccaccaccaccacctcctcagga
accgccaccattcgtagggatgtacccccctgccgctctccggctcaaggccagactgca
aatcccagccgagcggcccagctggcccgcaagagcttgtcgttctccagccaggacctg
gcacgctacctgtgtgaaattatccgtgatgccgaccagcacccggagacggcacccttc
gactccctgcaggtcttctccacggaggggggcggctcgctagccgggtcactgagttcc
ttcagctccgttgggctggaagagggaacggcggcaggtcaagagtgtttgaaagagtgg
gggccgcgctttgagaagctgaaagccctctatgagcgggccgagggcagcgacctctaa
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