Carassius gibelio (silver crucian carp): 128016745
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Entry
128016745 CDS
T08819
Name
(RefSeq) transcriptional repressor NF-X1-like isoform X1
KO
K12236
transcriptional repressor NF-X1
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
128016745
04121 Ubiquitin system [BR:
cgib04121
]
128016745
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
128016745
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
128016745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
R3H
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
128016745
NCBI-ProteinID:
XP_052457417
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All DBs
Position
A7:19897958..19910683
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AA seq
1283 aa
AA seq
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MAEASVIDAPKLNPESAEFVPQAKPNQPPFRRNYRQQHHGQDWRAQHVRPHHHFRQSSAS
QDEFENPANNTLAPAQLPIREDLRGRGRGGRQRGGRGDGRRSNDHCPPYERCKKPGSDHD
CSGRGRGACGRERPNSPTSYRSTDEEKKERTTVEAHVRKSYNDSRRKQPNRAQAERWIKG
PLPRDQEENRENQTDAGDTRPAAVHEHPEPEQRNHKGWRGGERCMHPNSRRKGQAPNHGI
EGNWREREPAQNIREERRGAEDEGGRQEESNRNRGAMRGEERRGAEGEGGRQEESNRNRG
GAKGEERRGAEGEGGRHEESNRNRGAMRGEERRGAEDEGGRQEEFNRNRRGAKGGERRGA
EDEGGRQEEFNRNRRGAKGEERRGAEDEGGRQEEFNRNRRGAKGEERRGAEGEGRRQEES
NRNRGGARGEERRGAEDEGGRHEESNRNRGGARGEVRRHEESNMNRGAVRGKRPLLQNAG
LGRGGGPERRTGPVKRIEPPKSKETQTGCLIEQLTEEKYECMVCCEVIRLIAPVWSCQSC
YHVFHLNCIKKWARSPASQADDAPEGWRCPACQNVALKAPNAYTCFCGKVTNPEFQRTEI
PHSCGDMCGKKRSGGECNHPCNILCHPGPCPQCPAFITKSCICGRMSKQVRCSQAGPLLC
EEVCGALLNCSKHFCAQVCHSGPCQPCPLRVQQACFCGVVFREVACGTDCGHFDGSGYFS
CCKTCGKMLDCQSHRCQQLCHPGQCPSCPLSPKLVRSCSCGQTPLSKLLELGYPERKNCT
DPIPSCGKTCNKPLPCGDDDSVHLCEKLCHEDSCGPCSLTSSIKCRCGSNSKEVPCAAIQ
TEQDMMFTCEKRCIRKRSCGRHKCGEMCCVDLEHKCSMICGYKLNCGLHRCQDLCHRGNC
QPCWQTSFDELACYCGETVLFPPIPCGTRPPECKNLCTRSHDCDHPVFHSCHTEERCPPC
TYLTKKWCMGNHEQRSNIPCHLQDISCGLACDKLLPCGSHRCKKICHRGECQAEGECKQP
CTHPRTSCGHPCAAPCHPGTPCPPTVCSAKVALKCDCGRRKETIPCTDAASSYQRYAAIS
VASKLSDMQLGESVDIGQLTKKEQRKARLECDQECATLERNRRLAEALQIDQAVDTFKSA
SSKYSDSLKEDARKDFKFVSEIEEEIKNLVELANKGKQTKRSHCFPPMKREHRRIIHELA
EAYGVESVSYDSEPKRNVVITAIRGKAVCPNTSLAALVERETVSRAPPPIAHIKQQTSKA
DNSDAWKKQSREDLSIDYFDVQD
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagcgtccgttatagatgcaccgaagttgaatcccgagtctgcggagtttgta
ccccaagctaaacccaaccagcccccctttaggagaaattacaggcagcagcaccacggt
caggactggagggctcaacatgttaggcctcatcaccactttagacagtccagtgcgagt
caagatgagtttgaaaaccctgccaataatacattagctcctgctcagcttcccattaga
gaagacttgagaggtaggggtcgaggagggagacaaagaggaggacgtggtgatggtcgg
cgcagtaatgaccattgccctccgtacgagagatgcaagaaacctggaagtgatcatgac
tgctcaggaagaggccgtggagcttgtggccgtgagcgacctaactcacccacttcttat
agatccacagatgaggagaagaaagaaagaacaactgtggaagcccatgtgagaaagtct
tataatgacagccgacgcaagcagcccaatagagcacaagctgagagatggataaagggg
cctcttcccagggaccaagaggagaaccgggaaaaccagactgatgcaggagacacaagg
cctgcagcagttcacgaacatccagagcctgagcagaggaatcataagggatggagaggt
ggagagcggtgcatgcaccccaattcccggaggaaaggacaggcacctaaccatgggatt
gagggtaactggagagaaagagaacctgctcagaacatcagggaggagaggagaggtgca
gaagatgagggtggaagacaggaggagtctaacaggaacagaggagctatgagaggggag
gagagaagaggtgcagaaggtgaggggggaagacaggaggagtctaacaggaacagagga
ggtgcgaaaggggaggagaggagaggtgcagaaggtgagggtggaagacatgaggagtcc
aacaggaacagaggagctatgagaggggaggagagaagaggtgcagaagatgagggagga
agacaggaggagttcaacaggaacagacgaggtgcgaaagggggggagagaagaggtgca
gaagatgagggaggaagacaggaggagttcaacaggaacagacgaggtgcgaaaggggag
gagaggagaggtgcagaagatgagggtggaagacaggaggagttcaacaggaacagacga
ggtgcgaaaggggaggagaggagaggtgcagaaggtgagggcagaagacaagaggaatcc
aacagaaacagaggaggtgcgagaggggaggagagaagaggtgcagaagatgagggagga
agacatgaggagtccaacaggaacagaggaggtgcgagaggggaggtcagaagacatgag
gagtccaacatgaacagaggagctgtgagagggaaaaggccacttctgcagaatgcagga
ctggggagaggtgggggtcctgagcgacggaccggaccggtgaagcgcattgagcctccc
aaaagcaaagaaacccagacaggttgtctgattgagcagctgacggaggagaagtatgag
tgtatggtctgttgtgaagtgattcggctcattgctccagtttggagctgtcagagctgt
taccacgtatttcaccttaactgcatcaagaaatgggctcgctcacctgcatctcaagct
gatgatgcccctgaaggatggcgttgtcctgcatgccagaatgtggcacttaaagcccca
aatgcgtatacctgcttctgtgggaaggtgaccaatcctgagtttcagcgcactgagatc
cctcatagctgtggggatatgtgtgggaaaaagaggagtggaggggaatgcaatcacccc
tgtaatatcttgtgccatcctgggccctgcccgcagtgtccagcttttatcacaaagtcc
tgcatttgtggtagaatgagtaagcaggttcgttgcagtcaggctggacctctgctttgt
gaggaagtctgtggggctcttctgaactgctcaaagcacttctgtgcccaggtgtgccac
tcagggccatgccaaccctgcccacttcgtgttcagcaagcttgcttttgtggtgtggtg
ttcagggaggtggcatgtgggactgattgtggccattttgatggatcaggatatttctcc
tgttgcaaaacctgtggaaagatgctggactgccagtcccatcgctgtcagcagttatgc
caccctgggcagtgtccgtcatgtccactcagccccaagctggtgcgcagctgttcgtgt
ggacagactccattatctaaacttctagagctcggctacccagagagaaagaactgtact
gacccgatcccctcctgtggcaagacctgcaacaaaccactgccatgtggagatgatgat
tctgtccacttgtgtgaaaagctctgccacgaggacagctgtgggccgtgctctttgacc
tcctctattaaatgcagatgtggcagcaacagcaaggaagttccttgtgcagccattcag
actgaacaagacatgatgtttacgtgtgagaaacgctgcatcaggaagcgctcctgcggc
agacacaagtgtggggagatgtgttgtgtggatctggagcataagtgctcaatgatttgt
ggttacaagctcaattgcggtctacatcgatgtcaggacctttgccaccgtgggaactgc
cagccttgttggcaaaccagttttgatgagttggcgtgctactgcggggagactgtgctc
ttcccgcccatcccttgtggaaccagaccccctgaatgtaaaaacttatgtacccgaagt
catgattgtgatcatccagtgttccattcatgccacactgaggagagatgtccaccctgt
acctacctcaccaagaagtggtgcatgggtaatcatgagcaaaggagtaatatcccatgc
cacctgcaggacatctcgtgtggtttagcgtgtgataagctcttaccctgcggttcgcat
cgctgtaagaaaatatgtcaccgtggtgaatgccaggcagagggagagtgtaagcagcca
tgcactcaccctagaacaagctgtggacacccctgtgctgctccctgccacccaggcacc
ccctgtccacccactgtctgcagtgccaaggtggcactgaagtgtgactgtggccgaagg
aaagagactattccttgcactgatgcagctagttcctatcaaagatatgcagctatttcc
gttgccagtaagctgtcagatatgcagctgggagagtccgtagacattggacagctgacg
aagaaagagcagagaaaggccaggttggagtgtgatcaagaatgtgctacactggagagg
aacaggcggctggccgaggccctgcagattgatcaggcggtggataccttcaagtcagcg
tcttccaaatatagtgactctctcaaagaagatgcaaggaaagatttcaagtttgtcagt
gaaattgaggaggagattaagaatttagttgaactggctaacaagggtaaacagactaag
aggagtcactgttttccacctatgaagcgtgaacacaggagaataatccatgagcttgcg
gaggcttatggtgtggaaagcgtcagctatgatagtgaacccaagcgcaatgtagtgatc
actgccatcagggggaaagcagtgtgtcctaacactagtctggctgctttggttgaaagg
gaaactgtctccagagccccccctcctattgcccacatcaaacaacaaaccagcaaggcc
gacaacagtgatgcttggaagaaacaatctagagaggatctctccattgattattttgat
gtgcaggattga
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