Carassius gibelio (silver crucian carp): 128016749
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Entry
128016749 CDS
T08819
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128016749
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_14
LRR_8
LRR_4
PDZ_2
LRR_1
LRR_LRWD1
LRR_9
LRR_13
Motif
Other DBs
NCBI-GeneID:
128016749
NCBI-ProteinID:
XP_052457460
LinkDB
All DBs
Position
A7:complement(20023403..20096212)
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AA seq
1890 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCSLTAVPDEIYRYNRSLEELLLDANQLRELPKPFFRLHN
LRKLGLSDNEIQKLPPEIANFTQLVEMDISRNDISEIPENIQLCQALEIADFSGNPLSRL
PDGLTQLRGLAHLSLNDVSLQSLPNDIGNLSNLVTLELRENLLKSLPSSLSFLVKLEQLD
LGSNLLEVLPDTLGALPNLRELWLDKNQLSLLPPELGNLRQLVCLDVSENRLSELPTEIS
GLITLTDLLLSENILEVLPDSIGSLKKLSILKLNQNRLVHLTDSLGECENLTELMLTENL
LQSLPRSLGKLKNLTNLNVDRNHLSSVPAELGGCVSLNVLSLRDNRLGKLPTELGNATEL
HVLDVAGNRLQSLPFALANLNLKAMWLAENQSQPMLKFQTEDDEQTGEKVLTCYLLPQQP
SSSLENLLERSVDETWPTDTNLNRVSVIQFKDDSKHEEEDEETAAERRQGLHRRATPHPS
ELKVMKNVIEAKRNEAYTAKQDEDLESPDSEEKRLSGLSNQSHDSQTSSGTASATSQEEK
RGVNHTGVEINNGHGQEEEVLDEMEVEYTEPTVHFAEKPIIRGGEYENEDDDEDAEMSDE
YSRTPPISAEKQRLIRKDTPHYKKHFKITKLPKPETVAALLQGFSHDGLSPTAHTPEDER
NGEEEEEEEEEEDGVMVNTHFQPRLEAAEPEDSRLSQMNSSLQPVKGVSFDQVNNLLIEP
ARIEEEELTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVKVGDK
LLEVNGVDLHGEEHRTAVEALRNSGAAVVMTVLREHMVEPENAITTTPLRPEDDYFPRER
RSSGLPFLLDPASPAVSAGPALQLTTCLVRNDKGLGFSIAGGKGSTPYRVGDTGIFISRI
AEGGAAHRDNILHVGDRVITINGVDMTEARHDQAVALLTETSPTITLLVERDQASAGGAS
PRTRPHSPPPPEPSDSPEQEEGDEHLGNHLNCPMEDEYPIEEVILIKAGGPLGLSIVGGS
DHSSHPFGVNEPGVFISKVIPNGLASQSGLRVGNRILEVNTIDLRHATHQEAVRALLSNK
QEIRMLVRRDPSPPGMQEIVIHKQPGEKLGISIRGGAKGHAGNPFDPTDEGIFISKVSSS
GAAARDGRLQMGMRILEVGNNSLLGMTHTEAVRVLRAAGDSLVILVCDGFDPRNAAGTEA
SPGVIANPFAAGIVRKNSLESISSVDRDLSLEEIDIMQKQEVEMVRETSQWEQEEMEKVE
HMRLEREDATRLLEEETESLSTGPLKLDYKTLAALPITSLQRVNRSSASEPHRIDSPVRD
AAYSPHNSQSNINFPSNANIKDNSSTKPGAIHPHSRVRPAVSPASQDGHGSPNPFQHGLS
PISSQTTPRAPSPDTHEEYPINIKQVYKAFAAVPHSLAVLEAPQDLYSPRNNFSAKQASP
EPELNNEVFMDEAKGSGPLRPRPSLSSDRHEYSSLAAVPRLSRPSVESKTPSSISRDSPE
QRSFKDRQKYFEIDVKQQTPDKPKPRISLVGEDDLKKMKEEEAKRIERSTREFMMDEDEE
DEEEDLVKQVADMKAQGKVMLDGVEYKVESLGSHSSPSLRPCATPPSHWSSSGPSSADGK
GDSQRNSMEDSFRLEQRPNSMTGLIPVYPGEFVAPIRTAKAERRQQDRLRMQSPELAVAM
DKELSPAEKRALEAEKRAMWRAARPCGLEEDVRQYEQDLAKRLYQSRVRASLGSAAALPN
SCCSSSCQPRMKSLEQDALKAQMVIAKSKEGKKRGTLDQLSESPSPAPTPSPTPMEDISP
RAVTSPGRPSLSEKKFDYRQFAAIPSSKPVYDIQSSGAGDDVHFMDDNPVSVVDPEVSVA
TTSALEEMALYSNKRKLRQGRHSLEAPVPT
NT seq
5673 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtgtatcccgctgtggcggtgtaaccgtcacgttgagtccgtggataagcgg
cactgctcgctcactgcggtgcccgacgagatctaccgctacaaccgcagtctggaggag
ctgctcctggacgccaaccagctgagagagctgcccaagcctttcttcagactgcacaat
ttgcgaaagctgggcctcagtgacaatgagattcaaaagttaccacccgaaattgccaac
ttcacacagctggtggagatggacatctccagaaatgatatttctgagattcccgaaaac
attcaattatgtcaggccttggagatcgcagacttcagcggaaaccccttgtccaggttg
cctgatggcttgacacagctcagaggactggctcatctatcactcaatgacgtgtcgctg
cagtctctacccaatgacattggaaacttgtcaaacctggtgactctagagctgagggag
aatctactgaaatctttgccctcctctctttccttcctggttaaactggaacaactggat
ctgggaagcaatttactggaagttttgcctgacacacttggggcactgcccaatcttcgt
gagctttggttggacaaaaaccagctctccttactacctcctgagctggggaacctgcgg
cagctggtttgcttggacgtgtcggagaaccgtctatcagagcttcccacagagatcagt
ggccttatcaccctcacagacctgctgctctcggagaacatcctggaagtcttgccagac
agcattggctcacttaagaagttgtccattctgaaattgaaccagaaccgcttagtgcat
ctcacagactctcttggagagtgtgagaacctgacagagcttatgctgactgagaacctt
ctccagtccctccctcgctcacttgggaagctgaagaatttgaccaacttgaatgtggac
cgaaaccacttgagcagcgtgccagcagaactgggaggatgtgtcagcctgaacgtgctc
tccctcagagataaccgtttgggaaaactacctactgagctcggcaatgccacagaatta
catgtgctggacgtggcaggcaacaggttgcagagtttaccgttcgcgttggccaatctg
aacctgaaggccatgtggctggcagagaaccagtctcaacccatgctgaagttccagaca
gaggatgatgagcagactggggaaaaagttctcacctgctacctgctgcctcagcaaccc
tcatcgagccttgagaatctactggaaaggagtgttgatgaaacctggcccacagacact
aatttgaacagagtatcggtcattcagttcaaggacgactctaaacacgaagaggaagat
gaggagactgcggcggagaggaggcagggtcttcataggagagccacacctcatcccagt
gagttaaaggtgatgaagaatgtcattgaagccaaaagaaatgaggcttatacagccaaa
caagatgaggatctggagtcaccggactctgaggagaaacggttgagtgggctgtcaaat
caaagtcatgactctcagacctccagcggcaccgcctcggccacttctcaggaagagaag
cggggtgtaaaccatacaggtgtagagattaataatggacatggtcaagaggaggaggtg
ctggatgaaatggaggtggagtatactgagcctactgtgcactttgctgaaaagcccatc
attcgtggtggtgaatatgaaaatgaagacgacgatgaagacgcagaaatgagcgatgag
tactctcgaacgccacctatttctgcagagaaacagcggcttatacgtaaagacacacca
cactacaaaaagcacttcaagatcaccaagctgcccaaacccgagaccgtcgccgccctg
ctgcaaggcttcagtcatgacggcctctcacctactgctcacacccctgaggatgagagg
aacggtgaggaggaggaggaggaagaggaagaggaggatggagtaatggtcaatacccat
tttcagccccgactagaagcagctgagcctgaagacagcaggctgagtcagatgaactca
tccctgcagccagtgaagggggtgtcctttgatcaagtcaataatctgctgattgagcct
gctcgaattgaggaggaagagctgaccctgactatcctgaggcagaccggtgggttaggc
atcagcatagcaggggggaaaggatctacgccctataagggtgatgacgagggtattttc
atctctagagtgtcagaggagggccctgcagcacgggctggggtcaaagtaggagacaaa
cttcttgaggtgaacggagtagacctgcacggagaggaacatcgcacagctgtcgaggcc
ttacgcaactcgggggcagctgtggttatgaccgttctgagggaacacatggttgaaccg
gagaacgccatcaccaccacgccactgagaccagaagatgattatttcccccgggagaga
cggtccagtgggctgcctttcctcctggaccctgcctctcctgctgtcagcgctgggcct
gcgctgcaactaaccacttgtctggtccgcaacgataaaggtttagggttcagcattgct
ggagggaaagggtcaaccccgtaccgagtaggagacacgggaatcttcatctctcgtatt
gctgaaggaggagctgctcacagagacaatatcctgcatgtgggagacagggtcataaca
atcaatggtgtagacatgacagaggccagacatgaccaggcagtagcgctgcttaccgag
acttcccccaccatcaccctcctggtcgaacgggaccaggccagtgcagggggcgcctcc
cctcgaactcgacctcattcgccccctcctccagagccgtctgactcacctgagcaagag
gaaggagatgagcaccttggaaaccatctcaactgccccatggaagacgaataccccatt
gaggaagtgatcctgatcaaagcaggtggtcccttgggtcttagtattgtagggggtagc
gaccattccagccacccttttggagttaatgagccaggggtgttcatctcaaaggtcatt
cccaatggcttggcctctcagagtggacttcgcgtgggcaatcgtatattggaggtgaac
accattgacctaaggcacgccacacatcaggaagctgttagagccctgctatccaacaag
caggagatccgcatgcttgtgcgcagagatccctcgccccctggcatgcaggagattgtc
atccacaagcagcctggagaaaagctgggcattagcatcaggggcggagctaaaggccat
gcaggcaacccctttgaccccacagacgagggcatcttcatttccaaggtgagctccagc
ggtgctgctgcacgagatggccgactgcagatgggcatgcgtattcttgaggtgggcaac
aacagtctgctgggcatgacacacacggaagcagtgagggtcttgcgtgctgccggtgac
tccttggtcattcttgtgtgtgatggctttgacccaagaaacgctgcaggcacagaggca
tcccctggtgttattgcgaacccgtttgcagcagggattgttcgtaagaacagtctggag
agcatctcatcagtcgacagagacctgagtcttgaagagattgacatcatgcagaagcag
gaggtagagatggtgagggagacgtcccagtgggaacaggaagagatggaaaaagtggag
catatgcgcttggagcgcgaggacgcaactcgtttgctggaggaggaaactgagagtttg
agcactggaccactgaaactggactacaagacactggctgctctacctatcactagccta
cagagagttaacagatcttcagcgtctgagcctcacaggattgacagtcctgtccgagat
gctgcatactctccacacaactcacagtcaaacattaatttcccttcaaatgcaaacatc
aaggataattcatcaactaaacctggtgccatccatcctcactctcgggtgcgacccgct
gtatctccagccagtcaggatggccacggcagtcccaaccctttccagcatggcctctct
cccatcagctctcagaccactcctcgtgccccatcccctgacacacatgaggaatacccc
atcaatatcaagcaggtttataaggccttcgccgctgtgccacactccctggctgtactg
gaagccccacaggatctttactctccacggaacaatttcagcgcaaagcaagcatcacca
gagcctgagctgaataatgaggtgtttatggatgaggctaagggcagtggtcctctcagg
cctcgtccctccctctcatctgaccgccacgagtacagcagcctggcagccgtgccacgc
ctgtctcgcccatcagtggagtcgaagaccccctcctctatcagcagagacagcccagag
cagcgctccttcaaagacaggcagaaatattttgagattgatgtgaagcagcagacgcca
gacaaacccaaacctcgcatctcacttgtgggagaagatgacttgaagaaaatgaaagag
gaagaagcaaagcgaattgaacggagtacacgagagtttatgatggatgaagatgaggag
gatgaggaggaagatctggtgaagcaggtggcagatatgaaggctcagggaaaggttatg
ctggatggagtggagtacaaggtggagagtttaggaagccacagttccccatctctgagg
ccgtgtgccacacctcccagccactggagcagctcaggtccctcctctgcggatggtaaa
ggagactctcagcggaattcaatggaagacagtttcagactggaacagagacccaactcc
atgacgggtttgatcccagtttatcccggtgaatttgtggctcccattcggacggccaaa
gcagagcgtaggcaacaagatcgattgcgcatgcagagcccagagcttgcggtggccatg
gacaaggagctgtcgcctgctgaaaaacgagccctggaggcagagaagagggctatgtgg
agagcagccaggccttgtggtctagaggaggacgtaaggcagtatgagcaagacctggct
aagcggctttaccagtcccgtgtgagggcatctctaggcagcgctgcagcccttcccaat
tcctgctgctcctcttcctgtcagcccaggatgaagtctctggagcaggacgctttgaag
gcccagatggtcattgctaagtctaaagaggggaagaagcgtgggacgttggatcagctg
tcagagtccccgtcccctgcgcccacaccctctccaacaccaatggaagatatcagtcca
cgggcagtgacttcaccaggcagaccgtccctgtcagaaaagaagtttgactaccgacaa
tttgctgccattccttcttccaaacccgtttacgacattcagtcttctggtgcaggcgat
gatgtgcacttcatggatgataacccagtgtctgttgtagatccagaagtttctgtggcc
acaacatctgctctagaggagatggctctctacagtaacaagcgcaaactacgacagggc
cgccacagcctggaggctccagtgcccacataa
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