KEGG   Carassius gibelio (silver crucian carp): 128016754
Entry
128016754         CDS       T08819                                 
Name
(RefSeq) poly(U)-binding-splicing factor PUF60-B isoform X1
  KO
K12838  poly(U)-binding-splicing factor PUF60
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    128016754
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cgib03041]
    128016754
Spliceosome [BR:cgib03041]
 Complex A
  U2 snRNP components
   U2 related factors
    128016754
 Complex B
    128016754
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 128016754
NCBI-ProteinID: XP_052457491
LinkDB
Position
A7:complement(20097399..20113948)
AA seq 519 aa
MMENGQGTGAKLVLPPLTPEQQEALQKAKKYAMEQSIKSVLVKQTIAHQQQQLTNLQMAA
VTMGFGDPLSSLQSVAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSW
DSVTMKHKGFAFVEYELPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEA
RAYNRIYVACIHPDLSDDDIKSVFEAFGKIKSCMLAREPTTGKHKGYGFIEYEKPQSSLD
AVSSMNLFDLGGQYLRVGKAVTPPIPLLTPTTPGGLPPAAAVAAAAATARITAQEAVVGA
TVLGSLASPAHILSQQMGLPQAVLAAQAPGIITGVTPARPTLPVVPQVGLVNPVLASPPV
TSASAGTPTSAAQTHSEVKREEDRRRTEDQSAPVGNGQDRELEQLSVSASGGKQTVMQSK
STIMVLRNMVGPEDIDDDLEGEVMEECGKYGAVNRVIIYQERQGEDDDAEIIVKIFVEFS
DADEMNKAIQALNNRWFAGRKVVAEFYDQERFNNSDLSA
NT seq 1560 nt   +upstreamnt  +downstreamnt
atgatggagaatggacaaggcacaggtgccaagcttgtattaccgcctcttactccagag
caacaggaggcgctacaaaaggctaagaagtatgccatggaacagagcatcaagagtgtt
ttagtgaaacagaccatcgcccaccagcagcagcagctcacaaacctgcagatggcagca
gtgacaatgggctttggagatcctctctcatctttacaatcggtggccgcacagaggcag
cgagctctagccatcatgtgccgtgtgtatgtgggctccatttattatgagctgggggaa
gataccatacggcaggccttcgccccctttggtcccattaagagcattgatatgtcttgg
gactctgtcaccatgaaacacaagggctttgcctttgtggagtatgagcttcctgaagca
gctcagctggctttggagcagatgaactctgttatgctgggtggaaggaacattaaggtg
gggcggccaagtaacattggacaggcgcagcctatcatcgaccaactggcagaggaggca
cgtgcctacaaccgaatctatgtagcctgtatccacccagatctatctgatgacgacatt
aagagtgtctttgaggccttcggaaagattaaaagttgtatgctggcacgggaacccacc
acaggaaagcacaagggctatggatttattgaatatgaaaagcctcagtcatcgctggat
gcagtctcatctatgaacctatttgaccttggaggtcagtatttaagagtggggaaggct
gttactcctcccatacctctgttgacacctacaacccctggaggtctgcctcctgccgca
gctgtggctgctgctgctgcgaccgccaggatcactgcccaggaggctgttgttggagca
acagtgctgggttctctcgcttcaccagcacacattctcagtcagcaaatgggacttcca
caggccgtactggctgcccaggcccctggcatcatcacaggtgtgacacctgctcgcccc
actctacctgtagtccctcaggttggtttggtcaacccagtactagcatccccacccgtc
acatctgcgtctgcaggaacaccaacatctgcagcacaaacacattcagaggtcaagaga
gaggaagaccgcaggcggactgaggatcagagtgcaccagtcggaaatggacaggaccgt
gaactggagcagctaagcgtcagtgcaagtggaggaaaacaaacagtcatgcagtcgaag
tcaacaattatggtgctgcgcaatatggtgggcccagaggacattgacgatgacctggaa
ggtgaagtgatggaggaatgtgggaagtatggtgctgttaatcgggttatcatataccag
gaacgacagggtgaggatgacgatgctgagataatagtgaagatctttgtggagttctct
gatgctgatgaaatgaacaaggccatccaagctctcaacaaccgctggtttgcaggtcgc
aaggttgtggccgagttttatgatcaagagcgttttaataacagtgacctctccgcataa

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