Carassius gibelio (silver crucian carp): 128016766
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Entry
128016766 CDS
T08819
Name
(RefSeq) sonic hedgehog protein-like
KO
K11988
sonic hedgehog
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
128016766
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgib01002
]
128016766
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cgib00536
]
128016766
Peptidases and inhibitors [BR:
cgib01002
]
Cysteine peptidases
Family C46: hedgehog family
128016766
Glycosaminoglycan binding proteins [BR:
cgib00536
]
Heparan sulfate / Heparin
Morphogens
128016766
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
DHQS
Vint
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
128016766
NCBI-ProteinID:
XP_052457505
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All DBs
Position
A7:complement(20278832..20286629)
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AA seq
418 aa
AA seq
DB search
MRFKTRVLLVSLLSLSLVVSGLACGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSALVSLRDGGQKAVKDLKPGDKVLAADGEGKLVYSDFIM
FTDRDSATRRLFYVIETKEPVEKITLTAAHLLFVLDNSTDDLHSMTAAFASSVRAGQKVM
VVDDSGQLKSVIVERIYTEEHQGSFAPVTAHGTIVVDRILASCYAVIEDHSLAHLAFGPV
RLYYDASSVLFPQNFISQSNATLQQEGVHWYSKLLYHMGTWLLDSRVLHPLGMSVKSS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcggtttaagacgagagtgctgctggtgtctcttctcagcctgtccttggtggtgtcc
ggactggcctgcggtcccggcagaggctacggcaggagaagacatcccaagaagctgaca
cctctcgcctacaagcagttcatacctaatgtcgcggagaagaccttaggggccagcggc
agatacgagggcaagatcacgcgcaactcggagagatttaaagaacttactccaaattac
aatcccgatattatctttaaggatgaggagaacacgggcgcggacagactcatgacacag
agatgcaaagacaagctgaactccctggccatctctgtaatgaaccagtggccaggggtt
aagctgcgggtgacagagggttgggatgaggacggtcaccattttgaagaatcactccac
tacgagggaagagctgttgatatcaccacctctgatcgagacaagagcaagtatgggaca
ctctctcggttggctgtggaagctggatttgactgggtctattacgagtccaaagcccac
atccattgctctgtcaaagcagaaaattcggttgcggcgaaatctggaggctgtttccca
ggctcggctctggtctcgctcagagacgggggacagaaggccgtgaaggacttgaagcca
ggtgacaaggtgctggcggcggacggcgaagggaagctcgtgtacagcgacttcatcatg
ttcacagaccgagactccgcgacgcgacgcctgttttacgtcatagaaacgaaagaaccc
gtagaaaagatcaccctcaccgctgctcacctcctttttgtcctcgacaactccacggat
gatctgcactccatgaccgccgcgtttgccagcagtgtcagagccggacaaaaggtgatg
gttgttgatgatagcggtcagcttaaatctgtcatcgtggagcggatatacaccgaggag
caccagggctcgttcgcaccagtgactgctcatggaaccattgtggtcgacagaatactg
gcgtcctgttacgccgtaatagaggaccacagtctcgcgcatttggccttcgggccagtc
aggctctattatgacgcgtcatcggtcctattcccccaaaacttcatcagtcagtccaat
gcgactttacaacaggaaggagtccactggtactccaagctcctgtatcacatggggacg
tggcttttggacagccgcgtgcttcatcctttggggatgtcagtaaaatcaagctga
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