Carassius gibelio (silver crucian carp): 128016782
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Entry
128016782 CDS
T08819
Name
(RefSeq) VPS10 domain-containing receptor SorCS2-like isoform X1
KO
K27082
VPS10 domain-containing receptor SorCS2
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
128016782
Membrane trafficking [BR:
cgib04131
]
Protein recycling
Others
Others
128016782
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
SorCS_stalk
PKD
PKD_4
InlK_D3
BNR_6
DUF6786
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
128016782
NCBI-ProteinID:
XP_052457530
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Position
A7:complement(20701455..20867422)
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AA seq
1157 aa
AA seq
DB search
MKALIMAVLAHLYLAVVFACAWMSLFGPISCHTGVINQRDVLDRGLDIRGGHANGRDEAL
ISAHSRGDYSGDPGGPVMGVPRVRRASTPEKVSLLSSSFVLKGDAAHNQAMVHWTGENSS
VILILTKYYHADSNKVLESSLWRSSDYGSTYTKLNLMPGTTIIVTNFYICPTNKKKVILV
SSSINERDQMLFISTDEGSSFQRQPVSFTVDTLLFHPSEEDKLLAYSKEAKLYISTDLGH
KWTLLQERVTKDRVFWAVTGVDVDPDLVHMEIQDISGGYLYVTCLIQNCSDKMVTAQFLG
KIDHNSLSVQDEHIFVKVSTGNRTKYYVSYRRNEFVQMRFPKYALPKDVQIVSTDENQVF
LALQEWYQTDTYNLYQSDPQGVYYSIVLENVRSTNQPEENVLIDILEVRGIKGVFLANQK
VDGKVMTLITYNKGRDWEPLAPPTTDMNGKPVSCKQPDCHLHLHLRWADNPYVSGTVHTK
DSAPGLIMGAGNLGSQLVEYKEEMYITSDCGKTWRQVFEEEHHILYLDHGGVIVAIKDTS
IPLKILKFSIDEGQTWSIHNFTSTSVFVDGLLSEPGDETLVMTVFGHISYRSDWELVKVD
FRKSFPRQCTEADYDSWKLTDLQGEKCIMGQERVYRRRKESSFCIKGKSYTSALTAKPCQ
CTEKDFACDYGFERAPSLRLEGDRCYPDFWHDPDAPPENCHLGHSYKSSTGYRKVIANVC
EGGLNKEQSAKQHSCPLLAPKGLQLAIKGQMLAVAPGDDITFIVHQEQGDTTSTRYQVDL
MDGVRAIYENLTVTDEPIQHRYEKPGVYRVNVKAENSAGHDQATLYIQVTAPLQDVHLEV
VPIAGRHQEVNLTAIVLPTEANLTVFYWWIGDNLQPKLTLENSLIARFSEEGEVPVTVQA
SNGRSMVQDSKTVIVYDQFQVIPLSFSRNLDRFNPNIPEWRQDVGQVVSKIIAKLTGVPQ
DSLVTMVKPGLPTTADLYVLPQESTPVKRSVFVDKRVPSIKQILSENNVSFIVRGGLRVL
VTLADSDRGSRLAAAGPGVWALAVFLLVSLISAAAFILFKFKRKNYKNHGSLLRPEESSL
TRPWLRFRKLPGRNVYAQMHNEKEQEMTSPVNHSEDTQNIIQGEEFIDDDLDSQTLGNHS
GVVLSINSRELHSYLTS
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgctcatcatggcagttttggcgcacctgtacctagctgtggttttcgcttgc
gcgtggatgtcactgttcggaccgatttcatgtcacaccggcgttataaaccagagagac
gtactggaccgagggcttgacatccgcggtgggcatgccaatggcagagatgaagcgctt
atctcagcgcacagccgcggagattacagcggggaccccggcggaccggtcatgggagtt
ccccgagtccggagggcatcgactccggagaaagtctctctactcagcagctctttcgtc
cttaaaggggatgccgcccacaaccaggcaatggtccactggacgggtgaaaatagcagc
gtcatcctcattctcactaaatattaccatgcagactccaacaaagttcttgagagttcc
ctttggagatcaagtgattatgggtcaacctacaccaagctcaacctgatgcctgggaca
accatcatagtcacaaacttctacatctgtcccaccaataagaaaaaggtgatcttggtg
agctccagcatcaatgagcgggaccagatgctcttcatcagcacagatgagggttcatcc
ttccaacggcagcctgtctccttcactgtagataccctcctcttccatccatctgaggaa
gacaaacttctggcttacagcaaggaggcgaagctgtatatctccaccgatctgggtcac
aaatggactctgctacaggagcgtgttactaaagacagagttttctgggccgtgacaggg
gtggatgtggatcctgatctggttcatatggagattcaagacatcagtggtggatacctt
tatgttacatgtctcatacaaaattgctctgataaaatggtgacagcacagttcttgggg
aagattgaccacaattccctctcagtgcaagatgaacacatatttgtgaaggtatctaca
ggaaatcgaaccaagtattatgtctcataccgaagaaatgaatttgttcagatgagattc
cctaaatatgccctaccaaaggatgtgcaaattgtgagtacagacgagaatcaggtattc
ctggctctgcaggaatggtatcagacagacacgtacaacctctaccagtcggatccacaa
ggagtctattactccattgtgttggagaacgtccgcagcaccaatcagcctgaagagaat
gtcctcatcgacattctagaggttcgtggcatcaagggcgtattcttagccaatcaaaag
gtagatggaaaagtaatgactctcatcacctacaacaaaggcagagactgggaaccactg
gctcctcccacaactgatatgaatggcaaacctgtcagttgcaagcagcctgactgtcac
ctccatctccacttgcggtgggctgacaacccgtatgtatctggaacggtccacactaaa
gattctgccccaggcctcataatgggtgcaggtaatcttgggtctcagctggttgaatat
aaagaggagatgtacatcacctcagactgtggcaagacctggagacaggtttttgaagaa
gagcatcacattctttatctggatcatggcggggtcattgtggccattaaggacacctca
atccctttaaaaatactcaaattcagcatagatgaaggacaaacatggagcatccacaac
ttcaccagcacttctgtgtttgtggatggacttctgagtgaacctggagatgagacactg
gttatgacggtatttggccacataagttaccgttcagattgggagctggtgaaggtggat
ttccgaaagtcatttcccagacagtgcacagaagctgattatgactcctggaaactcact
gaccttcagggagagaaatgcatcatgggccaggaacgagtgtacaggaggaggaaagag
tcatcgttctgcattaaagggaagagctatacatcagctttaacagctaaaccttgccag
tgcacagagaaagactttgcctgtgactatggctttgagcgtgctcccagcctcaggtta
gagggggatcgctgttatcctgatttctggcatgatcctgacgctccacctgaaaactgc
catttaggacacagctacaagtccagcacaggttaccggaaggtcatcgctaatgtttgt
gagggtggcttgaataaagaacagagcgcaaagcagcattcttgccctttgctggcccct
aaaggccttcagctggccatcaaaggacagatgctggccgtggcacctggtgatgacatc
accttcatagtccatcaggaacagggtgacaccaccagcaccagatatcaggtcgatcta
atggacggtgtcagggctatatacgaaaacctgacagtcacagatgaacccattcagcac
cgttatgagaagccaggtgtttaccgtgtcaatgtgaaggctgaaaactctgctggacat
gaccaagccacactttacatccaggtcacagctcctcttcaagatgtccatctggaggtg
gtcccaatcgctggcagacatcaagaagtaaatctcacagctatagtgctgcccactgag
gcaaaccttacagtgttttactggtggattggagataaccttcagccaaagctgactctg
gagaatagtctgattgcaaggttctctgaggagggggaagttcctgtgacggttcaggct
tctaatggtcgatccatggtacaggacagcaagactgtcattgtctatgatcaattccag
gtcatcccattgagtttcagtcgtaatttggatcgctttaacccaaacatccctgaatgg
agacaagatgtgggacaagtcgtatccaagattatcgctaagctcaccggggttcctcag
gattctttggttaccatggtgaagcccggtcttcccaccactgcagacctgtatgttctt
cctcaagagagcacaccagtaaagagaagtgtgtttgtggataagcgtgttcccagcata
aagcagattctgagtgagaacaacgtgagcttcattgtgagaggagggttaagagtattg
gtgactctggcagactcagatagaggctctcgtctggctgcagcaggtccaggtgtttgg
gctctagctgtctttctcctcgtcagtctgatctctgccgcagcattcatactcttcaaa
tttaaaaggaaaaactacaaaaaccatggttccttgctgaggccagaggagagcagccta
acgcgtccctggctgcgtttcagaaaactgccaggacgaaacgtctatgcccagatgcac
aatgagaaggagcaggaaatgaccagccctgtcaatcacagtgaggacacacagaatatc
attcaaggcgaggagttcatcgatgatgaccttgactcacagacactaggcaaccactca
ggagtggtgttgagcataaattcaagggagctgcacagttacctgaccagctga
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