Carassius gibelio (silver crucian carp): 128016887
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Entry
128016887 CDS
T08819
Name
(RefSeq) DNA-binding protein RFX7-like isoform X1
KO
K09175
DNA-binding protein RFX7
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
128016887
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Other basic domains
RF-X
128016887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX5_N
RFX_DNA_binding
Pox_D5
Motif
Other DBs
NCBI-GeneID:
128016887
NCBI-ProteinID:
XP_052457719
LinkDB
All DBs
Position
A7:complement(23940254..23967440)
Genome browser
AA seq
1506 aa
AA seq
DB search
MAEDQQQSGPGLGPLTLPSAVQGLHGTETNALQLKIKSSICKTVQSKVDCILQDVEKLTD
IEKLYLYLKLPSGPSSGSEKNEQSSMSSSRTQQLHAFSWIRNHLEEHPETSLPKQEVYDE
YKSYCDSLVYHALSAADFGKIMKNVFPCMKARRLGMRGKSKYCYSGLRKKAFVHMPSLPN
LDLHKSGDGCEVFESTGQLSSAEDEVRMAACGLVCEWAQKVLSRQFDSVEDLARYLLNSH
YIGTKSVAALTVMTGSPSGAKISIQSSAFAPTADAHSFQPQVKTLVSPSVDAKQQLQRKI
QKKQQEQKLHSPLPGEAQARRADGGITPGAGTGIPCGSPALLSPQPIGIVVAAVSSPITV
QRSRQLMSPSPVPMAAADSKVLPVNFQVVTQSVQPVKQCPKTPRNISASPISDRSARHRY
AQILPKPSASSGITLRSPTLLITNSPIKTVMSTPHVSSVNVVKMTTISLGSNGSGTSTPA
DNPASNKVRPASAGIANLNNDPQPVTRVRSGSIAAMPSVLERSGCSTITTPVIDNKTNTE
DIIGSSQELGGMSRLATCPDAVGGGVQWSGKLKPRAASVPNPLDKGSLGLDTLTGSQYNE
RTLLSVKTLAAGSNKTSNTNESILYQNTSSSQSTIGIAVVTASKDAVLASKSPHKRPGLS
TDLSPTPVKKAHISVLPAGGSDGLKSNIMAKQIPRSSTPISPESAPLTAIGKATTGPVRN
TGFQTVRRPQSIAQGRWEGASSITDYRVPVYSTASQDTSVGNIMFQTGCRPRSISQGRWE
GSSIDIEGRAVVTRTVSAPGQALLQVTKNSQDLLVDQSDSSAVCELKSGFWNRELQDDTQ
QHQEMYGPQMVSEPKLSTSVMETLPVNQASPSDQQVQMSDYGTQANLGYFPFNDDDMTQD
SIVEELVQMEEQMKIKNSMQSFSNCVDNSLQGQQQTMQTTTMSTLQSNTMYYSSAHSCST
PIQTPTPTPTPTSEMIGSGQGLKHESPCSRLVPTTPVDSALGSSRQTPIGTPHSNCSSSV
PPSPVECRNPFAFTPINSTITGYHDGSIVSSSPVKPMQRPMATHPDKTKLEWMNGGYNNS
GGNSNNGISILPSYQDLVDDHFRKPHAFAIPGLTCQSQTRHHDSHISRLITISPVQQQVA
SMASLNKKEGFAVPAPLDNKVSTSSSGSGTFRCRSVSPAVRQRNLSGTQAPNVPHSVISP
FNSPITTEMLNIFSNSDPDANISSMAQRSQSVPVTVMMQSEVLPMQAGQQMNAKNITNVL
INKMDGDGDDSVRGLGINNMPSNYTARMNLTQILETTTVPSFPGSASHQALISPCSSAFE
SQKPGYLMRNAREEPMSFSVHESQAQSASEEHQLPQQLQQHLGRRQLPGQEPQSQDMLLP
LQQNLRQHQHQQPLDLDRTIKDLLHEESLNAGSHLVGQGSELRAGSSEFPSDMRLTSELT
GSINDLNTLDTNLLFDPSQQQGQYEDSTLEELKNDPLFQQICSETANSAGFDWLESKDQA
TVEMLG
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagaccagcagcagtctggccccggtttaggacctttaacgttaccttccgcg
gttcaaggattgcatgggactgagaccaatgcgttgcagctaaaaataaagagctcgatc
tgcaaaaccgtacaatcaaaggtggattgcattttgcaagatgtggagaaacttacagac
attgaaaaactctacctctatctcaagttgccttctggacccagcagtggcagtgagaaa
aatgagcagagctccatgtcatcaagtcgtacccagcagttgcatgctttcagctggatt
cgtaaccaccttgaggagcaccccgaaacatcgctgcctaaacaagaagtctacgatgag
tacaagagttactgtgatagtctggtgtatcacgctctcagtgctgcagactttggaaag
atcatgaagaacgtctttccttgtatgaaggcgcgtcgacttggcatgcgaggcaaatcc
aagtattgttatagtggacttagaaagaaggcttttgttcacatgccatctcttccaaac
ctagatcttcacaaatcaggtgatgggtgtgaagtgtttgaatctactggtcaactgtcc
agtgcagaagatgaggtgcgcatggctgcatgtggtctggtgtgtgagtgggcacagaaa
gtgctgagtcggcagtttgacagtgttgaggatctggctcggtatcttttgaacagccac
tacattggaactaagtctgtggctgctctgactgtgatgaccggttccccatcaggagca
aagatttccattcagtcatctgcatttgctcccacagccgatgcacactcattccaacct
caggttaaaaccctggtctcaccctcggtagatgccaaacagcagctgcaaaggaagatc
cagaagaagcagcaagaacaaaaactgcattctccactccctggtgaagctcaggccagg
agggcagatgggggcataactcctggggcagggacaggcataccctgtggaagtcctgct
cttctctcgccacaacctattggtattgtggttgcagctgtttccagccccatcacggtt
cagaggagcagacagttgatgtctcctagccctgttcccatggcagctgcagacagcaaa
gttcttcctgtaaactttcaagtggttactcagtcagtgcagcctgtgaagcagtgcccc
aagacacctcgtaacatctcggccagtccgatcagtgaccggtcagcccgtcaccggtat
gcccaaatcctgcccaaaccatctgcctcaagtggcatcaccctgcgctcaccgacactg
ctcatcactaacagccccattaagactgtaatgtcaactccacatgtcagttcggtcaat
gtagtcaagatgacaaccatatctctgggctctaatggcagtgggaccagcacaccagcc
gataaccctgccagcaacaaagtcagacctgcatctgctggaattgccaacctcaacaac
gatccacagccagtcacacgtgttcgcagtgggtctatagctgcaatgccatctgttttg
gaaagatcggggtgctcaacaatcacaacgccagtcattgacaataaaacaaatactgaa
gacataattggaagtagtcaagagcttggtggtatgagtagactggcaacctgtccggac
gccgttggtggtggtgtacaatggtcaggaaagctcaaacccagagcagctagcgtaccc
aatcctcttgacaagggctccctgggattggacactctaacagggtcccaatacaatgag
cggacactacttagtgtcaaaactctggctgctggcagcaataaaacgtccaacactaat
gaaagcattttgtatcaaaacacaagtagctctcagtcaaccattggtattgcagttgtg
acagcttccaaagatgcagtgttggcatccaagagccctcacaaaagacctggcttatcc
accgatttgagcccaacacctgttaaaaaagcccacatttctgtgctaccagccggtgga
tccgacggactaaagtcaaacataatggcgaagcaaattccaagatcaagtactccaata
agtccagaaagtgcacctctcacagccataggcaaagctactacaggtccggtcaggaat
actggcttccagacagttcgcagaccacaaagcatcgcccagggaagatgggaaggagct
tcatcaataacagattatagagttcctgtctactctacagcaagtcaggatacttcagtg
ggaaatatcatgtttcagactggttgcagacctcgaagcatctcccaagggagatgggaa
ggatcttcaatagatatcgaaggtagagctgtggtcactcgtactgttagtgctccaggt
caagcattgctacaagtaacaaaaaactcacaggatttgcttgtagaccagtctgactct
tctgcagtatgtgaactaaagagtggattttggaatagggagctgcaagatgacactcaa
caacatcaggaaatgtatggcccgcaaatggtgtctgagccaaagctgtccacctcagtg
atggagactcttcctgtaaatcaagcctctccttccgaccagcaggttcaaatgagtgac
tatggaacccaggccaaccttggctactttccctttaatgatgatgacatgacccaggat
agcattgttgaggaacttgtacaaatggaagagcagatgaaaattaaaaatagcatgcaa
agtttcagcaactgtgtggataattcactacaaggccagcaacaaaccatgcagactacc
acaatgtctaccctccagtccaacaccatgtactacagctctgctcatagctgtagcacc
ccaatccaaacacccaccccaactcctactcccacttcagagatgataggaagtggccag
ggtttgaagcatgaaagcccctgttcgcgcttggtccctaccactccagtcgacagtgct
cttggaagtagtcgtcaaactcctattggaactccacactccaactgcagcagtagtgtc
ccaccaagcccggtggaatgcaggaacccttttgcctttactcctattaactccaccatt
actggttaccatgatggaagtattgtctcttcaagccccgtcaaacccatgcaaagacca
atggccacacatccagataagactaaactagaatggatgaatggtgggtacaataacagt
ggtgggaactccaacaatggcattagcattcttccgagctaccaagacctagtagatgac
cactttcgaaagcctcatgccttcgccatcccaggcctgacctgtcagtcacaaaccaga
catcatgactcccatattagccgcttgataaccatttcgcctgtccagcagcaagtggca
agcatggctagcctcaacaagaaagagggttttgctgtcccagcaccccttgacaacaag
gtcagcacttcttcttcagggtctggaacatttaggtgccgcagcgttagcccagcagtc
aggcagcgcaatttgagtggtacccaagctcccaatgttccccactctgtgatctctcct
ttcaactcgcccataacaactgaaatgctaaacatcttttctaacagtgaccctgatgca
aacatcagcagcatggcacagaggagtcagtctgttcctgtgactgtgatgatgcagtct
gaggttctacccatgcaagcaggccagcagatgaatgccaaaaatatcaccaatgtcttg
atcaacaaaatggatggcgatggagatgactctgtacgtggcctcggaatcaacaacatg
ccgtccaactacactgcccgcatgaatctcacccagattctggagaccaccacagtgccc
agcttccctggtagtgccagccaccaagctctgatctcgccttgttcatcagcctttgag
tcccagaagcctggttacctcatgagaaatgccagggaggagccgatgagcttctctgta
catgaaagccaagcacaatcagcctcagaggagcaccaactgccacaacagctgcagcag
cacttaggtagacggcagcttcctgggcaggaaccgcagagtcaggacatgctgttgcct
ctacagcaaaacctccgacaacatcagcaccagcaacccttggatttagaccgaactatt
aaagatcttttacatgaggaaagcttgaatgctggctcacatcttgtgggtcaaggatca
gagctccgtgctgggagttcagagtttcccagtgatatgcgactaacctctgagctcact
ggtagcataaatgacttaaatacattggacaccaaccttctttttgaccccagtcaacag
caaggacaatatgaagactcgacactggaagaactgaagaatgacccactttttcaacag
atatgcagcgagactgcaaattctgctggctttgactggctggaaagcaaagaccaggca
acagtggaaatgttgggttaa
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