Carassius gibelio (silver crucian carp): 128016992
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Entry
128016992 CDS
T08819
Name
(RefSeq) nuclear receptor ROR-alpha B-like isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
128016992
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cgib03310
]
128016992
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
128016992
Nuclear receptors [BR:
cgib03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
128016992
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF1389
Motif
Other DBs
NCBI-GeneID:
128016992
NCBI-ProteinID:
XP_052457984
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Position
A7:26692990..26723008
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AA seq
528 aa
AA seq
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MNMESPPESVASPRKSASEADASVEDSPVKLDSKAETDKPAPVRRQSCSSTNKDVSSAKK
THTSQIESIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQGTVSYSCPRQKSCLIDRTSR
NRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLFAEVQKHRQQQQEEKAGDETEKGREP
QPPGEAEPLTPSYALSTNGVTELPNDLSGYMNGQTPEERKADSAIGGFYLDIQPSPDQSG
LDMDGIKLEPVCDLSPDSGLDQYCCYSSRESSPPDNDLEHLSENICKSHMETCQYLREEL
QPSNWQTVLQTDLDAYQKKSQEDMWQLCAVKVTEAVQYVVEFAKRIDGFMELCQNDQIVL
LKAGSLEVVFVRMCRAYNSQNNTVFFDSRYAGPEVFKALGCDELISSVFEFAKSLTSLQL
SEDEIGLFSAYVLMSADRSWLQEKTRVEKLQQKIKTALQNLFQNNQRDEGILAKLICTVS
TVRMLCRHHMEKLNTFRALYPETVRTRFPPLYKELFGSEFEQVLPQEA
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgaacatggagtctccgccagagtccgtcgcgtcgccgcgcaagagcgcttctgaagcg
gacgcttcggtggaggacagcccggtgaaactggacagcaaagctgaaaccgacaaacca
gcaccagttcggcgacagagttgctcaagtaccaacaaggatgtgtcctcagccaagaaa
acacacacatctcagattgagagtattccctgtaaaatctgcggagataaatcatcaggg
attcactatggtgttatcacctgtgagggatgcaagggtttcttcaggaggagtcagcag
ggcactgtgtcatattcatgtcctcggcagaagagctgtctgatcgaccgtaccagcaga
aaccgctgccagcactgtcgcctgcagaaatgcttggcagtgggcatgtcaagagatgct
gtgaagttcggccggatgtctaagaagcagagggacagtctgttcgcagaggttcagaaa
caccgtcaacagcagcaggaggagaaggcgggtgatgagacggagaaggggcgggaacct
caacctcctggagaggcggagccactcacgccctcttacgccctgtccaccaatggcgtc
acagaactccccaatgacctcagtggatacatgaacggtcaaaccccagaggagagaaag
gcggattcagcgattggtggattttacctggacattcagccctctccagaccagtcaggt
ctagacatggacggcatcaaactagaaccagtgtgcgacctcagcccagactcgggctta
gatcagtattgttgctatagcagcagagaatcttctcctcctgacaatgacctagaacat
ctgtcagagaacatctgcaagtctcacatggagacgtgccagtatcttcgggaagagcta
cagcccagcaactggcagacagttttacagaccgacctggacgcgtaccaaaagaagtct
caggaggacatgtggcagctgtgtgcggttaaagtcactgaagctgtgcagtatgtggtt
gagtttgccaagcgcattgatggattcatggagctgtgtcagaacgatcagatcgtgctg
ctcaaagcaggttctttagaagttgtgttcgtgaggatgtgtcgggcgtataactcccag
aacaacactgtcttttttgacagcagatatgccgggcctgaagtcttcaaagcattgggc
tgtgatgaacttatcagctcagtgtttgagtttgcgaagagcctgacctctctacagctc
agtgaagatgagattggcctgttttcagcatacgtgctgatgtctgcagatcgttcctgg
ctgcaggagaagaccagagtggagaaactccagcagaagatcaagactgccctccagaac
ctctttcagaacaaccagagagatgagggaattctcgcaaagcttatctgtacagtgtcc
accgttcggatgttatgccgtcaccatatggagaaactgaacacattcagagctctttac
ccagagacggtccgcacacgcttccctccgctctataaggagctgtttggctccgaattt
gagcaggttctgcctcaggaggcctga
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