Carassius gibelio (silver crucian carp): 128017059
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Entry
128017059 CDS
T08819
Name
(RefSeq) transcription factor Sox-19b-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
128017059
Transcription factors [BR:
cgib03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128017059
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
128017059
NCBI-ProteinID:
XP_052458110
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Position
A7:28379505..28382873
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AA seq
289 aa
AA seq
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MYSMMEYEMKTTGQPHPHHNSPGMSPPVSGVGNAHHGSKTSCPPGGDPMDKVKRPMNAFM
VWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDTEKRPFIDEAKRLRAVHMKDYPDYK
YKPRRKTKALLRKDNPVGKYPLGAGSLLASAVAQGQGGSPRMDGYGWGHTGAYMGMQGEA
LGYPQQLHRYELSALQYPPAQTYMNGASSYSQMSYSGSPQQPSPVMSMVKPEPLSHSPSG
HHRGAFQGDLRDMISMYIPGGDASDGSNQRTYPGVQQHYLGGTVPLTHI
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatggagtatgaaatgaagaccacgggtcaacctcatccccaccacaac
agtccagggatgtctcctccggtcagcggggttggaaacgcgcaccacggatctaaaacc
tcttgtccacccggaggggaccccatggacaaagtgaagcgccccatgaatgcgtttatg
gtgtggtcccggggtcagcggaggaagatggcacaggagaaccccaaaatgcacaactcg
gagataagcaaacgcctcggggcggaatggaaacttttaacggacacggagaagcggccg
ttcatcgatgaggccaaacggttgcgggccgtacacatgaaggactaccccgactacaaa
tacaaacctcggcgtaagaccaaagctctcctcaggaaggacaaccccgtcggtaaatat
cctctcggagccggcagcctgctggcatcagccgtggcacagggacaaggcgggagcccg
agaatggacggctatggctggggtcacaccggcgcttatatgggaatgcagggtgaagcg
ctcggatacccgcaacaactgcaccggtacgagctgtcagctctccagtacccgccggca
cagacctacatgaacggagccagctcttacagccaaatgtcatatagcggcagccctcag
cagcccagtccggtgatgtctatggttaaaccagaaccactatcccattcgccctctggc
caccaccgtggggctttccaaggggacctgagggacatgattagcatgtacattccaggt
ggtgatgccagtgatggctcaaaccagagaacctaccctggtgtccaacagcactatctt
ggtggaactgttcccctcactcatatctga
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