KEGG   Carassius gibelio (silver crucian carp): 128017264
Entry
128017264         CDS       T08819                                 
Name
(RefSeq) focadhesin
  KO
K27498  focadhesin
Organism
cgib  Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgib03019]
    128017264
Messenger RNA biogenesis [BR:cgib03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     128017264
SSDB
Motif
Pfam: Focadhesin DUF3730 HEAT
Other DBs
NCBI-GeneID: 128017264
NCBI-ProteinID: XP_052458522
LinkDB
Position
A7:complement(32151266..32192626)
AA seq 1807 aa
MTEILKSRFEFPSSLIQAQAVRTLVTAVLKEKGQNERICQTTAKGQSLESLWEQCSSDST
VVRSACCDALVLLVEQGHADLPYVLNTTLNLLPSARNVQGLIKVVGRLLQIQASQRDNGA
SFTCPYSIRTFPHPYITVLENRPDCWPALLQEIDDFLQLAMDKDEPVYVKMLVPFLRYLY
CEPQRLSENALLRHSLLRVLLQPRGVPEPDSLQEKGASGTRVVCELIHSLFDLLPYMLVD
SVTAVVEFSSFAESLTSALLIDPGFWRKELTQLTLQLLCACQLSLHLGGELMSLLHTLHQ
IIPAHAEELPPEQVIMGISLLLLSASTSQQTALLELAVKIVPPELPPPWGASLLVMPLLQ
VLSCSSLMEALTDTQTHTKNLELTNSLLQRVQRETSDRKEDSTQLSLPLSTWYSELQVAT
SVLHRISVDSIASMEWLYSLQSSLSVCEHVPDSVCLLVSHVIVSSHGDLCRLALDTAAAI
AEADPAKVPCFLPVLMFKLGRVSDPALSHSVLYTLPKLGTHKFCIPQVLHVLQTLGSSSR
LRPVALRLLALLWKKQDRVYPDLQRLMSQLEKSSVVLGKDTQWEQILARAACIRDICRER
PYQHGGDMLAAISDTLMQFSRKDQATPATLALQGLQELCRAEVVDIISTWKALSPKLCCD
TRPLVLKATAELLALVPTLNVKTEEYEKFRNEAVCVLWGYALSQDPEVASPGFKALSEYP
EPSHTILHLPEQIRPVPKQPEEEDEGKENENEKEEDVSVPGTSYVKLVRLTPRSVLPALE
TFLTALVRQEMNQMPRGVYHSALIGVNLRSDQGKTVSGIPSFMLKTYEKNKQPGLKPGLA
AGLLLCYDLPVQTDKDGHPITRFLVSRGRSYQQMLATLIHEVNIQPSEWHRSLLLPQAWR
GFMSRAYHAALKGRKAELEMLQKQGKESPEELQYKQHYAWLWVRDQLTDVVKSAAKDSPV
VQGNSILALSGLAVVLTRYESNLPTQSESGLEVGPDFLPTVHWLTMVIDTLLSIVSSNSN
PKAQVFPWFIHRSYSGENTASVIARSCAALGLALLVPVLVTSCKKNIPAILGTLEAGLPG
SPSADESQALQFHSGLALGMFLAWLHDERVSDISGQSVAELLVKHLERLEDCCFNTNLEY
NAGCVLGVGLVLSSLSSSSQSERDGVHVSLTLDRLLQSLQDSSNMSRMQQEVLAYSVACV
AVSAFSAGIIEASKAEESMNTLRTLTEESQQTPGFALALGLTVFGLSSFGHGKAVDIQPR
LLAAWTKILLAEGCPTMQRLSALNGLIALVGSEMALIQMKSESEESSQQQSRLNEVIRAI
TQIITFSGTIGLQSNGACLLGHLHLAHMSSSHSRTAVPQDFGYLPEKSVIRASVDFITEA
GRKGPEFTPPHLVKTVLAALVTVGGSFQYPPVNWSAILSPLMRLGFGEEVQHHCLALAAS
QAQSSQSAALFLGIWLVPPLVHSLSMHSRASLYECLNSWMKHVAEDKLQVYVDSLAVQQF
VPDTRPHRLPLCLSILRGLSKAMAVPNPPQNCWTALCSTTEKIYNLLPDNIPAGEVHLYE
AMCSCLSELSDTEIDRILKVTEANVEKTAFILCYLTSKGRVPLLGLNDVISTILQVGNKK
RISWLLLQALHQSRFASSPSTGVSKRMEWLLELMGHIRNVAYGSPSVKCVSVIEGTDFLL
GVFAAAVVSWADHCAPLLIGIRAQWFPWEQSSLTTDLSHDLCVNPAITELSVASCLLAIP
CSMKKLLCKEPWKSQSQKFIDWLFSITEGPKLGFSETALLTAKATLMALRSSSEFKKKGV
WTRAYGW
NT seq 5424 nt   +upstreamnt  +downstreamnt
atgactgaaattttgaagagcaggtttgagttccccagctccctcattcaagcccaggct
gtgaggacgctggtcactgcggtgctgaaagagaaaggccagaatgaaaggatttgtcag
acaaccgctaaaggtcaatcgctggagtctctttgggagcagtgcagcagtgacagtact
gtcgtccgctcggcctgctgtgacgctctggtgctgcttgtagaacagggacatgcagat
ctgccatatgtgctcaacaccacccttaacctcctgccctcggcacggaatgttcaaggg
ctgatcaaagtggttgggaggctgctacagatccaggcaagtcagcgggataacggagca
agcttcacctgtccatactcaattaggaccttccctcacccctacattacagtgctggaa
aaccgccctgactgctggcctgctctgctccaggaaattgatgacttccttcagctggct
atggacaaagatgagccagtatatgtgaaaatgctggtcccgttccttcgttacctgtac
tgcgagccccagaggttgtcagaaaacgctctgcttcgacacagcctcctcagggtcctg
ctccaacctcgaggggttcctgagcctgacagcctgcaggaaaagggggcgtctggcact
cgggtggtctgtgagctaatacacagtctctttgacctgcttccatacatgctggtggac
agtgtaaccgcagtggttgagttcagctcatttgctgaatctctgacatcggctctgctc
atcgatccaggcttctggaggaaggaactgactcagctgacacttcagcttctgtgtgcc
tgtcagctgagtcttcatctgggaggagaactgatgtctctccttcacacactccaccag
ataatacctgcacatgcagaggaactcccgcctgagcaagtgatcatgggaatctccctg
ctactgctaagtgcctccacctctcaacaaactgccctcctagagctcgctgtaaagatt
gtccctcctgagcttccacctccttggggtgcatctttgctggtgatgcccttgttacag
gtgctgtcctgctccagcctcatggaagccctgacagacacacagacacacacaaagaac
cttgaactgaccaattcactgttgcaaagggttcaaagagagacctcagatcgaaaagag
gactccacacagctgagtttgcctctcagcacttggtacagtgagcttcaagtggccacc
agcgtcctgcaccgaatttccgtagactccattgcatccatggaatggctttactccctg
cagtcatcactctctgtctgtgaacacgtcccagatagtgtttgtctcctggtgtcccat
gttatcgtcagcagtcatggggatctctgcaggttagcgctggacactgctgctgccatc
gccgaggccgaccctgctaaggtgccatgtttcctccccgtcctgatgtttaaactgggc
agagtctctgatccggctttgtctcactctgttctctacactctgccaaaactgggaacc
cacaagttctgtatcccgcaggtgcttcatgtcctccaaactctgggcagttcatccaga
ctaaggcctgtggcgctgcgcctcttagctcttttatggaaaaaacaggaccgtgtgtat
ccggacctgcagagactgatgtcacagcttgaaaaatcatcagtggtcttgggaaaagat
acgcagtgggagcagatattggctagagcagcctgcatcagagacatctgcagagagagg
ccgtaccaacatggaggagacatgctggctgccatcagcgacacactgatgcagttctcc
aggaaggaccaggccacccctgctactctggcactgcagggcttacaggagctctgtaga
gctgaggtagtggatatcatctccacgtggaaggccctctctcctaagctgtgctgtgac
accagacccctggtcctaaaggccacagctgaacttctggcattagtacctactttaaac
gtcaaaactgaagaatatgagaagttcagaaacgaggcagtctgtgttttatggggctac
gcacttagtcaggacccagaggttgcaagcccgggatttaaagctctctcggagtaccct
gaaccgtctcacaccatcctacacttgccagagcagatcagacctgtaccaaagcagcct
gaagaagaggatgaagggaaggagaatgagaacgagaaggaggaagatgtttcagtgcca
gggacgtcatacgtgaagctagttcgtctcacaccacgatctgttttaccagcccttgag
accttcctaacggctctagtacggcaggagatgaaccaaatgccccgtggcgtgtaccat
tcagctctgattggggtgaatttgcgctctgaccagggaaaaactgtatctggaattcct
tcttttatgctgaaaacatatgagaagaacaagcagcccggtctgaaacctggcttagca
gctgggcttctactctgttatgaccttcctgttcaaactgacaaagatggacatccaatc
acgcgatttcttgtcagcagagggcggagttatcaacaaatgttagccacccttattcat
gaggtgaacatccagccgtctgaatggcatcgttctctgctcttgccccaggcctggcgg
ggcttcatgagccgggcttaccatgcagctctcaagggtcgaaaggcagagctggagatg
cttcagaagcagggtaaagagagcccagaggaactgcagtacaaacagcactatgcctgg
ctctgggtcagagaccaactgactgatgtggtcaaatctgctgccaaagatagtccagtt
gttcaaggtaattctatcctggcactaagtggcctggctgttgttttaaccagatatgag
agcaacctccctacacagtctgaaagtggacttgaggtgggtccggacttccttcccaca
gttcactggctgacgatggtgattgacacactgctcagcattgttagcagtaacagtaac
cctaaagcacaagtcttcccatggttcattcatcgctcatactcgggtgagaacacagcg
agtgtgatcgcacgctcctgtgctgctctggggctggcgttgttggtgccggtgctggta
acctcgtgcaaaaagaacattcctgctatactgggcaccctagaggcgggactgccaggc
tcgccctccgcagacgagtctcaggcactccagtttcacagcggcctggctctgggcatg
tttctagcctggctgcatgacgagagagtcagtgatatatctgggcagtcggtagcagag
ctgctagtgaaacatctggaacgactggaagactgttgctttaatacaaatctggagtac
aatgctggttgtgtgttaggtgtggggttggtactcagttctctcagtagcagtagtcag
tctgagcgggacggtgtgcatgtgtctctaacgctggacagactcctgcagagcctgcag
gacagcagcaatatgagccgcatgcagcaggaggttttggcctattctgtggcgtgtgtt
gcagtttcagcatttagtgcaggcattattgaggccagcaaggctgaggaaagcatgaac
acactgcgcactctgacagaggaaagccaacagacaccaggctttgctttggcattgggt
ctcacagtgtttggactctcttcttttggtcatggtaaagcggtagacatccagcctcgt
ctgctggctgcctggaccaagatactgctggcagagggttgtcccacaatgcagaggctg
tctgccctcaatggactgatcgcattagtgggatcagagatggctctcattcagatgaag
agtgaatctgaggagtcctcacagcagcagagcagactgaacgaggtcatccgagccatt
acacagatcatcactttttcaggaacaataggtctgcagtctaacggagcatgtctgctt
ggacacctgcatctggcccacatgtccagcagccacagtcgaaccgcagttcctcaggac
tttggttatctcccagagaaaagtgtcatccgagcttcagtagacttcatcaccgaagcg
ggaagaaaaggacctgagttcactcctccacacctggtgaagacggtgctggcagcgtta
gtgacggtcggtggaagcttccagtatcctccagtcaactggagcgccatcctctctccg
ctgatgagactcggctttggagaggaagtgcagcatcactgtttagcgttagctgccagt
caggcccagtcttcccagagtgccgcacttttcctcggcatctggcttgtgcctcccctg
gttcacagcctgagtatgcactccagggcttctctgtacgagtgcctgaactcctggatg
aagcacgtggctgaagacaaactccaggtgtacgtggacagtctggcagtccagcagttt
gtacccgacacacgtcctcatcgcctgcccctgtgcctgtccatcctgcgtgggctgtcc
aaagccatggcggtccccaacccgccccaaaactgctggactgccctgtgctccaccact
gaaaagatctacaacctcttacctgataatatccctgctggtgaggtgcacctgtatgaa
gccatgtgttcgtgtctgtctgaactgagcgacactgagattgaccgcatacttaaagtc
actgaggctaatgtggaaaaaacagctttcatcctctgctacctgacctctaaaggcaga
gtccctctgctcggactcaatgatgtcatcagtaccatcctccaggtggggaataagaaa
cgaatcagctggcttctcctgcaggccctccaccaatcacgcttcgcctctagtcccagt
acaggggtctctaaacgaatggagtggcttttggagttaatggggcacatcagaaatgtt
gcatacggatctccttctgttaaatgtgtcagtgttatagagggaacagacttcctcctc
ggtgtgtttgctgcagcagtggtgtcttgggctgatcattgtgctccgcttctcattgga
atcagggcccagtggtttccctgggaacagtcctctctgacaacagacctgtcccatgac
ctctgtgtcaaccctgctatcacagagctgtcggtcgcgtcatgccttcttgcaatccca
tgcagcatgaaaaaactactctgcaaagagccgtggaaatcccagtcacagaagttcatc
gactggctcttcagtattacagaaggtcctaaactaggtttctctgagactgccttactt
acagccaaagcgactctaatggctctgagatccagctctgagttcaagaagaagggtgtg
tggaccagggcgtatggttggtga

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