Carassius gibelio (silver crucian carp): 128017280
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Entry
128017280 CDS
T08819
Name
(RefSeq) ras-related protein Rab-1B
KO
K07874
Ras-related protein Rab-1A
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128017280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
128017280
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgib04147
]
128017280
04031 GTP-binding proteins [BR:
cgib04031
]
128017280
Membrane trafficking [BR:
cgib04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab GTPases
128017280
Autophagy
Other autophagy associated proteins
128017280
Exosome [BR:
cgib04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128017280
Exosomal proteins of other body fluids (saliva and urine)
128017280
Exosomal proteins of colorectal cancer cells
128017280
GTP-binding proteins [BR:
cgib04031
]
Small (monomeric) G-proteins
Rab Family
Rab1/35 [OT]
128017280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
RsgA_GTPase
Gtr1_RagA
SRPRB
AAA
FeoB_N
AAA_7
ABC_tran
AAA_16
PduV-EutP
Septin
AAA_29
AAA_22
LANC_like
AAA_5
CRAL_TRIO_2
Motif
Other DBs
NCBI-GeneID:
128017280
NCBI-ProteinID:
XP_052458544
LinkDB
All DBs
Position
A7:complement(32480040..32488776)
Genome browser
AA seq
201 aa
AA seq
DB search
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLQEIDRYASENVNKLLVG
NKCDLTTKKVVDYTTAKEFADSLAIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATTG
GDKPNLKIESTPVRQSGGGCC
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagaatatgactaccttttcaaactgctcctcatcggtgactctggagtcggg
aagtcgtgtctgctgttgagatttgctgatgacacatacactgagagctacatcagcacc
ataggcgtggacttcaagatccgcaccattgaacttgatggcaaaaccattaagctacag
atttgggacactgcggggcaagaaaggtttcgaaccatcacctcgagttactatcgaggg
gctcacggtatcattgtggtctatgatgtcacagatcaggaatcatataacaatgtgaaa
cagtggctacaggagatagaccgctatgcaagcgagaacgtcaacaagctgctagtgggg
aacaaatgtgacctcaccaccaagaaagtagtggactacacaacagccaaggaatttgct
gactctttagcaatccccttccttgagacgagtgctaagaatgccacgaatgtggagcag
gccttcatgacaatggctgctgagatcaagaagcgcatggggcctggagcgacaaccgga
ggagacaagcccaacctgaagatcgagagcactcctgtgcggcagtctggcggcggctgc
tgttga
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integrated database retrieval system