Carassius gibelio (silver crucian carp): 128017361
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Entry
128017361 CDS
T08819
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
128017361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgib03009
]
128017361
Ribosome biogenesis [BR:
cgib03009
]
Eukaryotic type
Pre-60S particles
GTPases
128017361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
MMR_HSR1
EFG_IV
Motif
Other DBs
NCBI-GeneID:
128017361
NCBI-ProteinID:
XP_052458682
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All DBs
Position
A7:34857587..34939992
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AA seq
1121 aa
AA seq
DB search
MRDASLEKIIALQKKTSHIRNLCILAHVDHGKTTLADSLVASNGIISSRLAGKLRYLDSR
EDEQIRGITMKSSGISLHYTTGGNEYLINLIDSPGHVDFSSEVSTAVRLCDGAIIVVDAV
EGVCPQTQVVLRQAWLENIRPVLVINKMDRLIVELKLTSQEAFTHLQKLLEQVNAVTGSL
FTSKVLEERAEKDAEAQSSCTENSSADQVYDWSAGLEETDDSDLYFSPDRGNVVFASAID
GWGFRIHQFAEMYSQKMGIRFSVLLKTLWGDFYLNAKAKKIMKGAQSKGKKALFVQLVLD
NIWNMYDAVVTRRDKEKVEKMVTSLGLKVMSRDLRHSDPKVLLSAICSQWLPVAQAVLSM
VCEKLPCPAEISAERVEKLMSVGARRFDSLPEQTQELKKAFLDCSAGETAPVIVFVSKMF
AVDSRALPQNKQRPLTQEEISQRRELARQRHAERQAANQSADSPRSADAGGTSTQAGPAS
GAVTDALCAQTEALSVKAAVEEENKEHFVAFARVYSGVIRKGQKVFVLGPKYNPSLALRA
LPEGCSVADVLPSIPHMSCCTVDSLYLLMGRELEELDEVPSGNVLGIGGMEEFILKSATI
STSPACPPFTPLNFEATPIVRVAVEPKHPSDMPKLVRGMRLLNQADPCAEVLIQETGEHV
LVTAGEVHLQRCLDDLRERFAKIEISASEPIIPFRETVIRPPKMDMVNEDLGKQQKVAVI
HQLKEEHMKNPESVQVDSTGLVTLTTSNKMATVGVRAIPLPEEVTRLLEDNVELIRTMEQ
FSLFAWEDKTLDINQKILENIQDFKVKLESNLQGHKWRGAVEHIWAFGPRRCGPNILLNN
IEGYRRPSIWQCLEREKETERAEIRDFDNSIVSGFQLATLSGPMCEEPLMGVCFSVETWD
MKISTPLAQRDSFDEDFQPAEPKYDDQSQRSDIHETNSNRSRSRAEATGSSVDCYGPFSG
QLIAAMKEACRYAFQARPQRLMAAMYTCEIMATAEVLGRMYAVLSKREGRVLQEEMKEGT
DMFIIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEVIGSDPFWVPTTEEEYLHFGE
KADSANQALKYRNAVRRRKGLYVEEKIVEHAEKQRTLGKNK
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgacgcaagtttggagaagataatagcactgcagaagaaaacatcacacatcagg
aatctgtgcattcttgctcatgtagatcacgggaagacgacattagcagattctctggtg
gcaagtaatgggattatatccagtcgtttagctggaaagctgagatatctggacagtaga
gaagatgagcagatcagaggaatcactatgaagtccagtggtatttcattacattacacg
acaggaggaaacgagtacctcattaatctgatcgactcgcctggtcacgtggacttctcc
tcagaggtgtccactgccgtcagactgtgtgatggggccatcattgttgttgatgccgtc
gagggagtgtgtccgcagacgcaagttgttctacgacaagcttggctggagaatatccgt
cctgttcttgtcatcaacaaaatggaccggctgatcgtggagctgaagctcacttcacag
gaggcgttcacacacctgcagaaattactcgagcaggtgaatgcagttaccggctcgtta
ttcacctctaaagtcctggaggagcgagcggagaaagacgcagaagctcagagcagctgt
acagagaacagcagcgcagatcaggtgtacgactggagcgcagggttagaagaaaccgat
gactcggacctctacttcagtcctgaccgcggaaatgtggtgtttgccagcgctatagac
ggctggggcttcagaattcatcagtttgctgagatgtacagtcagaaaatgggcatccgc
ttctcggttctgctcaagaccctgtggggcgatttctacctcaacgccaaagccaaaaaa
atcatgaagggagctcagtccaaaggaaagaaagctctgtttgtgcagcttgtcctggat
aatatctggaatatgtatgatgctgtggtcactagaagggacaaagaaaaggtggagaag
atggtgacctctctggggttaaaggtcatgtctcgtgacctgagacactcggaccccaaa
gtgctcctcagtgccatctgcagccagtggcttcctgtggctcaagctgtgctctcaatg
gtgtgtgaaaagctgccctgcccagctgagatctcggcggagagagtggaaaagctgatg
agcgtgggagcgcgcaggttcgactctctgcccgagcaaacacaggagctaaaaaaggca
tttctagattgttcagctggtgagacggcgccggtaatcgtctttgtgtcaaagatgttt
gctgtggactccagagctctgccacagaacaaacagaggccgttgactcaggaggagatc
tcccagagaagggaactggccaggcagcggcacgcagagagacaagctgccaatcagagc
gcagacagcccccggtcagctgatgctggagggacttcaacccaagcaggcccggccagc
ggtgctgtgacagatgctctgtgtgcgcagacagaggctctttcggtcaaagctgcagtc
gaggaggaaaacaaagagcattttgtggcctttgcacgagtctacagcggcgtcatcaga
aaaggccaaaaggtgttcgtgctcggacccaaatacaacccgtcgctggcgctcagagcg
ctgcctgaaggttgttcagtagctgatgttttacccagcatccctcacatgtcctgctgt
accgtggacagtctctatctgctgatgggccgggagctggaggagctggatgaagttccc
tcaggaaacgttctgggtattggtggaatggaggaattcattctcaagtcggccaccatc
tcaacatctccggcctgcccgcccttcacgccactcaactttgaagccacgcccatcgtc
agagtagcagtcgagcccaaacatccaagtgacatgccgaagctggtgcgtgggatgagg
ttactgaaccaggccgacccgtgtgccgaagtgttgattcaggagacaggagagcatgtt
ctggtcactgcaggagaagtgcatctacaacgctgcctggatgacttgagagagaggttt
gctaaaattgaaatcagtgcatccgagccaatcattccgttccgtgagacggtgatccgg
cctcccaaaatggacatggtgaacgaggacctgggaaagcagcagaaggtggcggtgatt
caccagctcaaggaggaacacatgaagaatcccgaaagcgttcaggtggattccaccggt
ctggtcacgctcaccacctctaacaagatggccacggtcggggtgcgggctattcctctt
cctgaggaagtcacccgccttctggaggacaatgtagagctcatccgcacaatggagcag
ttcagcctgttcgcctgggaggacaagaccctggacatcaaccagaaaatcttggagaac
atccaggatttcaaggtgaagttggagagcaacctgcaaggccacaaatggaggggagcc
gtggagcatatctgggcatttggtccgcgccgttgtgggccaaatattctcctcaacaat
atcgagggctaccggagaccctccatatggcaatgtctggaacgagagaaggaaaccgaa
cgggccgagatcagagactttgacaacagcattgtgagtggcttccagttggccacgctt
tctggtcccatgtgtgaggaacctttgatgggggtttgcttctctgtcgagacctgggac
atgaagatttctacacctctagctcagcgagactcattcgatgaggatttccaacctgca
gaaccaaaatatgatgaccaaagtcagcgttctgacattcacgagacaaactctaaccga
agcaggagcagagcggaggccactgggagttcggtggactgttatgggcctttctcggga
caactcatcgctgctatgaaggaggcctgcagatatgccttccaggctagacctcagcgg
ctgatggctgccatgtacacatgtgaaatcatggccactgccgaggtcctgggtcgaatg
tatgccgttctgtccaagcgggaaggacgagtcctacaagaggagatgaaggaagggaca
gacatgttcattattaaggctgtacttcctgtcgccgagagtttcggattcgctgatgag
atcaggaagaggacgagtggcctggccagcccacagctagtgttcagccactgggaggtc
atcggcagtgatccattttgggttcccactactgaagaggagtacttacactttggagag
aaagcagactcggccaatcaggctctgaaatacaggaatgccgttcgcagacgcaaaggc
ctctacgtggaggagaagatcgtagaacatgcagaaaaacagagaactctcggcaagaac
aaataa
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