Carassius gibelio (silver crucian carp): 128017393
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Entry
128017393 CDS
T08819
Name
(RefSeq) chondroitin sulfate synthase 1-like
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
cgib01100
Metabolic pathways
Module
cgib_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
128017393
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cgib01003
]
128017393
Enzymes [BR:
cgib01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
128017393
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
128017393
Glycosyltransferases [BR:
cgib01003
]
Glycan extension
O-Glycan
128017393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
128017393
NCBI-ProteinID:
XP_052458730
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All DBs
Position
A7:complement(35816334..35880034)
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AA seq
800 aa
AA seq
DB search
MAGRSRRSWFSVLLGLVVGFTLASRLILPRATELKRAGHKRRASGGAGGCGGGAGMMMMM
KEYGAPLMPSTEKPAVPRSSSFLFVGVMTAQKYLNNRAVAAYRTWAKTIPGKVEFFSSEG
SDTTIPIPIVALQNVDDSYPPQKKSFMMLKYMHDHYLDQFEWFMRADDDVYIKSEKLESF
LRSLNSSEAIFLGQTGMGARDELGKLALEPGENFCMGGPGVIMSREVLRRMVPHIRQCLQ
EMYTTHEDVEVGRCVRRFAGVQCVWSYEMQQLFYENYEPNKKGYIRDLHNSKIHRAITLH
PNKNPPYQYRLHSYMLSRKIAELRHRTIQLHREIVQMSRYSNTEVNKEDLQLGMPPSFMR
FHPHQREEVLEWEFLTGKYIFSSSDGQPPRRGIDSSQKMALDDIIMQVMEMINANAKTRG
RVIDFKEIQYGYRRVNPMYGAEYVLDLLLLYKKHKGKTMTVPVRRHAYLQQTFSKIQFLE
DEEMDARVLAARINQDSDSLSFLSNSLKMLVPFKLSSQSGIKQHEPKEKKINILVPLAGR
YEIFVRFMANFEKICLIPNQNVKLLILLFSTDNNTERIKQIELMREYHMKYPKADMEIKP
VSGPFSRALALEVGSAHFTNDSLLFYCDVDLLFTPDFLTRCRGNTILGEQTYFPIIFSQY
DPKVVYAGKVPSDNHYVFTSKTGLWRHYGYGIVCIYKGDLVKAGGFDVSIQGWGLEDVDL
FNKFVQSGIKLFRSTDTGIVHVHHPVVCDPNLDPKQYKMCLGSKASSHGSTQQLAELWLE
KNNHGFRKISNSNNDSVRTE
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcagaagccgcaggtcgtggttcagcgtgctgctggggctggtggtcgggttc
acgctggcgtccaggctcatcctgccccgagccaccgagctcaagagagcgggtcacaag
cggcgcgcaagcggcggcgcgggcggctgcggaggaggagcggggatgatgatgatgatg
aaggagtacggagcgccgctgatgcccagcacggagaagcccgcggtgccccggtccagc
agtttcttgttcgtgggcgtcatgaccgcgcagaagtacctgaacaaccgcgccgtggcg
gcgtacaggacctgggccaagaccatcccgggcaaagtggagtttttctccagcgagggt
tcagacacgacgatccccatccccatcgtggctctgcagaacgtggacgattcgtaccct
ccgcagaagaagtccttcatgatgctcaagtacatgcatgaccactacctggaccagttc
gagtggttcatgcgagccgatgatgacgtctacatcaaaagcgagaagctggagagcttc
ctaaggagtctcaacagcagcgaggccatcttccttggccagacgggcatgggtgcccgc
gatgaactgggcaagctggccctggaaccgggcgagaacttctgcatgggcggccctggt
gtgatcatgagccgtgaggtgctgcgcaggatggtgccccacatccgccagtgcctgcag
gagatgtacaccacccacgaggacgtggaggtgggtcgctgcgtgcgcagattcgccggc
gtccaatgcgtctggtcctatgagatgcagcagctgttctatgagaattacgagccaaac
aaaaagggctacatccgtgatctccacaacagcaagatccaccgggccataacccttcac
cccaacaagaacccgccgtaccagtatcgcctgcacagctacatgttgagccgcaagatc
gcggagctgcgccaccgcaccatccagctccaccgcgagattgtgcagatgagccgctac
agcaacaccgaggtgaacaaggaagacctccaactgggcatgcctccgtccttcatgcgc
tttcatccccaccagcgggaggaggtgctagaatgggagttcctcacgggcaagtacatt
ttctcgtcctcagacgggcagcctccacgtcggggcatcgactcctcgcagaagatggcg
ctggacgacatcatcatgcaggttatggagatgattaacgccaatgccaagacgcgagga
agagtcattgacttcaaagagatccagtacggataccgaagggtcaaccccatgtacggg
gcggagtacgtactggatctgctgctgctctacaagaagcacaaggggaagaccatgacg
gttcctgtaaggaggcacgcctatctccaacagaccttcagtaagatccagtttttggaa
gacgaggagatggacgcccgagtcctggctgccaggatcaaccaagactcggactcgttg
tccttcctgtccaactctctcaagatgctcgtcccattcaaactgagcagccaatctggc
atcaaacaacacgaacccaaagagaagaagatcaacatccttgtgcccctggcgggacgc
tacgagatctttgtgcgcttcatggccaacttcgagaagatttgcctgattcccaaccag
aacgtcaagttgctgattctgctctttagcacagacaacaacacggagcgcattaagcaa
atcgagctcatgagggagtatcacatgaaatatcccaaagccgacatggagatcaaacca
gtttctggacccttctcccgtgctctggccctagaggtcggctcggcccactttaccaat
gattccttgctcttctactgtgacgtggacttactgtttacccccgacttcttgaccaga
tgtcgtgggaacaccatacttggggaacagacgtactttcccatcatcttcagccagtat
gaccctaaggttgtctatgcaggcaaggtgcccagtgacaaccactacgtgttcacatcc
aaaacaggcttgtggagacactacggttatgggatcgtctgcatctacaaaggagacttg
gtcaaagcgggtggctttgacgtctccatccaaggctggggactggaagacgtggacctc
tttaacaaattcgtccagtccgggatcaagctgttccgcagcacggacaccggaatcgtg
cacgtccaccaccctgttgtttgcgacccaaacctcgatcccaagcagtacaaaatgtgc
ctgggatccaaagcatcctcgcacggctccacgcagcaactcgcggagctgtggttggag
aagaacaaccacggcttccgaaagatctcgaactctaataacgattcagtgaggacagaa
tag
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integrated database retrieval system
