Carassius gibelio (silver crucian carp): 128017734
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Entry
128017734 CDS
T08819
Name
(RefSeq) VPS10 domain-containing receptor SorCS3-like
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
128017734
Membrane trafficking [BR:
cgib04131
]
Endocytosis
Others
Others
128017734
Endosome - Lysosome transport
128017734
Endosome - Golgi transport
128017734
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
128017734
NCBI-ProteinID:
XP_052459164
LinkDB
All DBs
Position
A1:complement(29083966..29263656)
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AA seq
1243 aa
AA seq
DB search
METRLVVFPGAHFTLSTWLILSFLCVFPNIKAEISCAPCMSPMQVNYAGDEHLRDPPDSG
KYPRQDQKKPKLITVLYPNVGVPTELEVDGFPGIAPKLIRNAEGIHSRAPLENFTESALD
EELFSDEYVKSETELESEDVAFGRAKRSVPEFLESARSADARSEEQRKSSGLRMDGQSKR
AEVRWNKDDEHDGRESDSRPDEPKLTSSTFALAGDSAHNHAVVYWTGKNSSVILILTKLY
DFHLGSVTESTLWRSTDYGSTYERLNDKVGVKTVLSYLYVCPTNKRKIMVLTDPEFESSV
LISSDEGASYQKYRLNFFVLSLLFHHTQEDWALAYSHDQKLYSSFDFGRKWQLVHERVTP
NRFYWSVTSLDKELDLVHMEAHTPDGHCQYVTCRAQACSESSRTYPFSGYIETNSLVVQD
EYVFVQVTTTGRASYYVSYQREPFVRIKIPKYSLPKDMHIVSTDQGQVFTAVQEWNQNDT
YNLYISDTRGVYFTLALENVRTSRGLGGNSMIDLYEVAGIEGMLLANRKVENQVKTYITY
NKGRDWRLLQAPPTDLAGNPIHCVLPFCSLHLQLQMSENPYLSGSISTKSSAPGVIVATG
NIGSELSYNNVAMFISSDAGNNWRQIFEEEHNVWFLDKGGALVAVKQPTVPTRHLWISFD
EGRQWTRHSFSAMPLFVDGVLVEAGAENQIMTFFGHFSHRSEWQLIKIDYKSIYTRRCTE
GDYQTWHLHNQGEPCIMGQKQIYMKRRPGNYCMVGWENSRILSAEPCICRAHDFECDYGF
ERRGIGNCLPAFWFNPSTLSRSCSQGQNYLNSTGYRKVVANNCTKGVKEMYTARKQQCPY
RPPRGLVLTTRDDKLTANMGSNVTFLVRLEEGDSMRTNIQLDFGDGTAVSYSNLSWTQEG
IRHVYHSAGIFRVTAQAENNLGFDTSSLYLHVTCPVEHIQLLAPYVVIKNKEVNLTAVVW
PSHFRTLTYFWWLGNNTEPIITLDSSVSHTFGTEGMITVTVQISSGDSILQDTRSITIQE
FFKSLLLSFSPNLDEANPDIPEWRQDVGRVIKKAVLQVADIPEEQLLVAVFPGIPTGAEL
FLLPPPRNQSDGRKQTEEDLEQISEILVNALNQVSVEFELKPGSRVIVYITQLTLAPLVD
SIPRHSSSAMLMLLSVVFLGLAVFLIYKFKRKIPWINIYAEVNHEKEQEMISTVGQNDAT
PKITLSEFSTQKELMEKELEARAKRGVINTCESTREIPNCTSV
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atggagacccgtctggttgtattccctggcgctcactttactctttctacctggcttatt
ctttccttcttgtgtgtttttccaaatataaaggcagaaataagttgcgcgccatgtatg
tcgccaatgcaagtgaattacgcaggggatgagcatctgcgtgacccgcctgattctggg
aaatatccgagacaggatcaaaagaaacccaagctgatcacagttctttacccgaatgtt
ggagtacccactgaattagaggtggatggttttccagggatcgcgccgaaactgataaga
aacgcagaggggatacactcacgtgcgcctttggagaacttcacagagtccgctttagat
gaagaattgttttcggatgaatatgtgaaaagtgaaaccgaattggaatccgaggacgtc
gcattcgggagagccaaaagaagcgtgcctgagtttctggagagcgcgcggagcgctgat
gctcgctcggaggagcagagaaaatcctccggtctgcggatggatggacagagtaaacgc
gccgaagttcgctggaacaaggatgatgagcacgatggcagagaatcggattccagacca
gacgaacccaaactgaccagcagcacttttgctctggctggagactccgcacacaaccac
gcagtcgtgtactggactggaaaaaacagcagtgtgattctgattctcaccaagctgtat
gattttcaccttggcagtgtaacggaaagcactttatggagatcaaccgattatggcagc
acttatgagaggctgaatgataaagtgggagtcaagactgttttgagttacctctatgtc
tgccctaccaacaagagaaagataatggtgctgactgacccagagtttgaaagcagtgtt
ctcatcagctcggatgaaggtgccagttatcagaagtaccgcttgaacttcttcgtctta
agtcttcttttccatcacacacaagaggactgggctttggcttacagtcacgatcaaaag
ttgtatagctcatttgactttggccgaaagtggcagctagttcatgagcgagtgactcca
aaccgcttctactggtcagtaaccagtctggacaaggagttagatctggtgcacatggag
gcccacactcctgatggccattgtcagtatgtgacatgcagagctcaagcctgctcggaa
tccagtaggacatatccattttctggttatattgagaccaactctctcgtggttcaagat
gaatatgtgtttgttcaggtgacgactactggcagagcaagctactatgtatcctatcaa
agagaaccttttgtacgcattaaaatccccaaatactccctgcccaaggacatgcatatc
gtgagcacagatcaaggtcaggttttcaccgctgtccaggagtggaaccagaacgatacc
tacaacctgtacatatctgacacgcgtggggtatacttcaccttggccctggaaaacgtc
aggaccagccgtggccttggaggcaacagcatgatcgacctttacgaggtagcagggatt
gaaggtatgctcctcgctaacaggaaggtggagaaccaggtgaagacgtacattacttat
aacaagggcagagactggaggcttttgcaggcgccccctactgacctggcaggaaatccc
attcattgtgtgctgccgttttgctcgctgcatctacaactgcagatgtcagagaacccg
tacctctcaggctccatctccactaagagctcagcgccgggagtcatcgtggctacagga
aatattggctctgagctgtcttacaataatgtggcgatgttcatttcatcagatgcaggc
aataactggagacagatctttgaggaagagcacaacgtgtggtttttggacaaaggtgga
gctttggttgccgtgaagcagcccactgtgcccactagacatctttggatcagctttgat
gagggtcgtcagtggacgcgtcacagtttctcagccatgccgctgtttgtggatggtgtt
ctggtggaggcaggtgcagaaaatcagatcatgacgtttttcggacacttcagtcatcgt
tctgaatggcagcttattaaaattgactacaagtccatatacaccagaaggtgcacagag
ggagactaccaaacttggcacctgcataaccagggtgagccgtgtataatgggtcaaaag
cagatatacatgaaacgtcgtcccggaaactactgcatggtgggatgggaaaactccagg
atcttgtctgcagaaccctgcatctgcagagcacacgactttgaatgtgattatggtttt
gagagaagagggattggaaactgtcttcctgcattttggttcaacccttctacattgtct
cgaagctgtagccaaggacaaaactacctcaacagcactgggtatcgtaaagtggttgcg
aataactgcacgaaaggagtgaaggagatgtacacagccaggaaacagcagtgtccgtac
cgccccccaagaggtttagttctgacgacccgtgacgataaactcacagccaacatgggc
agcaatgtgaccttcctggtgcggctcgaggagggcgactctatgaggacaaacattcag
ctggattttggagacggtacggctgtgtcctactccaacctgagctggacgcaggagggc
atcagacacgtgtaccacagtgctgggatctttagagtaacagcgcaggcggagaacaac
ctcgggttcgacacctcatccctctacctgcatgtgacatgccctgtagagcatattcag
ctgctggctccatatgtggtcattaagaataaggaggtgaacttgacggcagtggtctgg
ccttctcatttcagaacgctcacctatttctggtggctggggaacaacacggagcccata
attacgttggacagcagtgtttcccacacgttcggcactgagggcatgatcaccgtcact
gttcagatctcgtcaggagactctatactacaggacaccagaagcatcaccatacaagaa
ttcttcaaatcgcttcttttatctttctctccgaatctggacgaggccaaccctgacatc
ccggagtggagacaggatgtgggtcgggtaattaagaaggctgttctccaagtcgctgac
attccagaagagcagctgctggtggccgtgtttccaggcattccgactggcgccgaactc
ttcctgcttcctcctcctaggaaccaatcggatggcaggaaacagaccgaggaggatctg
gagcagatctcagaaatcctggttaatgcactgaatcaggtctctgtggagttcgagttg
aaacctggctcccgggtcatcgtttacatcacgcaattaactttagctccactggttgac
tccatcccgagacacagcagttctgctatgctgatgcttctgtctgtggtgtttttgggt
ttagctgtatttcttatctacaaatttaagagaaaaatcccctggattaacatctacgcg
gaggtgaaccatgagaaagagcaggagatgatcagtacggtgggccagaatgacgccaca
ccaaaaatcaccctgagtgagttctccacccagaaagaactgatggagaaagagctggag
gcccgtgccaaacgcggtgtgatcaacacctgtgaaagcacaagggagatcccgaactgc
acgagtgtctga
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