KEGG   Carassius gibelio (silver crucian carp): 128018266
Entry
128018266         CDS       T08819                                 
Name
(RefSeq) ras-related protein rab7-like isoform X1
  KO
K07897  Ras-related protein Rab-7A
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib04137  Mitophagy - animal
cgib04140  Autophagy - animal
cgib04144  Endocytosis
cgib04145  Phagosome
cgib04148  Efferocytosis
cgib05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    128018266
   04145 Phagosome
    128018266
   04140 Autophagy - animal
    128018266
   04137 Mitophagy - animal
    128018266
   04148 Efferocytosis
    128018266
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    128018266
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cgib04131]
    128018266
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cgib04147]
    128018266
   04031 GTP-binding proteins [BR:cgib04031]
    128018266
Membrane trafficking [BR:cgib04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    128018266
Exosome [BR:cgib04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   128018266
  Exosomal proteins of other body fluids (saliva and urine)
   128018266
  Exosomal proteins of colorectal cancer cells
   128018266
  Exosomal proteins of bladder cancer cells
   128018266
GTP-binding proteins [BR:cgib04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    128018266
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU RsgA_GTPase AAA_7 Gtr1_RagA ATP_bind_1 cobW PduV-EutP nSTAND3 Septin AAA_16 NTPase_1 G-alpha AAA_22 AAA_24 ATPase_2 SRPRB MCM RuvB_N DAP3 AAA_5 ABC_tran ATP-synt_ab TniB NACHT
Other DBs
NCBI-GeneID: 128018266
NCBI-ProteinID: XP_052459645
LinkDB
Position
A8:complement(6282417..6291113)
AA seq 232 aa
MIFVEDSERAPIIKTAATVNVKSLLLHIMSSRKKVLLKVIILGDSGVGKTSLMNQYVNNK
FSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVYDVTA
PTTFKTMDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVTTKRAQAWCQSKNNIPYF
ETSAKEAINVDQAFQTIARNALKQESVETYDFPDQIKLRDDRPVSSSDGCSC
NT seq 699 nt   +upstreamnt  +downstreamnt
atgatttttgtagaagattcggaaagggcaccgattatcaaaacagcagcgacggtaaac
gtgaagagcttactcctacacatcatgtcctcccgaaagaaggtgctgctcaaagtgatc
atcctaggggattctggagtcgggaagacctctctgatgaaccagtatgtgaataacaag
ttcagtaatcagtataaggccactattggagccgacttcctgacgaaggaggtgatggtg
gacgacagactggtcaccatgcagatttgggacacggcgggacaggagcgctttcagtct
ctgggcgtggcgttctaccgaggggcggactgctgcgtgctggtgtacgacgtcaccgca
ccaactacattcaagaccatggacagctggagggacgagttcctcattcaggccagtcct
cgtgacccggagaacttcccctttgttgtgctgggcaataaaatcgacctggagaaccgg
caggtaacgacaaagcgagctcaagcatggtgtcagagtaagaacaacatcccctatttt
gagaccagtgccaaagaagccattaatgtggaccaggccttccaaaccatcgctcgcaat
gcacttaaacaggagtcggtggagacgtatgacttccctgaccagattaaactgagagat
gacagaccggtgtctagcagtgatggctgtagctgctga

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