KEGG   Carassius gibelio (silver crucian carp): 128018327
Entry
128018327         CDS       T08819                                 
Name
(RefSeq) charged multivesicular body protein 4c
  KO
K12194  charged multivesicular body protein 4A/B
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03250  Viral life cycle - HIV-1
cgib03272  Virion - Hepatitis viruses
cgib04144  Endocytosis
cgib04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    128018327
   03272 Virion - Hepatitis viruses
    128018327
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    128018327
  09143 Cell growth and death
   04217 Necroptosis
    128018327
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cgib04131]
    128018327
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cgib04147]
    128018327
Membrane trafficking [BR:cgib04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    128018327
Exosome [BR:cgib04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   128018327
  Exosomal proteins of other body fluids (saliva and urine)
   128018327
  Exosomal proteins of colorectal cancer cells
   128018327
SSDB
Motif
Pfam: Snf7 SYF2 Decapeptide DUF6437
Other DBs
NCBI-GeneID: 128018327
NCBI-ProteinID: XP_052459738
LinkDB
Position
A8:8241845..8244802
AA seq 223 aa
MSVFGKLFGGGGKGGKGPSPQEAIQKLRETEEMLTKKQEYLEQKINAELLTAKKNGTKNK
RAALQALKRKKRYEKQLAQIDGTLSTIEFQREALENANTNTEVLKNMGFAAKAMKTAHEN
MDIDKVDDLMQDITEQQELAQEISDAISRPVGFGEDYDEDELLAELEELEQEELDKNLLE
IGGTEDVPLPSVPSNPLPKKSAAQKKRVEEDEDDMEDLKAWAM
NT seq 672 nt   +upstreamnt  +downstreamnt
atgtccgtatttggcaaactgtttggcggtggggggaaaggaggcaaaggcccgagccca
caagaagccattcagaaactccgtgagacagaagagatgttaaccaagaaacaagagtac
ttagagcagaagattaatgcggaactgttaacagcaaagaaaaacggcacaaaaaacaaa
cgagctgctttacaagccttgaaaagaaagaagcgatatgagaagcaactggctcagata
gatggcactctctccactattgagttccagcgggaagcattggagaatgctaatacaaac
acagaagtgcttaaaaatatgggctttgcagccaaggccatgaagacagcccatgaaaat
atggatattgacaaagtggatgacctcatgcaggacatcacagagcagcaggagttggca
caggagatatccgatgccatttcaaggcctgtaggttttggagaagactatgatgaggat
gagctcttagctgaattggaggagttggaacaggaggagctggacaagaacctgctggag
atcggtggcactgaggatgtccctctgccgagtgtgccttcaaacccattacccaagaaa
tctgctgcccaaaaaaagagagtagaggaggatgaggatgacatggaagatctcaaggca
tgggccatgtga

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