Carassius gibelio (silver crucian carp): 128018367
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Entry
128018367 CDS
T08819
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
128018367
Spliceosome [BR:
cgib03041
]
Common components
Common spliceosomal components
General mRNP proteins
128018367
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
PRP38_assoc
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
128018367
NCBI-ProteinID:
XP_052459802
LinkDB
All DBs
Position
A8:9395092..9404239
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AA seq
539 aa
AA seq
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MADDFDVEAMLEAPYRKGESKSSSANGQNEERSKKKRRSSSRSPSPGRHRSRSGGRKKSR
ERRRSRSRERKRSRSRERKKSRSRSKDRGGHHRGRKSPFMGPKLNGGPGGKTGPQHFPKH
SRRRSRSRSPFKKNKSPFKKNKSPFKKNKSPVRQPIDNLSPEERDARTVFCMQLAARIRP
RDLEDFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVDATSVPLAIGLTGQRVLGVPIIVQ
VSQAEKNRAAAMASMLQRGGAGPMRLYVGSLHFNITEDMLRGIFEPFGKIEGIQLMMDSE
TGRSKGYGFISFADAECAKKALEQLNGFELAGRPMKVGHVTERSDASSASSFLDNDELER
TGIDLGTTGRLQLMARLAEGTGLQIPAAAKQALQMSGSVAFGNLANAATTQPLVPNPGMN
QAMNLPSEPLATHCLQLSNMFSPQTENEPGWDLEIKDDVIEECRKHGGIIHIYVDKNSPQ
GNVFVKCPSIPVAMAVVGALHGRWFAGKMITAAYVPLPTYHNLFPEAATATELLRPMHR
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgacttcgatgttgaggccatgctggaagcgccttacagaaagggtgaaagc
aagtcctccagcgccaatggtcaaaatgaggaacgcagcaaaaagaagagacgcagtagc
agtcgtagtccgagtccaggtcggcacaggagtagaagcggaggccgcaagaagagccgc
gagcgacgcaggagccgtagccgagaacgcaaacgttcccggagcagggagcgcaagaag
tcgcgatcccgcagcaaggatcgtggtggacaccaccgtggacgcaaaagcccctttatg
gggccgaaattaaatggtggtcccggagggaagactggcccacaacatttccccaaacac
agtcgcaggcgctctcgaagcagaagcccgttcaagaagaacaaaagcccgttcaagaag
aacaaaagcccgttcaagaagaataaaagccctgtcaggcagccgatagataatctgagc
ccagaggagagagacgcccgtacagtgttctgcatgcagcttgctgccagaatcagaccc
agagatctggaagatttcttctctgcagtgggaaaagtccgtgacgtaaggatgatctca
gatagaaactctcggaggtcaaagggcattgcctacattgagtttgtggatgcgacatcg
gtaccgctggcaatcggcctgaccgggcagagggttctgggagtgcctatcatagtccag
gtttcacaggctgagaagaacagggcagcagccatggccagcatgctccagagaggtggt
gcagggcccatgcggctctacgtgggctccctccacttcaatataacggaggacatgctc
aggggcatttttgagccattcggaaagattgagggcatccagctgatgatggacagtgag
actggccggtcgaaaggatacggcttcatatcatttgcagatgcagaatgtgctaaaaaa
gctctggagcagctaaatgggttcgagcttgcgggacggccaatgaaggtgggtcatgtt
actgagcgttcggatgcctcctctgcaagctccttcttggacaatgatgaactggagaga
actggcattgacttgggcacgacgggtcgacttcagctgatggcgagactggctgaaggt
acaggactgcagattcctgctgctgccaaacaggccttacagatgagcggctctgtggcg
tttggaaatctggcgaatgccgcaaccacacaacctcttgttcccaatcctggaatgaac
caagctatgaaccttccaagtgagccactggccacgcattgtttacagctctccaacatg
ttcagtccacagacggaaaatgaacctggctgggacctggagataaaggatgacgtcatc
gaagagtgcagaaaacacggaggcattattcacatatacgtcgacaagaactctcctcaa
ggaaatgtttttgtaaagtgtccatccatcccagtagcaatggctgttgtcggcgcgctg
cacggccggtggtttgcaggtaaaatgatcacagcagcctacgtgcctctacctacgtac
cataacctgtttccagaagctgccacagccacagagctcctgaggcccatgcaccggtga
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