KEGG   Carassius gibelio (silver crucian carp): 128018372
Entry
128018372         CDS       T08819                                 
Name
(RefSeq) lysine-specific demethylase 5C-like isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
cgib  Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cgib01009]
    128018372
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cgib03036]
    128018372
Enzymes [BR:cgib01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     128018372
Protein phosphatases and associated proteins [BR:cgib01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     128018372
Chromosome and associated proteins [BR:cgib03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    128018372
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID JmjN zf-C5HC2 PHD XkdW DUF7793
Other DBs
NCBI-GeneID: 128018372
NCBI-ProteinID: XP_052459812
LinkDB
Position
A8:complement(9472559..9490528)
AA seq 1575 aa
MDGWEEFVPPPECPVFEPSWEEFADPLGYIAKIRPIAEKSGICKIRPPPDWQPPFAVEVD
NFRFTPRIQRLNELEAETRVKLNYLDRIAKFWEIQGSSLKIPNLERRILDLFSLAKIVTE
EGGFEAVCKERRWARVAQKLGYPPGKNIGSLLRSHYERIVYPFELFQSGASLPPCKPRLY
DTDEIDREYKPHSIPLRQSVPPSKISSYGRRANRLKPEGPEDPTLHPLTTGSQHVSSPEP
TEEDIEKNPELKKLQIYGAGPKMMGLGLVPRDKTRKKDELPQMVIVRDSAASASVKDEPG
ETPVTTSDPEIPPPPLNLIVKEDVVDEKNHTDDPNDSGDEPCTKMTMRLRRNLSNPQFVD
SFVCRMCGRGDEDEKLMLCDGCDDNYHTFCLIPPLSDPPKGNWRCPKCVAEECKKPTEAF
GFEQATREYTLQSFGEMADTFKADYFNMPVHMVPTELVEREFWRLVSSIEEDVTVEYGAD
IHSKEFGSGFPVNNGKKHLSDEEEEYARSGWNLNVMPVLEQSVLCHINADISGMKVPWLY
VGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSSAAEKLEEVMKKLTPELFEFQPDL
LHQLVTIMNPNILMAHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWL
PTGRSCIEHYRRLRRYCVFSHEELTCKMAACPEKLDLNLAAATHREMFIIVQEERKLRKG
LLERGIKEAEREAFELLPDDERQCDKCKTTCFLSALACSNCQERLVCLYHAQDLCSCPSE
KLYLRYRYTLDELLAMLHRLKVRAESFDSWANRVKEALEQEEGNKIDIKDLEVLKGEAAD
KKFPNNELLQRLNTVFVDIHKCESSSTELLSNSQSRRMSLEELRTLVDTMQNLPCVVKPL
EEVQAVLQKIEEFDARAQALVDSTKGEWKQDSPLPTAAEIQALLEEGASLPVVAPACELL
SGLQEQGRWLGEVRRTLGPEGSEVTLAVLRNLMESGCNVPQSVSVETAMAELQELLTIAE
RWEEKAQICLEDRQKHHLSTLEAIVNEAQLIPVQLPNILSLQACLSRARAWVTDLEEIQN
GEHYPCLDDLEGLVAIGRDLPVNMEELKQLELQVASAHSWREKASKTFLKKNSQHSLLEV
LCPCVEKSKKREESSLGTEEDSDVNVLGLTAQDLRDPGAIVMAFKEGERQEKEALLRLQQ
VNLTKPGVEKGTNGYQNGIKTERTQSDSMETDLPHNSDSTLLQNGGSAPSLTSSHSVCVC
NDPPRPLLHRCHLCKDWFHGGCVPFPSLLCSPEANLTKPLCWWDWNTRFLCPRCQRSRRP
RLETILALLVALQKLPVRLPEGEALQCLTERAINWQGRAKQALDTPEVQRALERLQQVEE
DMSSIKEEEPEEKNTWNGDTVIVLSDSEETEDGVIDLTEDVNSPKKSEEKVANGSQSGCQ
NGVAKSSGINDITGVESLLSLVPCLKGPVIELTTSTRAQLEELQLEVDLLEVTLDQTHSI
HRILQAASQPPREALHTLIQIELQEQRSSGHGSKSKDSRRKRKSQKTESEAKSTEASECK
KTKSSDPHTDILMIS
NT seq 4728 nt   +upstreamnt  +downstreamnt
atggatggatgggaagagttcgttcctccgccggagtgtccagtgtttgaaccgtcatgg
gaggagttcgccgatcctctgggatatatcgccaaaatccgtccaatagcagaaaagtct
ggaatatgcaagattcgcccaccacctgactggcagccaccgtttgcagtggaggtggac
aatttccgtttcacaccacgtattcagagactcaatgagcttgaggctgagacacgagtg
aagctaaattatctggacagaattgccaagttctgggagatccagggatcctctctgaag
atccccaatctagagcgacgtattctcgatctgttcagcttggccaagatcgtgacagag
gaagggggtttcgaggcggtgtgtaaggagagacgctgggcacgcgtggcacagaaactc
ggttatcctcctggcaaaaacatcggctctctcctgaggtcgcactatgagaggatcgtc
tatccgtttgagttgttccagtctggagccagtttaccgccatgtaaacccaggctgtat
gacactgatgagatcgaccgggagtacaaaccccactccattcctctccgccaatcagtc
ccgccgtccaagattagcagttatggacgacgagccaatcgcctcaagcctgagggtcca
gaggatccaactctccaccctcttacaactggctcgcaacacgtctcctcgccggagccg
acagaggaagacatcgagaagaaccctgagctgaaaaagctacagatctatggggctgga
ccaaaaatgatggggctcggtcttgtacctcgagacaagacacggaagaaagatgagctg
ccacagatggtaatagtgcgggacagcgctgccagtgcgtctgtgaaggatgaaccagga
gaaacaccagtcactacatcagatccagagattcccccaccacccctaaatctcattgtc
aaggaggatgttgttgatgagaaaaaccacactgatgatcctaatgactccggtgatgaa
ccctgcaccaagatgaccatgagactccgacgcaacctcagtaacccacagtttgtggac
tcgtttgtgtgccggatgtgtggacgcggggacgaggatgagaagctgatgctctgtgat
gggtgtgatgataattatcacacgttctgtctgatacctccgctctcagatccacccaag
ggcaactggcgctgtcccaaatgtgtagcagaggagtgtaaaaagccaacggaggcgttt
ggtttcgagcaggccacacgggagtatacattacagagctttggtgagatggccgacact
tttaaagccgactacttcaacatgcctgtccacatggttcccacagagctggtcgagaga
gagttctggaggctggttagtagtattgaagaagatgtaaccgtagaatatggtgcagac
attcactcgaaagaattcggtagtggttttcctgtcaacaatggcaagaaacacttgtca
gatgaggaagaggaatatgcccgcagcggctggaatttaaacgttatgccggtgttggag
cagtcagtgttgtgtcacattaatgccgatatctctggcatgaaggtgccatggctgtat
gtgggcatggtgttctctgctttctgttggcacatagaggaccactggagctactccatc
aactatttacactggggtgagcccaaaacgtggtatggtgtgccatcgtctgctgcagag
aagttagaggaggtgatgaagaaactcacacctgagctgttcgagttccagccagacctg
ctccaccagcttgtcaccattatgaacccaaatatactcatggctcacggagtgccggtg
gttcggaccaatcagtgtgctggggagtttgtcatcacttttccacgagcttatcacagc
ggtttcaatcagggatacaacttcgccgaagcagtaaacttctgcactgcagactggctg
cccacagggcggtcttgtattgagcattaccggcggctgaggcgctactgtgtgttctct
cacgaggaactcacctgcaagatggcggcctgcccagagaagctggatctgaacctggca
gccgccacgcacagggaaatgttcatcatcgtacaggaggagaggaaactacgcaaaggc
cttctggaaaggggaataaaggaagctgaaagggaagcctttgagttgctgcctgatgat
gaaaggcaatgtgataaatgtaagaccacctgcttcctctcggccctggcgtgttcgaac
tgccaagagcgtcttgtgtgcctctaccatgcccaggacctctgctcctgccccagtgaa
aaactctacctcaggtatcgctatactctggatgaactcttggccatgttgcatcggctg
aaagttcgcgctgagtcttttgactcctgggccaaccgagtgaaggaagcactagagcag
gaagaaggaaacaaaatagacattaaagatctggaggttctgaaaggagaggcagctgac
aagaagttcccaaataatgagctgcttcagcgcctcaacacagtcttcgtggacatacac
aagtgtgaaagcagtagcacagagctcctcagcaacagccagagcaggagaatgagtctg
gaggagctgaggactctggtggacaccatgcagaacctgccctgtgttgtaaaaccgctg
gaggaagtgcaggcggtattgcagaagatagaggagtttgacgcacgtgctcaagctctg
gttgacagcacaaagggcgagtggaagcaggactctcctctacccacagcagcagagatc
caggccctgctggaggagggagcatcgctgcccgtggttgccccggcatgtgagctcctg
agtgggctgcaggagcagggtcgttggctgggagaggtcaggcggacgttggggccagag
gggagcgaggtgactctggctgtgctgaggaacctgatggagtcaggctgtaatgtacca
cagagcgtatcggtggagactgccatggctgagctgcaagagctgctgactatagccgag
cggtgggaggagaaggcacagatctgtctggaggacaggcagaagcaccatctgtcaacg
ctggaggctatcgtgaacgaggctcagctaataccagtgcagctgccgaacatcctgtcc
ctgcaggcctgtttgagcagagctcgcgcttgggtcactgatctggaggaaatccagaat
ggtgagcactacccctgtctggatgacctggagggtttggtggccattgggcgggacctg
ccggtgaacatggaggagctgaagcagctggaactgcaggtggccagcgctcactcctgg
agagagaaggccagcaaaaccttcctgaagaagaacagtcagcacagtcttctggaggtg
ttgtgcccatgtgtggaaaagagcaagaagagggaggagagctcactgggtacagaagaa
gattctgatgtcaatgtattaggcctcactgctcaggacctccgagacccaggagctatt
gtgatggcattcaaagaaggggagcgtcaggagaaagaggccctgctccgcctccagcag
gtgaatctaactaaacccggtgtggaaaaaggaacaaacggttatcagaacggcatcaag
acagaaaggacacagagtgactctatggagacagacttgccacacaactcggacagcacc
ttgctgcagaatggtggctccgccccttctctcacctctagccattcagtgtgtgtgtgc
aatgacccgccccgccccttgcttcaccgatgccatctgtgcaaagactggttccacgga
ggttgtgtgcccttcccatcactgctgtgctccccggaagcaaatcttacaaagcccctc
tgctggtgggactggaacacacgtttcctctgtccgcggtgccaacggtcccggcggcct
cggctggaaaccattcttgcgctgctggtggcgctacagaagttacctgtacgcctgcca
gagggagaggcattacagtgtcttacagagagagccattaactggcagggtcgagccaaa
caggcactggacactccagaagtacagagggcgctagagagactccaacaagtggaggag
gacatgagcagtataaaagaagaagagccagaggagaagaacacatggaacggggacact
gtaattgtgttgtctgactcggaggaaaccgaagatggtgttattgatctgacagaggat
gtgaactcgccaaaaaagagtgaagagaaggttgctaatggttcacagtctggctgtcag
aatggagtcgctaagagttcaggcattaatgacattacaggggtggagtctctgctgtca
ctagtgccgtgtcttaaagggccggtgatcgagctgaccacatccaccagagcacagctg
gaagagcttcagctagaagtggacctgcttgaggtcacgctggaccagacacacagcatt
caccggatcctacaggcggcatcacagccgccccgtgaggccctgcacacgctcatacag
attgagctgcaggagcagagaagctcaggtcatggcagcaagtcaaaggactccaggagg
aagagaaagagccagaaaacagaaagcgaggctaaatccacagaggcttctgaatgcaag
aagaccaaatcttcagatccacacacagatattttgatgatttcctga

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