Carassius gibelio (silver crucian carp): 128018447
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Entry
128018447 CDS
T08819
Name
(RefSeq) hepatocyte nuclear factor 1-alpha-like
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
128018447
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
128018447
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
HTH_5
HTH_37
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
128018447
NCBI-ProteinID:
XP_052459900
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Position
A8:complement(11273070..11292467)
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AA seq
449 aa
AA seq
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MIKTYMQQQNLPQREVVESTGLNQSHLSQHLNKGTPMKNQKRAALYSWYVKKQAEISQQF
TNASRGVGSGEESGDDVRKGRRNRFKWGPASQQILFQAYERQKNPSKEEREGLVEECNRA
ECLQRGVSPSQLAGLGSNLVTEVRVYNWFANRRKEEAFRHKLALDGPYSSQSDPLTGQTL
PSSPSPDLKYSQPVVCESLGTVRSSSGEGRGCLASPVQLDPSHTLLDTHHHKSASGGGSL
PPVSTLTSLHGVSGSSAAPTGLIMASLPSVMSLGDSSLFIGLTSSQPQTDINNVGGGFTT
LQPISFQQHLHTSPQQPTVQQLQSHIGPSSFMATMTQLPCHMYSKADLSSFPSSSLLSQA
MVIADSNSIGTLTNLTAVRQILTSDPEAHSETPIEEESLHLQSTSPEPVSSGSLDLYPQT
SDPHPSHLLSSPPGDIDPYIPTHMVSPAQ
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgataaagacctacatgcagcagcaaaacctgccacagagagaggtggtggagtccaca
ggcctcaaccaatcccatctctctcagcacctcaacaagggcacacccatgaagaatcaa
aagcgtgccgctctgtacagctggtacgtcaagaaacaggcagagatcagccagcagttc
actaatgccagtcgaggtgttgggtcaggagaggaatctggggatgatgtgagaaaggga
cgaaggaatcgattcaaatggggcccagcatcccaacaaatcctgttccaggcctatgaa
cgacagaaaaaccccagtaaggaggaaagggagggactggtggaggagtgcaacagagcg
gaatgtcttcagaggggagtttctccatctcagctggctggcctgggctctaatttggtc
acagaggttcgtgtgtataattggtttgcgaatcggcgtaaagaagaggcatttcgccat
aaactggcactggacgggccctatagcagccaatcagatcccttgacaggccagacgcta
ccatccagtccttcaccagatctgaagtacagtcagccagttgtgtgtgagagcctgggc
acagtgagaagctccagtggtgaaggcagaggttgtctagccagtccagtccagcttgat
cccagccatacactcctggatacacaccatcacaaatcagcttctggcggtggctcctta
cctcctgtcagtactctcacttccctgcatggagtttcaggatcctctgctgcccctaca
ggactgatcatggcctccctgccaagtgtaatgagtctaggggactcctcactcttcata
ggtttgacatcctctcaaccacagacagacatcaacaatgtagggggaggttttactacc
cttcagccaatctcatttcagcagcatcttcacacctcacctcagcagccaacagtgcag
cagcttcagagtcacattggtccaagctccttcatggcaacaatgacacagttaccatgc
cacatgtacagcaaagcagacctgagctctttcccctcctccagtctcctgtcccaggct
atggtcatcgcagacagcaacagcattgggacactgactaacctcacagctgttcgacag
attctcacctcagatcctgaagctcactctgaaactcctattgaagaggagtctttacat
ctgcaatccacttcaccagagccagtgtcttcaggcagtttggatctctaccctcagacg
agtgaccctcatccttctcacctgctctcctctccacctggagatatagacccttacatc
cctacacatatggtctctcctgcacaatag
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