Carassius gibelio (silver crucian carp): 128018526
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Entry
128018526 CDS
T08819
Name
(RefSeq) small nuclear ribonucleoprotein Sm D3-like
KO
K11088
small nuclear ribonucleoprotein D3
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128018526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
128018526
03041 Spliceosome [BR:
cgib03041
]
128018526
03032 DNA replication proteins [BR:
cgib03032
]
128018526
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
128018526
Spliceosome [BR:
cgib03041
]
Complex A
U1 snRNP components
Sm proteins
128018526
U2 snRNP components
128018526
Complex B
U1 snRNP components
128018526
U4/U6.U5 tri-snRNP components
128018526
Complex C
U2 snRNP components
128018526
DNA replication proteins [BR:
cgib03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
128018526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
ATP-grasp_2
TSP9
Motif
Other DBs
NCBI-GeneID:
128018526
NCBI-ProteinID:
XP_052460047
LinkDB
All DBs
Position
A8:complement(13995069..13996284)
Genome browser
AA seq
128 aa
AA seq
DB search
MSIGVPIKVLHEAEGHIVTCETTSGEVYRGKLIEAEDNMNCQMANITVTYRDGRVSQLEL
VYIRGSKIRFLILPDMLKNAPMLKSMKNKNQAAGAGRGKAAILKAQVAARGRGRGGGPGR
GNVFQKRR
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcggtgtgcccatcaaagtccttcatgaagcagagggacacatcgtcacctgt
gagaccaccagcggggaggtttacaggggcaaactgatcgaggctgaggacaacatgaac
tgccagatggcaaacatcacagtcacatacagggatggccgtgtatctcagctggagctg
gtgtatattcgtggcagtaagatcaggttcctcatccttcccgacatgctgaaaaatgct
cctatgttaaagagtatgaagaacaaaaatcaggccgctggtgccggtcgaggaaaagcg
gctattctcaaagcccaagtggctgccagaggccgtggccgtgggggaggaccaggacga
gggaacgtgttccagaaaaggcgctag
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