Carassius gibelio (silver crucian carp): 128018547
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Entry
128018547 CDS
T08819
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A-like isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgib03036
]
128018547
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128018547
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
ERCC3_RAD25_C
CUE
HBS1_N
HHH_3
SpoVIF
Motif
Other DBs
NCBI-GeneID:
128018547
NCBI-ProteinID:
XP_052460082
LinkDB
All DBs
Position
A8:complement(14487973..14498287)
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AA seq
974 aa
AA seq
DB search
MSFFNLDRFRFQKDNVAESHCKSPGGSNSDKENQRAHQRKTDGRCASGKASRHALENVSA
DDKVVRTGKDATSVTNHQLSKEMEDKIIKLMEMFPQKNKKDLLEVVESTSTLDGAIAHCL
MVYGDDDSGRQKGKARYCEDADNDQPTKRRKIVHLDSESEEQEEDSDDEESQEPSRERQE
ALLKKLKKKLPDIEKEVLRDVLREHDWDYENALGSLLVFSSTDSSSPEDQRKQKSESSHS
KEKKDKSSQKPGSSSSLSRWLTAVPSPVPKVSSVSTPKTQNSTVSKSMTKNTSFKQKRHD
EWLLNDVSASEDEEEIDSDVESISDDLDSEDEDSISGNLQDKIIQFLQEASLDELSLISG
CSIKKAQKIISLRPFNTWKDVKGQFYKDNGLSIDLVHGCKVVLKERQVVKDLMGRCEKIS
KKMTKDVTQVIEAGMGSIKQPKILNSNFKLQPYQLIGLKWLILLHQHQLSGILADEMGLG
KTIQAISFLAHLYEKGIKGPHLITVPSSTLDNWVRELGLWCPSLKVLIYYGSVEDRRYLR
QDILSGLIDFNIIVSTYNLTIGNDNDRSLFRKLRLKYAVFDEGHMLKNMNSLRYRHLMAI
NAEHRLLLTGTPLQNNLLELMSLLNFIMPSMFSSSTSQISKMFSTKSSEEESSFHKKRVA
QAKLIMKPFILRRVKSEVLKQLPPKVENIEMCPMSDAQQKLYDKLFKRLKKTPNGDKREL
CNVMMQLRKMANHPLLHRQYYTSDKLAAMSKAMLKEPTHFDADPALIQEDMEVMSDFELH
SLCKQYSSIGSFQLKKELLLDSGKFALLTKTLSRLKEKGDKVVLFSQFTMMLDIVEVLLK
HLDHQFVRLDGSTPMAERIGLIDKYNTNPDIFVFLLSTRAGGQGINLASANTVILHDIDC
NPFNDKQAEDRCHRMGQTRTVQVIKLVSRDSIEACMLRVGQEKLKLEQDMTTDGDEDGAI
TEQMAELLKVSLGL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgagctttttcaacctagaccggttccgcttccaaaaggacaacgtagccgaaagtcac
tgtaaatcgccgggtggatcaaactcggataaggaaaatcaacgtgcccaccaaagaaag
acagatggtcgatgtgcatcaggcaaggcatcgagacatgctttagagaatgtttctgct
gatgacaaagttgtcaggacgggcaaggatgcaacatcagtgaccaatcaccagttgagc
aaggaaatggaggacaaaatcatcaaactaatggagatgttccctcagaagaacaagaaa
gatctattggaggtagttgaaagcaccagcacgctggatggtgctatagcacattgtttg
atggtttatggagacgacgattcaggcagacagaaaggcaaagcgagatattgtgaagat
gctgataacgatcagccaacaaagagaagaaaaattgtgcatttagattcagaatctgag
gagcaggaggaggattctgatgatgaggagagtcaagagccaagcagagagaggcaggag
gcgctgctgaagaagctgaaaaagaaactgcctgatattgaaaaagaggtcttgagggat
gtcctgagagagcatgactgggactatgagaatgccttggggtcactgcttgtgttttca
tcaacggattcaagttcaccagaggatcagagaaaacaaaagtcggaatcatctcactcc
aaggaaaaaaaggacaagagctcacaaaagcctggcagctcatctagtctgtcaagatgg
ctgacagcggtaccgtctcctgtgccaaaagtttctagtgtgtctactccaaaaacacaa
aactcaacagtcagcaaaagcatgaccaagaacacatcctttaaacaaaagaggcatgat
gaatggctgttaaatgatgtcagtgcctctgaggatgaagaggagattgacagtgatgtt
gagagtatctctgatgatctggactcagaggatgaggacagcatctctggcaatctccaa
gacaagatcattcagtttctccaagaggcttccctagatgagctgtctctaatatctggc
tgctcaatcaaaaaagcccagaagatcatttccctgaggcctttcaacacctggaaagat
gtgaaagggcagttctataaggataatggcctgtctatagacctggtacatggctgcaag
gttgtccttaaggagaggcaggtggttaaagaccttatgggaagatgtgagaagatttca
aagaaaatgactaaagatgttactcaggtcatagaagcaggcatgggctccatcaagcaa
cccaaaatcctgaacagcaattttaaactccagccatatcagctgatcggcttgaaatgg
ctgattcttctgcaccagcaccagctgagtggcatcctggcagatgaaatggggctgggt
aaaactattcaggccatctcatttctggctcatttgtatgaaaaaggaatcaagggccct
catcttattaccgtaccctcgtccaccctggataactgggttcgtgagctgggtctatgg
tgtcccagtcttaaagttcttatttactatgggtctgtggaagaccgcagatacttgcga
caagacatcctcagtggcttaattgatttcaacatcatagtatccacatacaatctcact
atagggaatgacaatgaccgcagtctgttccgcaagctgaggctgaagtatgcagtgttt
gatgagggccacatgctgaaaaatatgaactctctacgctaccgccacctcatggccatc
aatgctgagcacagattgctgctgacaggaacacctttgcagaacaacctgctggagctc
atgtccctcctgaacttcatcatgccctccatgttctccagcagcacctcacagatctcc
aaaatgttctctacgaagtcatcagaggaagaaagcagttttcataagaaaagagttgca
caggccaaacttatcatgaagccattcattctgagacgggtcaagagtgaggtgttgaaa
cagcttccaccaaaagtggagaatattgaaatgtgtcccatgagtgacgcccagcagaag
ctgtatgacaaacttttcaaaagactaaagaagactccgaatggagacaagcgggagctt
tgcaatgtgatgatgcagttgagaaagatggctaatcatccattgctgcaccgccagtac
tacaccagtgacaaattggctgccatgagtaaagccatgcttaaggagccgacacatttt
gatgcagaccctgcgctgatccaggaggacatggaggtgatgtctgattttgagctgcat
agtttatgtaagcagtacagctccatcggcagttttcagctgaagaaagagctcctctta
gactctgggaagtttgcacttctaaccaaaacactctccaggctcaaagaaaagggtgat
aaggttgtccttttcagtcagttcaccatgatgctggacattgtggaggttctgctcaaa
caccttgaccatcagtttgttcgtctggatggttctactcccatggcagagaggattggt
ctcattgacaaatacaatacaaaccctgacatttttgtgttcctcctgtcgacccgggct
ggggggcaggggatcaaccttgcctctgcaaacaccgtgatactgcatgacattgattgc
aatccattcaatgataaacaagcagaagatcgctgtcatcgaatggggcaaaccaggaca
gtgcaggtgatcaagctcgtcagcagagattcaattgaggcctgcatgctccgtgtggga
caggagaagctgaaactggaacaggacatgaccactgatggagatgaggacggtgctata
actgaacaaatggcagagctgctcaaagtctcactaggcctttga
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