Carassius gibelio (silver crucian carp): 128018573
Help
Entry
128018573 CDS
T08819
Name
(RefSeq) PR domain zinc finger protein 2-like
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib00310
Lysine degradation
cgib01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
128018573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
128018573
03036 Chromosome and associated proteins [BR:
cgib03036
]
128018573
Enzymes [BR:
cgib01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
128018573
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
128018573
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
128018573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_4
zf-C2H2
zf-C2H2_6
zf-C2H2_ZNF462_1st
zf-C2HE
zf-MYST
Motif
Other DBs
NCBI-GeneID:
128018573
NCBI-ProteinID:
XP_052460122
LinkDB
All DBs
Position
A8:complement(15823367..15831279)
Genome browser
AA seq
1492 aa
AA seq
DB search
MWKSDDIVEEERPSMPSEVFLQQPEVQDAQDEMALHSTSEPEGGEVEKGIKGETDVKMDC
KDKQNASQPVSQNLTNQKQACQTSETEHVGMIEQDYGTELPLNGTKGDLDPGSKPQGELP
CPHCERRITSCQGLQRHIQTHALSTCHTQRFKCSHCRRHFSTLFSRRRHEKRHDNRYRKT
DDLTGAPCTASQNMPDSAEPLRTTSQNPEPNKCTNAADGEQKDDKNSDVKSSYVCKYCKK
TFRSHTSLRRHQRRVHEHHLLPRGVYKKVKIIEEPEGQQLVEKAQDNHTAISQCAEDIDQ
EREYMVDISSNISENLSFYIDGKIVSTSAISNCEVIEMNSGSSAVIGLNAVIISPAQIAQ
ALKSETSTSSFTSDLSGQSSARRRTSTPPLLPQIKTELESESISSTSSSSLSSLTRCPTS
GAPLVNAHLPQCIETVAFHKEKTIYLSPQLKQIVQNQDRSKPAFARITDDHKLGPPISLT
VLPETTTRFKRRTTSPPSSPQQTPDVNIKKQDQDSTNAGKSKLESHGLSLLANEEPEPLN
SPSNSSDGAPIQEPILPLDCSVSRTGGNSCNQQPLDLSNSVVKRESSNALAESILDLSIS
GKSLDCDLPGVYLSQPGLRKSKPNSSMLQKVLMNEYGGEDIPSVEGPATAGVLSVPDITN
LVVVAVSDAGPPKPEKFLFELALPPASISPTPPLLASVSIHTATPVHSPQSSPSPPTFVS
FLSTPTVEPTQDVQTLHSAFVVSDNEPPTGCVEECADLSQGDSKVTIPDWGSSAPGGLET
LIHAVPSLNLQSSHWVADPAVCELAQRTLVVDSVLASDAQIFSPSLPVNQSNVKSLAFPP
NTVVIEYTVAVQSTENILPALQHNSVQCLSDQISGDALQQDLDVPSEPQFLSPETTLLPE
TSTQLASTEQSKSSTDGTLTLTASTNVVEAESNENGQENVQSSDFSKQENKAEEESSPLH
PFCKNFMCNVCEQSFQSMKILSQHVGEHSKEWPFKCEFCVQLFESDTGLLEHRSSYHGIG
KIYVCKTCSKEFAFLCNLEQHQRDLHPGQESSHTEAVHGKLRPENHNSPKTDMIDPGLPI
AEIKQESDNTTSEAEKDALDNSSQELFTTIKIMASGGVKSKGQVVRLGINQHYPSFKPPP
FPYHNRTPTGTTAASATNFTTHNIPQTFSTAIRCTKCGKSFDNMPELHKHILACANASDK
KRYTPKKNPIPLKQFAKVQNGVLSPAKIVNSKQNLSQKDGQPKKLNFHESPIKIKMRILN
KKKPQLVQRGRPAGGRKAFAQDDLGIFACPHCRREFTYNASLKKHVAFSCPMRPTSRNSK
KSTLSIVSAQENNGSLRRQLANLSAKPQGSDHGPKTITKNQIIKQNAAVETTHDFRLKRS
TVLSTSVVQSSKKSKPISKSGFMPQLASKQIVLSPVAQVNSQEPGVRVHVLGRKLEQRVG
DIKIQPRRDIRLSLRLRERVGGPITRSVQQSSTTATDSDNIIMRPVVLQLKK
NT seq
4479 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaatcagatgacattgtggaagaggagaggcctagtatgccatcagaggttttt
ctccagcagcccgaggttcaagatgcccaagatgaaatggcacttcatagcacctcggag
ccagaagggggagaggtagaaaaaggaataaaaggagaaacagatgtgaagatggactgc
aaagacaaacagaatgcaagccagcctgtgtcccaaaatctaactaatcaaaagcaagcc
tgtcagacaagtgagactgagcatgttggaatgatagaacaggattatgggactgagtta
cctttaaatggtactaagggtgaccttgacccgggtagtaaaccccaaggtgaattaccc
tgtcctcactgtgagagaaggattacgagttgtcaaggcctacagcgtcacatacaaaca
catgctctttcaacctgccacacacaacggtttaaatgcagtcactgcagaagacatttc
agtacattgtttagtcgtcggaggcatgagaaaagacatgataatagatataggaagaca
gatgatctgacaggggccccttgcactgccagtcagaatatgcctgacagtgctgaacct
ctgagaacaacatcacagaacccagagccaaacaaatgtactaatgcagctgatggtgaa
caaaaggatgataaaaacagtgatgtcaaatcctcatatgtctgcaagtactgcaaaaaa
acatttaggtctcatactagtctaaggagacatcaacgcagggtccatgagcatcatctt
cttcctagaggagtttataagaaggtcaaaatcattgaagaacctgaaggacagcagctt
gttgagaaggcacaagacaaccatactgctatctcacagtgtgcagaggacattgatcag
gaaagggagtacatggttgacatctccagtaacatttcagagaatctcagtttctacata
gatgggaaaattgtctcaacaagtgccataagtaactgcgaggtgattgagatgaactct
ggcagttctgctgtgataggattaaatgctgttataataagtccagctcaaattgcacaa
gctcttaaatcagaaaccagtactagcagttttacctctgacctgtctgggcagtcctca
gccagacgtaggacttctaccccacctttactcccacaaataaaaacggaattagagtct
gaatccatctcgagtacctcctcgtcttccttgtcatccttgacacggtgccctacatct
ggagctccgctggtcaacgctcatttacctcagtgcattgagacagttgcctttcacaag
gaaaaaacaatctatctgtctcctcaactcaagcagattgttcagaatcaggatcgcagt
aaaccagcatttgcacggattaccgatgaccacaaactgggtcctcccatatccctaact
gttttacctgaaacaacaactagatttaagagaaggacaacctcccctcccagctcacca
cagcaaacccctgatgtgaatataaaaaagcaagatcaggattcgacaaatgccgggaag
tcaaagttggagagccatgggttgagcctcttggccaatgaagaacctgagcctttgaat
tcacccagtaacagctctgatggagctccaatccaggaaccaatcttaccgttggactgc
tctgtatcaagaactggtggaaactcctgtaatcaacagccactggacctctcaaattct
gtggttaagcgagagagcagcaatgccttagcagagtccattctggacttaagtattagt
ggaaagagtttagactgtgacttacctggagtctacctcagtcagcctggtttaaggaag
agtaagcctaactctagtatgcttcagaaggtgcttatgaatgagtatggtggggaagac
attccttcagttgaaggtccagctactgcaggtgtcctcagcgtccctgacataacaaat
cttgtagtcgtggcagtgtctgatgcaggtccaccaaaacctgaaaagtttttgttcgag
ttggctcttcctcctgcttcaatcagtccaacccctccattgctcgcttctgtcagtatc
catacagctaccccagtccattcacctcagagttcaccttcacctccaacttttgtatcc
tttctctcgactcccacagtggaacccactcaggacgttcagactcttcattcagctttc
gtggtatctgacaatgaaccacccacagggtgtgtagaagagtgtgctgatctttcacag
ggagattcaaaagttacaatccctgactgggggtcctctgctcctggaggtctggaaacc
cttatacatgctgtcccttcactaaatttacaaagctctcactgggttgctgatcctgct
gtatgtgaactagctcaaaggacattggttgtcgactctgtgttagcttctgatgcacag
atattttctccatctctgcctgttaaccagtccaacgtcaagtctttggcttttcctcca
aacactgttgttatagagtatacagttgcagtgcaatctacagaaaatattcttccagct
ctccagcataattcggttcaatgtctctcagatcaaatttctggcgatgcattacagcaa
gaccttgatgtcccatctgagccacaatttctcagtcctgaaaccaccctactacctgaa
acctccacacagttggcatctacagagcagtcaaaaagttctacagatggtacattgact
ctgactgcttccaccaatgttgttgaggcagagagcaatgagaatggacaagaaaatgtc
cagtcctctgatttttccaagcaggaaaacaaagctgaagaagaatcatctcccttgcat
cctttttgcaagaacttcatgtgcaatgtttgtgaacagtctttccagtccatgaagatt
cttagtcaacatgtaggtgagcactcaaaggagtggccctttaaatgtgaattttgtgtg
cagttgtttgagagtgacacaggattgctggagcaccgatccagttatcatggcattggt
aaaatttatgtttgtaaaacatgttccaaggaatttgcttttctctgtaacttggaacag
catcagcgagatctccatcctggtcaagagtcctcacacaccgaagcagtgcatggcaag
ttaagacctgaaaaccacaacagtcccaaaactgacatgattgatccaggcctcccaatc
gctgaaattaagcaagaatcggacaacacaacctcagaagcagagaaggatgccttggac
aacagttctcaggagctgttcacaacaataaaaatcatggcatcaggaggagtcaaatca
aaaggccaagttgtacgtctaggcattaaccaacattacccaagttttaaaccgcctcct
tttccataccacaatcgcacaccaactgggacaacagcagcatcggccaccaactttacc
acccacaacatccctcagaccttcagcacagccattcgttgcaccaagtgcggtaagagc
tttgacaacatgcctgaactgcacaagcacatcttagcttgtgctaatgctagtgacaag
aagcgatacactcctaaaaagaaccctataccacttaagcagtttgcaaaagtgcaaaat
ggggtcttatcacctgcaaagattgttaatagtaagcagaatctctctcaaaaggatgga
caaccaaaaaaattgaactttcacgaatcaccaattaagataaaaatgcgtatcctgaat
aagaagaaacctcagctggtgcaaaggggtagacctgctgggggaagaaaggcttttgct
caggatgacctgggcatttttgcatgtcctcactgtaggagagagtttacttacaatgcc
agtttaaagaaacacgtagcttttagctgccctatgagaccaaccagtagaaactccaaa
aaaagcacactcagcattgtttcagcacaggagaacaacgggagccttcgcagacaactt
gcaaatttgagcgcaaagccacaagggtcagaccacgggccaaaaacaataacaaagaat
cagatcattaagcaaaatgcagcagttgagaccacacatgattttaggcttaaaagatct
acagtcctatcaacatctgtggttcagtctagtaaaaaaagcaagcctatttcaaagagt
ggctttatgccacagctggcttcaaaacagatagttctctcacctgttgctcaggtaaac
tctcaggagccaggtgttcgagtacatgtcttaggaagaaaattggagcagagagtgggt
gatataaagatacagcccagaagagatatccgtttgtctctgaggttgagagagagagta
ggaggacccattactcgcagtgtgcagcagtccagcaccacagcaacagacagtgacaac
atcatcatgcgccctgtcgttcttcaactcaagaaatga
DBGET
integrated database retrieval system
