Carassius gibelio (silver crucian carp): 128018675
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Entry
128018675 CDS
T08819
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-1 isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
128018675
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128018675
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128018675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
Torus
zf-CCCH
zf_CCCH_4
zf-RING_2
zf-C3HC4
zf-CCCH_2
zf-RING_5
zf-C3HC4_2
zf-rbx1
RING_XB3-XBAT31
zf-RING_UBOX
zf-C3HC4_4
zf-RING_11
IBR_1
OapC
Motif
Other DBs
NCBI-GeneID:
128018675
NCBI-ProteinID:
XP_052460307
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All DBs
Position
A8:complement(17118628..17122033)
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AA seq
424 aa
AA seq
DB search
MGKPRPTIIKVRMSLAIHRAKSYKRKMEREAQSSKGPGNNSAVCRQFINGSCRYGPSCYY
LHEFPADPSFQVQCRYFQKGGCWFGDRCRYLHVPRAGDGSSGSSRRGSAPAGLPSALAGR
SLADRRGSEPSLLPPRGAHSLNRRGSEPLVTSMSVMQQNFECLTTGIAEEEEFVVMDNAP
PQQGAIRPLQQICATDSSSSHNYSSSAFVPGATPAVVQKITVSEAETQVNGSPERLNQGG
AAVSTGQEHSRAFDQSKDVACGICMDKISEKSTTLDRRYGILPNCNHAFCIGCIVTWRKT
KDFQEDVIKGCPQCRVKSSFYVPSKHWVCDGEEKASLIAAFKERSSKLKCTFFMRHGCCP
FKSECIYSHDMPSNHTHRRRRSASRDTAEMLEDLGIDGIQLWSYIFALTLLDEDDEDLLD
FLDD
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagccccgcccaacaattataaaagtgcgcatgtcattagctatccatcgggca
aagagttacaagcgcaagatggaaagggaagcacaatcatccaaaggcccaggaaacaac
agtgcggtttgtaggcagttcatcaatggatcttgtcgctatggtccgagctgttactat
ctgcacgagtttccagcagatccttcgtttcaggttcagtgtagatacttccagaaaggt
ggctgctggtttggtgaccgttgcaggtatctccatgttcctcgagcgggtgatggttct
tcagggagcagcagacgtggttcagcacctgcagggctcccctctgcgctggcgggccgt
tctctggctgaccgcagaggatctgagccctctcttctcccacctcgaggagcccacagt
ctgaatcgcaggggttcagagcctctggtcacaagtatgagtgtaatgcagcagaacttc
gaatgcttgactacaggcattgcagaggaggaagagtttgtggttatggacaatgcacct
ccccagcaaggtgcaattagaccactacaacaaatctgtgctacagactccagttcttca
cataactacagctcatcagcctttgtgccgggcgcaacacctgctgtagtccaaaagata
accgtatctgaagctgaaacgcaggtgaatggttcaccagagagactaaatcagggtggc
gctgcagtatcgacggggcaagagcattcaagggcctttgaccaaagcaaagatgtggcc
tgtggcatctgcatggacaagatttcagagaaatccaccactctggatcggcgttatggc
atcctacccaactgcaatcacgctttctgcatcggctgcattgttacctggcgaaaaaca
aaggacttccaggaggatgtcatcaagggctgtccacagtgcagagtgaaatcctccttc
tacgttcccagcaagcattgggtctgtgatggggaggaaaaggcatcactgatagccgct
ttcaaagaaagaagcagtaagctaaagtgcactttcttcatgcgtcatggatgctgcccc
tttaaatcagagtgtatctacagccatgacatgccctctaatcatacacaccgtcgcagg
cgctcagcatccagggacacagctgagatgttggaggatttgggcattgatggcatccaa
ctttggagctacatctttgccctaactttgctggatgaagacgatgaagaccttctggat
tttcttgatgattaa
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