Carassius gibelio (silver crucian carp): 128018787
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Entry
128018787 CDS
T08819
Name
(RefSeq) nuclear receptor ROR-beta-like isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
128018787
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cgib03310
]
128018787
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
128018787
Nuclear receptors [BR:
cgib03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
128018787
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
DUF3452
Motif
Other DBs
NCBI-GeneID:
128018787
NCBI-ProteinID:
XP_052460503
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All DBs
Position
A8:19480891..19494512
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AA seq
491 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKKKNIIQLCNSMRGFFRRSQQNNAMYSCSR
QRNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQERTG
GLGNGVPSHVGDEVGENSSSQGRTYSRGSSTTLSDLDDITTLPDGLFFDLPLTPEEAADY
CSLELLGGSGGSSESSQSSPEQNRQEFSDTTRIKHEYQTLHETGLYTRSLLNPPEGCSLM
ELERITQNVVKSHIETSQYSTEELKRFAWTLYTPEEMRVFQNKSTEVMWQQCAEYITNAI
QYVVEFAKRISGFLDLCQNDQIILLKAGCLDVLLIRMCRAYNPINNTLLFDGKFASPHLF
KALGCDDLVGAVFEMAKTLSRLQLSEEEMALFTATVLLSPDRPWLTDAQKVQKLQEKVYV
ALQHCLHKSGAPEEKLAKMVSKLPMMKSICNLHIDKLEFFRLLHPETAYSFPALYREVFC
SEISFPDSTEG
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagagcacaaatcgaagtaatcccatgcaagatttgcggggacaagtcatcgggcatc
cactatggcgtgatcacttgtgaaggctgcaagaaaaagaacatcatacagctttgtaac
agcatgaggggcttcttccgccgaagtcagcagaacaatgcgatgtactcctgctccagg
cagaggaactgccttattgaccgaaccaatcgcaaccgctgccagcactgccgcctgcag
aaatgtctggcacttggcatgagccgtgatgcggtgaagtttggacgcatgtcaaaaaag
cagcgtgacagcctttatgccgaggttcagaagcaccagcagtcccaggagcggacaggg
ggcttaggcaatggtgtacccagccatgttggtgacgaggtcggggagaacagcagcagc
cagggccggacctacagccggggctccagcaccacactaagtgacctggatgacataacc
acgctaccagacggtctcttctttgatctgccgctcacaccggaggaagctgctgactac
tgcagcctagagctgctgggaggaagcggtgggagcagtgagtcctcccagagttctcct
gagcagaacagacaggagtttagtgacacaacacggatcaaacacgagtaccagaccctg
cacgagacgggactttacactcgctcattacttaacccacctgaaggctgttccttgatg
gaactcgaacggattacacagaatgtggtaaaatcccacatcgagacaagtcagtatagc
acagaagaactgaaaagatttgcctggacgctctacacacctgaggagatgcgtgtcttc
caaaacaagtccacagaggtaatgtggcagcagtgtgctgagtacatcacgaacgccatc
cagtatgtggtggagtttgccaagcgcatctctggattcctggacttgtgtcaaaatgac
cagattatccttctcaaagcaggctgcctggacgtgctgttgatccgaatgtgtcgggcc
tacaaccccatcaacaacacactgttgttcgatggaaagtttgcaagcccacatctcttt
aaagcgctcggatgtgatgatctagtgggtgctgtgtttgagatggctaaaaccctgagt
cggctacagctgtctgaagaggagatggctctgtttaccgccactgtgcttctgtctcca
gacagaccgtggttgacagatgctcagaaggtgcagaaacttcaggagaaggtctatgtt
gcgttacaacactgtcttcataaaagcggtgcccctgaggagaaactggcaaagatggtg
tccaagttgcccatgatgaagtcaatttgcaacctccatattgataagctggagtttttc
cgtctccttcacccagaaacggcctacagcttccctgctctctacagagaggttttctgc
agcgagatctccttcccagactccaccgagggctaa
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