KEGG   Carassius gibelio (silver crucian carp): 128018923
Entry
128018923         CDS       T08819                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    128018923
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cgib03041]
    128018923
   03400 DNA repair and recombination proteins [BR:cgib03400]
    128018923
Spliceosome [BR:cgib03041]
 Complex B
  Other components
   Prp19 complex
    128018923
 Complex C
   Prp19-CDC5 complex
    128018923
DNA repair and recombination proteins [BR:cgib03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    128018923
SSDB
Motif
Pfam: BCAS2 Cep57_CLD Sterile Dsc3_C THOC7 Tup_N
Other DBs
NCBI-GeneID: 128018923
NCBI-ProteinID: XP_052460763
LinkDB
Position
A8:22975118..22978743
AA seq 225 aa
MAGPASVAGDVFVDALPYFDQGYDAPGVREAAAALVEEETRRYRPTKNYLSYLPTPDFST
FETEIMRNEFERLAARQPMELLSMKRYELPAPSSGQKNDITAWQDCVNNSMAQLEHQAVR
IENLELMAQYGTNAWKVSNDNLALMIENAQKELQKVRKQIQDLNWQRKNDQMAGGAKLRE
LESNWVSLVSKNYEIERAIIQLENEVAQTKQQQGDENKENIRQDF
NT seq 678 nt   +upstreamnt  +downstreamnt
atggcaggaccggcttcagtcgctggtgatgtttttgttgatgctctgccttatttcgac
cagggttatgatgctccaggggtcagagaagccgcagctgctttggtggaagaagagacg
aggcgatacagaccaaccaagaactatttgagctacctgcccacaccagatttctctact
tttgagacagagatcatgaggaatgagtttgagagactggctgctcgtcaacccatggag
ctgctcagtatgaagagatatgagcttcctgctccatcgtctgggcagaagaatgatatc
acagcatggcaggactgtgtcaataactctatggcccagctggagcaccaggcagtgcgc
attgagaaccttgagctcatggcccagtatggaactaatgcttggaaggtgtctaatgat
aacttggccttaatgattgaaaatgcccaaaaggaactgcagaaggttagaaagcagata
caggacctgaactggcagcgcaaaaacgatcagatggctggaggagccaaactacgagaa
cttgagtcaaactgggtgtctcttgttagtaagaactatgagattgagcgtgccatcatt
cagctggagaatgaagtggcacagacgaaacagcaacagggtgatgagaacaaagagaat
attagacaggacttttaa

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