Carassius gibelio (silver crucian carp): 128018925
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Entry
128018925 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33-like isoform X1
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cgib01001
]
128018925
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
128018925
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128018925
Protein kinases [BR:
cgib01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
128018925
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128018925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-B_box_Trim66
zf-RING_UBOX
zf-C3HC4
PHD-1st_NSD
Motif
Other DBs
NCBI-GeneID:
128018925
NCBI-ProteinID:
XP_052460765
LinkDB
All DBs
Position
A8:22986798..23011732
Genome browser
AA seq
1158 aa
AA seq
DB search
MADNKSQDCTERSADMEVEASGTDDNGDGSSKDPEAVISIDSVPKEGAEELKSQETDPQA
LTTSSSSCSGGGATDGAPNAESTEPPPSSSSSSADSTAAGASPALVNEMSPPPPASSTSS
SSTPATPINLLDTCAVCKQSLQNRDCEPKLLPCLHSFCLKCIPQPRRKITVPVQGPHGQD
TRVVNVMRCTVCHQEYKQIDMVDNYFVKDTSEATSTSVENSTQVCTSCEDNASAIGFCVE
CGEWLCKTCIEAHQRVKFTKDHKIRKKEEVSSESVGTSGQRPVFCPVHKQEALKLFCETC
DTLTCRDCQLLEHKEHRYQFLEEAFQNQKGIIETFMTKLQEKRNFVEFSASQLQNRIKEV
AETHKKVEHEIKIAVFTLINEINKKGKSLLQQLESVTKERSMKLLNQQRDISILAQQVIH
VLNFTNWAISSGSSTALLYSKRLITYQLRFIMKARVDPVPQSNGAVRFFCDPTFWAKNVV
NLGNLVIEKVPHTAPPPQMMGNQQISPSHSHPGKHSGQINLAQLRLQHMQQAAIAQKHQH
QHQQQQQQQQQQQQQHQQQIQQQMRIASQMSQHPRQGGPPQITGIQQPPPRLISMQALQR
GGVNGSSHMYPPHHLRMVSGQNRMPSAQPRLNGQPYPMMQPQLQRQHSNPGHAGPFPVAS
LHNISAANPTSPTSASMANAHIHRGPTSPIVGPIELIPSVTNPENLPCLPDIPPIQLEDA
GSSTLDNILSRYISASSYPAVGPTNPSPGPSTHSPGSSGLSNSHTPARPSSTSSTGSRGS
CGSAGRPGTGNTTVDQVKVKQEPGVEEECSYSGANVKTESCKDGRRSACMMSSPEGSVTP
PLPVLGSVSTGSVQDILRTLGENVKSEPQSNQRSSCTNPNSSAPLTNGTTESNGSQQVST
ANANNQTTVGKEDDPNEDWCAVCQNGGELLCCDRCPKVFHMTCHIPTLKSSPSGDWMCTF
CRSLINPEMEYNSDDDPPSKKDKSEMAMSLEDQRRCERLLLHVFCHELSTEFQEPVPITV
PNYYKIIKQPMDLTMVKRKLQRKHHLHYKSPKEFVFDVRLVFSNCAKFNEMSRIIQVYDE
EKQSNVQADSEVAEAGKAVSLHFEEKLLEIFPDQTFPVVLEKEVQAEADKDSEDSDDDFV
HPKRKRLKVDTEKLSHFK
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacaaaagccaagattgtacggagcgctccgcagatatggaggtagaggct
tcgggaacagatgacaacggagacggcagctcaaaggacccagaagccgtcatttcaatc
gactcggtcccgaaggaaggagcagaggagctcaagtctcaagagaccgatccccaagcg
ctgacgacatcaagcagcagctgtagcggcggcggagctacagacggagccccaaatgcc
gagagcaccgagccgccgccgtcgtcctcctcctcctcagcggacagcaccgctgctggc
gcatcacccgctttggttaacgaaatgtcgcctcctccaccagcatcctcaacctcctcc
tcttcaacccctgccaccccgataaacctactggatacgtgcgctgtgtgtaaacagagt
ctccagaaccgcgactgtgaacccaaactcctgccctgcctgcactccttctgcctaaag
tgcatcccgcagccgaggcgaaagatcaccgtcccggtgcaagggccccacggacaggac
actcgtgttgtgaacgtcatgcgttgcacggtgtgccatcaggagtacaaacagattgac
atggtggacaattactttgtcaaggacacttcagaggccacaagcacatcggttgagaac
tctacacaggtttgcaccagctgtgaagataatgccagtgctattggattctgcgttgaa
tgtggggagtggctctgtaaaacctgcattgaagctcatcaacgggtcaaattcacgaag
gaccataaaatacgaaaaaaagaggaagtatcttctgaatcggttgggacatcaggccag
agacctgtcttctgtccggtacacaaacaagaggccctcaagctcttctgtgagacatgt
gacactctaacctgcagagactgccagctacttgaacacaaagaacacaggtaccagttt
cttgaagaagcctttcaaaaccagaaaggcatcattgagacatttatgactaagttgcaa
gagaaaagaaactttgtggagttttctgcatctcagttgcaaaacagaataaaagaagtt
gccgagacgcataagaaggtggaacatgaaataaaaatagcagtctttactctcatcaat
gaaatcaacaagaaaggcaaatctctgctgcagcagttggagagtgtgactaaagagagg
agtatgaagctgctcaaccaacagagggacatcagcatcctggcccagcaggtcatccat
gtgctcaacttcaccaactgggccatcagcagtggaagcagcacagccctgctctacagc
aagagactgatcacataccagctgcgtttcattatgaaggcccgtgtggacccagtacct
caaagtaacggagcagtccgcttcttctgcgaccccaccttctgggccaagaatgtggtt
aacctcggcaatctggttattgaaaaagtgccacatactgctcctcctccccaaatgatg
ggcaatcagcagatctctcccagtcacagccaccccggtaagcactcaggacagatcaac
ctggcccagctgaggttgcagcacatgcagcaggctgcaattgctcagaagcaccaacac
caacaccaacagcagcagcagcagcaacaacaacaacagcagcaacatcagcaacaaatt
cagcagcagatgcgcatcgcctcacagatgtcccagcatcccagacaaggagggccacca
cagataactggtatacagcaaccgccaccaaggctcattagtatgcaggccctccagagg
ggtggggttaatggctcctcccacatgtatccacctcatcacctgcggatggtatcaggg
cagaaccgcatgccttcggcgcagccccgactcaacgggcaaccgtatcctatgatgcag
cctcaattacagagacagcactctaatccagggcatgctgggcctttccctgtggcgtcg
ctacacaacattagcgctgccaaccccaccagtcccaccagtgccagtatggccaatgcc
cacattcaccgtggccccactagtcctattgtcggccccatagagctcataccatcagtc
accaaccctgaaaacttgccctgcctgcctgacatccctcccattcagcttgaagatgcc
ggctcgagcacactggataacatcctcagtcgatatatttctgctagttcatatcctgct
gtcggccccaccaatccctccccgggaccttcaacgcattctccaggatcatcaggttta
tctaattctcacactccagctcgtccatccagcacgtcaagcactggcagtcggggcagt
tgtgggtcagctggtagacctggaacggggaacacgaccgtggaccaggtgaaggtcaaa
caggaaccgggagttgaggaagaatgtagctattctggagcaaacgtcaaaacagaaagt
tgtaaagatggcagacggagcgcttgcatgatgagcagtccagaaggaagcgtaactccc
cctcttcctgtcctcggctctgtgtccaccggttcagtccaggacattttaagaacactt
ggtgaaaatgttaaatctgaaccacagagcaatcagcgctcgtcctgtacgaacccaaac
tccagcgcacctctaaccaatgggaccaccgagtcgaatggtagtcagcaggtgagcacc
gctaacgccaacaaccagaccacggtaggaaaagaagatgacccgaacgaggactggtgt
gccgtgtgtcagaatggaggagaactgctgtgctgtgatcgctgtcctaaagtcttccac
atgacctgccatatcccaacactcaaatcttctcccagtggagattggatgtgcaccttc
tgcagaagtctcataaatccagagatggaatacaactctgatgacgatccacccagtaag
aaggacaagagtgagatggcaatgagtctggaggaccagagacgttgcgagcgcttgctg
ctgcatgtgttttgtcatgagctcagtacagagttccaagagcctgttcctataacggta
cccaattactataaaataataaagcagccgatggatttgaccatggtaaaacggaaactg
cagcgcaaacatcatctgcattacaagagccctaaagagtttgtgttcgacgtacgcctg
gtctttagcaactgtgccaaatttaatgagatgtctcgaataatccaggtttatgatgag
gagaaacagagtaatgttcaggccgactcggaagtggcagaggcggggaaagccgtgagt
ctgcatttcgaggagaaactgctggagatttttcccgaccagacgttcccagtagtcttg
gagaaggaggtacaagcggaggccgataaggattcagaagactctgacgatgacttcgta
catccgaaacgcaaacgcttaaaagtggacaccgagaagctgtcgcacttcaagtga
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integrated database retrieval system
