Carassius gibelio (silver crucian carp): 128019012
Help
Entry
128019012 CDS
T08819
Name
(RefSeq) DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
128019012
Enzymes [BR:
cgib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128019012
Spliceosome [BR:
cgib03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
128019012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
128019012
NCBI-ProteinID:
XP_052460910
LinkDB
All DBs
Position
A1:35487351..35493715
Genome browser
AA seq
427 aa
AA seq
DB search
MAENDVDNELLDYEEDEEPQTIVDSAVPAGKKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMSSVKCAVFFGGLSIKKDEEVLKKSCPHIVVGTPGRILALIR
NKTLNLKNVKHFVLDECDKMLEQLDMRRDVQDIFRLTPHEKQCMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVPRCV
ALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDETDAKILNDVQDRFEVNVAELPEEIDIS
TYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaacgatgttgataatgagctgttggactacgaggaagacgaggagccccaa
accattgtggacagcgcagtcccagccggcaagaaggaggtgaaaggctcctatgtctcc
attcacagctccggcttccgcgatttcctcttgaaaccagagctgctccgtgcaatcgtt
gactgtggctttgagcatccttctgaggtccagcatgagtgcattccacaagccatcctg
ggtatggacatcctgtgccaggcaaagtctggaatgggaaaaaccgccgtgtttgtgctc
gccacactccaacagatcgagccagtggatggccaggtttctgtgctggttatgtgccac
acacgtgaactagccttccagatcagtaaagagtacgagcgcttctccaagtacatgtcc
agcgttaagtgtgcggtcttcttcggtggtttgtccataaagaaggatgaggaagtgctg
aagaagagctgccctcacattgtggtgggaacaccagggaggatccttgccctcattcgc
aacaagaccttgaacctcaaaaatgtcaaacactttgtgttggatgaatgtgacaagatg
ctggagcagctggatatgagacgggatgtccaggatatcttcagactgacccctcatgag
aagcagtgcatgatgttcagcgccacattaagcaaagagatcagaccggtctgtcgcaaa
ttcatgcaagatccgatggaggtgtttgtcgatgacgagactaagcttaccctgcatgga
cttcagcaatactacgtcaaactaaaggacagcgaaaagaaccgcaaactgtttgacctg
cttgacgttctcgagttcaaccaggtggtgatatttgtcaagtccgttccgcgatgcgtg
gctctctctcagctgctggttgaacagaatttcccagccattgcgatccacaggggaatg
gctcaggaagaaagattgtcccggtaccaacagtttaaagattttcaacggcggatcctg
gtggctactaatctgtttggtcgtgggatggatatcgagcgtgttaatatcgttttcaat
tatgacatgcctgaagattcagacacgtacttacacagggttgctcgtgctggtaggttt
ggcacaaaaggattggccgtcacctttgtatcagatgagacggatgcaaagatcctgaat
gatgtgcaggaccgttttgaagtcaacgtcgccgagttgcccgaggaaatcgatatctcc
acctacattgagcagtccagatga
DBGET
integrated database retrieval system
