Carassius gibelio (silver crucian carp): 128019054
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Entry
128019054 CDS
T08819
Name
(RefSeq) DNA polymerase beta-like
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
128019054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgib03400
]
128019054
Enzymes [BR:
cgib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
128019054
DNA repair and recombination proteins [BR:
cgib03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
128019054
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
128019054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
HHH_8
DNA_pol_B_thumb
HHH_5
NTP_transf_2
HHH_2
Cdd1
Motif
Other DBs
NCBI-GeneID:
128019054
NCBI-ProteinID:
XP_052460969
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All DBs
Position
A8:complement(26518395..26522748)
Genome browser
AA seq
336 aa
AA seq
DB search
MSKRKAPQETLNEGITDFLIELANYERNVNRAIHKYNAYRKAASVIAKYPQKIKSGTEAK
KLDGVGAKIAEKIDEFLATGKLRKLEKIRSDDTSSSINFLTRVTGIGPAAARKFYDEGVR
NLDDLKKIEHKLNHHQQIGLKYFEEFEKRIPRAEMQKMEALILKELDVVDPEYIGTICGS
YRRGAESSGDIDILLTHPDFTSQSEKQPKLLHAVVDHLESVGFITDTLSKGDTKFMGVCQ
LKKEEEDEEEYLHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTINEYTIR
PVGVTGVAGEPLLVDSEKDIFDYIQWKYKEPKERSE
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaggaaagcgccacaggaaactctgaacgaaggaatcacagattttctcata
gagttggccaattatgagagaaatgtcaacagagccatccataaatacaatgcttacaga
aaagcagcatctgtgatcgccaaataccctcaaaagatcaaaagtggaaccgaagcaaag
aaactggatggagttggtgcaaagatagctgagaaaatcgatgagtttttagcgacagga
aagctgcgcaagctggagaagattcgcagtgatgacacaagctcctccatcaacttctta
actcgagtgactgggatcggtcctgctgcggccaggaaattttacgatgaaggcgtcagg
aacttagacgatctgaagaagatcgaacacaaactgaaccatcatcagcagatcgggtta
aagtactttgaggagtttgagaagagaatccctcgtgcagaaatgcagaagatggaggct
ctgatactgaaggagctggatgtggtggaccccgagtacatcggcaccatctgcggcagc
tacagacgaggagcagagtcgagtggtgatattgatatactcctgacccatccggacttc
acctctcagtctgagaaacagcccaaactccttcatgccgtcgtggatcatctggagtcc
gtcggcttcattaccgacacactttctaaaggagacactaagtttatgggtgtgtgtcag
ctgaagaaagaagaggaagatgaagaagagtatttgcaccgccgtattgacatcaggctt
atcccgaaggatcagtattactgcggtgtgctgtacttcaccggcagtgacatattcaac
aagaacatgaggactcatgcgctggagaaaggcttcactatcaacgaatacaccatccgt
cccgtgggtgtcaccggtgttgctggagagcctctgctggtggacagtgagaaggacatc
tttgactacatccagtggaaatacaaggaaccgaaggagcgcagcgagtga
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integrated database retrieval system