KEGG   Carassius gibelio (silver crucian carp): 128019075
Entry
128019075         CDS       T08819                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
cgib  Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cgib03041]
    128019075
Spliceosome [BR:cgib03041]
 Complex B
  Other components
   Complex B specific factors
    128019075
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st LisH_TPL ANAPC4_WD40 Beta-prop_EML NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_Vps41 Beta-prop_VPS8 WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 Beta-prop_NWD2_C Ge1_WD40 Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 Beta-prop_EIPR1 Beta-prop_NOL10_N Beta-prop_SCAP WD40_RFWD3 Beta-prop_LRRK2 Beta-prop_IP5PC_F PROPPIN Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd Beta-prop_DCAF12 VPS8_N LisH LisH_PAC1 PALB2_WD40 LisH_WDR26 WD40_like
Other DBs
NCBI-GeneID: 128019075
NCBI-ProteinID: XP_052461012
LinkDB
Position
A1:35593108..35603292
AA seq 539 aa
MDLEVESADVIRLIMQYLKENNLHRTLAMLQEETAVSLHTVDSIDSFISDITNGQWDIVL
LAIQYLKLPDKLLIELYEQIVLELIELGELGAAQCLLKQTDPMIMLKHTQPERYSHLETL
LSKPYFDSQEAYPVGSSKEKRRLAIAQAFAGEVCLVPPSRLMALLGQGRICEGALYRLQE
TKALRQFGSLAMLSLKWQQHQGLLPPGMSLELFRGKGALKDMEEERFPTQLSRLIKFGPK
SHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDSFMMMDDAVLCLAVSH
DSDMIASGAQDGKIQVWRILNGTCLNRIERAHDKAVTCVCFNKDSSQLLSGSFDQTIRLH
GLKSGKMLKEFRGHTAHINDVIFSHDVQHVISASADGTVKVWSMKAVDCTHTIKTPDIPD
GTDITVNNVVLVPKTPEHFVVCNRTNTVVVTNIHGQVMRSFCSGVREGADFVCCTLSPRG
EWIYCVGEDYVLYCFSTITGKLERTLTVHEKDVVGITHHPHQNLIATYSEDGLLKLWKP
NT seq 1620 nt   +upstreamnt  +downstreamnt
atggacctcgaagtggaatcagcagacgtgattcgtctgatcatgcagtatctgaaggaa
aataatttgcaccgcactctggcgatgcttcaagaggagacagcagtctctcttcacacg
gtcgacagcatcgacagcttcatctccgacatcaccaacggccagtgggatatagtgctg
ctagcaatccagtatctgaagcttcctgacaagctgctcatcgagctgtacgaacagatt
gtgctggagttgattgagttgggtgagctgggagctgctcaatgtttactaaagcagacc
gaccccatgatcatgctgaagcacactcaacctgagcgctactcgcacctggagaccctc
ctcagcaagccgtactttgactcgcaagaggcatatccagtgggcagcagtaaagagaag
cgcagattggctattgctcaagcttttgcaggagaggtctgcttggtgccaccttctcgt
ctcatggctcttctgggccagggccgtatatgtgagggtgctttatacaggttacaggaa
accaaagcactacggcagtttggctcattagcaatgctgtcgctgaagtggcagcagcac
cagggtctcttacctccaggtatgtctctggaactgttccgggggaaaggtgcattgaag
gacatggaggaagagcgcttccctactcagctcagtcgcctcataaagtttgggccaaag
tcccatgtagaatgtgcgcgattctctcctgatggacagtacttgattactggatctgtt
gatggtttcattgaagtctggaacttcaccactggtaaaattcggaaggatctgaagtac
caagctcaggatagtttcatgatgatggatgatgctgttctgtgtctggcagtaagtcac
gactccgacatgatcgcatctggagctcaggatggaaagatacaggtttggaggattctg
aacgggacgtgtctgaatagaatagaacgagcccacgacaaagcagtcacctgcgtctgc
ttcaacaaggacagcagtcagttattaagcggctcctttgaccagaccatcaggcttcat
ggtttgaaatcaggaaagatgctgaaggagtttagaggccatacggctcatataaatgat
gtcatcttctcacacgatgtccagcatgtcattagcgcctcagcagatggcacagtaaag
gtctggagcatgaaggcagtggattgcactcacacaataaaaacccccgacattcctgat
ggtacagacatcactgttaacaacgttgtgcttgtcccaaagactcctgagcacttcgtg
gtgtgcaataggaccaacacggtggttgttacgaacattcatggccaggtgatgaggagt
ttctgctcaggcgtaagagagggggcagactttgtttgctgcacgttgtctccacgtgga
gagtggatttattgcgtgggagaagactatgtgctgtactgcttcagcaccatcactggc
aaactagagagaaccctcacggtacatgaaaaagacgtggttgggataactcaccacccc
catcagaatctcatcgccacatacagcgaggatggcctactcaaactctggaagccttga

DBGET integrated database retrieval system